Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_006718908 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_001136070 17 2528 NP_001136071 17 2528 NP_001017973 17 2528 NP_001017974 17 2528 NP_004190 17 2528 XP_005272179 17 2528 XP_006714794 17 2528 XP_006714793 17 2528 XP_006714792 17 2528 XP_006714791 17 2528 XP_005272177 17 2528 XP_005272176 17 2528 XP_005272175 17 2528 XP_005272174 17 2528 XP_005272173 17 2528 NP_001138584 17 4312 NP_114153 17 4312 NP_006333 16 5631 NP_005528 16 5631 XP_006713918 16 5631 XP_005247986 16 5631 NP_006002 16 7355 NP_002903 15 9605 NP_001273361 15 9605 NP_001273360 15 9605 NP_073739 15 9605 NP_690042 15 9605 NP_056456 15 9605 XP_005250571 15 9605 XP_005250570 15 9605 XP_005250315 15 9605 XP_005267148 15 9605 XP_005267147 15 9605 XP_006715607 15 9605 XP_006715606 15 9605 XP_005272109 15 9605 XP_005263256 15 9605 NP_001103447 15 9605 NP_065930 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 KQMIK+LDA Sbjct: 2313 KQMIKKLDA 2321>XP_006718908 Length = 1708 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 KQMIK+LDA Sbjct: 965 KQMIKKLDA 973>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 KQMIK+LDA Sbjct: 1965 KQMIKKLDA 1973>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 KQMIK+LDA Sbjct: 2307 KQMIKKLDA 2315>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 KQMIK+LDA Sbjct: 2313 KQMIKKLDA 2321>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 KQMIK+LDA Sbjct: 2313 KQMIKKLDA 2321>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 KQMIK+LDA Sbjct: 2313 KQMIKKLDA 2321>NP_001136070 Length = 533 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>NP_001136071 Length = 535 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>NP_001017973 Length = 533 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>NP_001017974 Length = 533 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>NP_004190 Length = 535 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>XP_005272179 Length = 466 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>XP_006714794 Length = 507 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>XP_006714793 Length = 533 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>XP_006714792 Length = 533 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>XP_006714791 Length = 535 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>XP_005272177 Length = 535 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>XP_005272176 Length = 535 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>XP_005272175 Length = 535 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>XP_005272174 Length = 535 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>XP_005272173 Length = 535 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q++KQLDA Sbjct: 190 EQVLKQLDA 198>NP_001138584 Length = 543 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 KQ+++QL+A Sbjct: 527 KQLVQQLEA 535>NP_114153 Length = 301 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQMIKQLDA 9 K M+KQL+A Sbjct: 292 KMMMKQLEA 300>NP_006333 Length = 838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q+IK++DA Sbjct: 103 QQLIKEVDA 111>NP_005528 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KQMIKQLD 8 KQ++K+LD Sbjct: 188 KQILKELD 195>XP_006713918 Length = 830 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q+IK++DA Sbjct: 103 QQLIKEVDA 111>XP_005247986 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KQMIKQLDA 9 +Q+IK++DA Sbjct: 103 QQLIKEVDA 111>NP_006002 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KQMIKQLDA 9 KQ++K LDA Sbjct: 98 KQILKFLDA 106>NP_002903 Length = 3130 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMIKQLD 8 QM++QLD Sbjct: 2529 QMLEQLD 2535>NP_001273361 Length = 3052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMIKQLD 8 QM++QLD Sbjct: 2451 QMLEQLD 2457>NP_001273360 Length = 3052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMIKQLD 8 QM++QLD Sbjct: 2451 QMLEQLD 2457>NP_073739 Length = 1430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMIKQLDA 9 QM+K +DA Sbjct: 811 QMLKTIDA 818>NP_690042 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQMIKQLDA 9 KQ+ KQL A Sbjct: 139 KQLAKQLPA 147>NP_056456 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQMIKQLDA 9 KQ+ KQL A Sbjct: 148 KQLAKQLPA 156>XP_005250571 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KQMIKQLD 8 K+MI++LD Sbjct: 619 KEMIQKLD 626>XP_005250570 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KQMIKQLD 8 K+MI++LD Sbjct: 700 KEMIQKLD 707>XP_005250315 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KQMIKQLDA 9 KQ+ KQL A Sbjct: 63 KQLAKQLPA 71>XP_005267148 Length = 2679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMIKQLD 8 QM++QLD Sbjct: 2529 QMLEQLD 2535>XP_005267147 Length = 2689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMIKQLD 8 QM++QLD Sbjct: 2529 QMLEQLD 2535>XP_006715607 Length = 3052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMIKQLD 8 QM++QLD Sbjct: 2451 QMLEQLD 2457>XP_006715606 Length = 3130 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QMIKQLD 8 QM++QLD Sbjct: 2529 QMLEQLD 2535>XP_005272109 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QMIKQLDA 9 QM+K +DA Sbjct: 811 QMLKTIDA 818>XP_005263256 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QMIKQLDA 9 Q+IK+LD+ Sbjct: 757 QIIKELDS 764>NP_001103447 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QMIKQLDA 9 Q+IK+LD+ Sbjct: 757 QIIKELDS 764>NP_065930 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KQMIKQLD 8 K+MI++LD Sbjct: 751 KEMIQKLD 758Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.128 0.308 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 344,130 Number of extensions: 585 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |