Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 665 NP_001075109 19 665 XP_006723719 18 1482 NP_001360 16 5631 NP_690856 16 5631 NP_001010872 16 5631 XP_006715085 16 5631 XP_005248319 16 5631 XP_006712581 16 5631 XP_005246132 16 5631 XP_006723648 16 7355 XP_005260800 16 7355 XP_006723647 16 7355 XP_006723646 16 7355 XP_005260799 16 7355 XP_006723645 16 7355 XP_006723644 16 7355 XP_006714730 16 7355 NP_002535 16 7355 NP_001092877 16 7355 NP_004658 15 9605 NP_001181966 15 9605 NP_001071174 15 9605 NP_036519 15 9605 NP_001258468 15 9605 XP_005260640 15 9605 XP_005260639 15 9605 XP_006723716 15 9605 XP_006723715 15 9605 XP_006723714 15 9605 XP_006723713 15 9605 XP_006723712 15 9605 XP_006723711 15 9605 XP_006723710 15 9605 XP_006723709 15 9605 XP_006720790 15 9605 XP_005268334 15 9605 XP_005268333 15 9605 XP_006720789 15 9605 XP_006715535 15 9605 XP_006714541 15 9605 NP_003601 15 9605 NP_001015885 15 9605>NP_008835 Length = 4128 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KNLSSNKAI 9 KNLSSN+AI Sbjct: 838 KNLSSNEAI 846>NP_001075109 Length = 4097 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KNLSSNKAI 9 KNLSSN+AI Sbjct: 838 KNLSSNEAI 846>XP_006723719 Length = 311 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 KNLSSNKAI 9 +NLSSNK+I Sbjct: 271 ENLSSNKSI 279>NP_001360 Length = 4624 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 KN+S NK I Sbjct: 1108 KNVSENKEI 1116>NP_690856 Length = 802 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 KNL+ NK I Sbjct: 513 KNLAGNKRI 521>NP_001010872 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KNLSSNKA 8 +NLS NKA Sbjct: 787 ENLSKNKA 794>XP_006715085 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KNLSSNKA 8 +NLS NKA Sbjct: 787 ENLSKNKA 794>XP_005248319 Length = 4609 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 KN+S NK I Sbjct: 1093 KNVSENKEI 1101>XP_006712581 Length = 1047 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KNLSSNKA 8 +NLSSN A Sbjct: 634 RNLSSNSA 641>XP_005246132 Length = 1047 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KNLSSNKA 8 +NLSSN A Sbjct: 634 RNLSSNSA 641>XP_006723648 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 KNL NKA+ Sbjct: 294 KNLYLNKAV 302>XP_005260800 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 KNL NKA+ Sbjct: 370 KNLYLNKAV 378>XP_006723647 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 KNL NKA+ Sbjct: 481 KNLYLNKAV 489>XP_006723646 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 KNL NKA+ Sbjct: 543 KNLYLNKAV 551>XP_005260799 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 KNL NKA+ Sbjct: 556 KNLYLNKAV 564>XP_006723645 Length = 777 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 KNL NKA+ Sbjct: 562 KNLYLNKAV 570>XP_006723644 Length = 801 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 KNL NKA+ Sbjct: 586 KNLYLNKAV 594>XP_006714730 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLSSNKAI 9 NLS NKA+ Sbjct: 300 NLSLNKAL 307>NP_002535 Length = 440 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NLSSNK 7 NLSSNK Sbjct: 152 NLSSNK 157>NP_001092877 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 KNL NKA+ Sbjct: 537 KNLYLNKAV 545>NP_004658 Length = 4834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLSSNKAI 9 NL+SN++I Sbjct: 3742 NLASNRSI 3749>NP_001181966 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSSNKAI 9 LSSN+AI Sbjct: 600 LSSNRAI 606>NP_001071174 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSSNKAI 9 LSSN+AI Sbjct: 600 LSSNRAI 606>NP_036519 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 KN+ SNK + Sbjct: 527 KNILSNKTL 535>NP_001258468 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 +NLSSN I Sbjct: 271 ENLSSNSEI 279>XP_005260640 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLSSNKAI 9 +LSSN+AI Sbjct: 152 DLSSNQAI 159>XP_005260639 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLSSNKAI 9 +LSSN+AI Sbjct: 180 DLSSNQAI 187>XP_006723716 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 +NLSSN I Sbjct: 271 ENLSSNSEI 279>XP_006723715 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 +NLSSN I Sbjct: 271 ENLSSNSEI 279>XP_006723714 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 +NLSSN I Sbjct: 271 ENLSSNSEI 279>XP_006723713 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 +NLSSN I Sbjct: 271 ENLSSNSEI 279>XP_006723712 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 +NLSSN I Sbjct: 186 ENLSSNSEI 194>XP_006723711 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 +NLSSN I Sbjct: 271 ENLSSNSEI 279>XP_006723710 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 +NLSSN I Sbjct: 271 ENLSSNSEI 279>XP_006723709 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNLSSNKAI 9 +NLSSN I Sbjct: 271 ENLSSNSEI 279>XP_006720790 Length = 4748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLSSNKAI 9 NL+SN++I Sbjct: 3656 NLASNRSI 3663>XP_005268334 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLSSNKAI 9 NL+SN++I Sbjct: 3704 NLASNRSI 3711>XP_005268333 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLSSNKAI 9 NL+SN++I Sbjct: 3704 NLASNRSI 3711>XP_006720789 Length = 4829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLSSNKAI 9 NL+SN++I Sbjct: 3737 NLASNRSI 3744>XP_006715535 Length = 946 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LSSNKAI 9 LSSN+AI Sbjct: 642 LSSNRAI 648>XP_006714541 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KNLSSNK 7 +NL+SNK Sbjct: 361 RNLTSNK 367>NP_003601 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLSSNKAI 9 +LSSN+AI Sbjct: 114 DLSSNQAI 121>NP_001015885 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLSSNKAI 9 +LSSN+AI Sbjct: 114 DLSSNQAI 121Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.108 0.247 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 383,201 Number of extensions: 625 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |