Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 869 NP_001263689 19 869 NP_001119584 19 869 NP_001119586 19 869 NP_001263625 19 869 NP_001119590 19 869 NP_001263690 19 869 NP_001119585 19 869 NP_001263624 19 869 NP_005138 17 3301 NP_001128582 17 3301 NP_009098 17 4312 NP_005086 17 4312 XP_005271388 17 4312 XP_006711098 17 4312 XP_006711097 17 4312 XP_005271387 17 4312 XP_005271385 17 4312 NP_001273730 16 5631 NP_001273727 16 5631 NP_001273726 16 5631 NP_001273725 16 5631 NP_001273728 16 5631 NP_001273729 16 5631 NP_054783 16 5631 NP_065107 16 7355 XP_005253773 16 7355 NP_056142 15 9605 NP_067675 15 9605 NP_071406 15 9605 NP_775182 15 9605 NP_001158221 15 9605 NP_001159365 15 9605 NP_001273638 15 9605 NP_005060 15 9605 NP_057422 15 9605 NP_001116295 15 9605 NP_005059 15 9605 XP_005268050 15 9605 XP_005268049 15 9605 XP_005268048 15 9605 XP_005267157 15 9605 XP_006711311 15 9605 XP_005245106 15 9605 NP_001128251 15 9605 NP_036219 15 9605 NP_033664 15 9605>NP_000537 Length = 393 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMFYQLAKT 9 KMF QLAKT Sbjct: 132 KMFCQLAKT 140>NP_001263689 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMFYQLAKT 9 KMF QLAKT Sbjct: 93 KMFCQLAKT 101>NP_001119584 Length = 393 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMFYQLAKT 9 KMF QLAKT Sbjct: 132 KMFCQLAKT 140>NP_001119586 Length = 341 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMFYQLAKT 9 KMF QLAKT Sbjct: 132 KMFCQLAKT 140>NP_001263625 Length = 302 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMFYQLAKT 9 KMF QLAKT Sbjct: 93 KMFCQLAKT 101>NP_001119590 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMFYQLAKT 9 KMF QLAKT Sbjct: 93 KMFCQLAKT 101>NP_001263690 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMFYQLAKT 9 KMF QLAKT Sbjct: 93 KMFCQLAKT 101>NP_001119585 Length = 346 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMFYQLAKT 9 KMF QLAKT Sbjct: 132 KMFCQLAKT 140>NP_001263624 Length = 307 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KMFYQLAKT 9 KMF QLAKT Sbjct: 93 KMFCQLAKT 101>NP_005138 Length = 480 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KMFYQLAK 8 K +YQLAK Sbjct: 111 KAYYQLAK 118>NP_001128582 Length = 453 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KMFYQLAK 8 K +YQLAK Sbjct: 111 KAYYQLAK 118>NP_009098 Length = 1325 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MFYQLAK 8 +FYQ+AK Sbjct: 552 LFYQMAK 558>NP_005086 Length = 1548 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MFYQLAK 8 +FYQ+AK Sbjct: 809 LFYQMAK 815>XP_005271388 Length = 1224 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MFYQLAK 8 +FYQ+AK Sbjct: 485 LFYQMAK 491>XP_006711098 Length = 1516 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MFYQLAK 8 +FYQ+AK Sbjct: 777 LFYQMAK 783>XP_006711097 Length = 1542 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MFYQLAK 8 +FYQ+AK Sbjct: 803 LFYQMAK 809>XP_005271387 Length = 1545 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MFYQLAK 8 +FYQ+AK Sbjct: 806 LFYQMAK 812>XP_005271385 Length = 1551 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MFYQLAK 8 +FYQ+AK Sbjct: 812 LFYQMAK 818>NP_001273730 Length = 145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KMFYQLAKT 9 K FY AKT Sbjct: 10 KQFYSKAKT 18>NP_001273727 Length = 223 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KMFYQLAKT 9 K FY AKT Sbjct: 10 KQFYSKAKT 18>NP_001273726 Length = 223 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KMFYQLAKT 9 K FY AKT Sbjct: 10 KQFYSKAKT 18>NP_001273725 Length = 223 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KMFYQLAKT 9 K FY AKT Sbjct: 10 KQFYSKAKT 18>NP_001273728 Length = 223 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KMFYQLAKT 9 K FY AKT Sbjct: 10 KQFYSKAKT 18>NP_001273729 Length = 145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KMFYQLAKT 9 K FY AKT Sbjct: 10 KQFYSKAKT 18>NP_054783 Length = 223 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KMFYQLAKT 9 K FY AKT Sbjct: 10 KQFYSKAKT 18>NP_065107 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KMFYQLA 7 +MFYQL+ Sbjct: 527 EMFYQLS 533>XP_005253773 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KMFYQLA 7 +MFYQL+ Sbjct: 484 EMFYQLS 490>NP_056142 Length = 1016 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KMFYQLAK 8 KM++QL K Sbjct: 261 KMYHQLKK 268>NP_067675 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KMFYQLA 7 ++FYQ+A Sbjct: 154 RLFYQIA 160>NP_071406 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FYQLAK 8 FY+LAK Sbjct: 41 FYELAK 46>NP_775182 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FYQLAK 8 FY+LAK Sbjct: 41 FYELAK 46>NP_001158221 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FYQLAK 8 FY+LAK Sbjct: 71 FYELAK 76>NP_001159365 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FYQLAK 8 FY+LAK Sbjct: 41 FYELAK 46>NP_001273638 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KMFYQL 6 +MFYQL Sbjct: 231 QMFYQL 236>NP_005060 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FYQLAK 8 FY+LAK Sbjct: 20 FYELAK 25>NP_057422 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KMFYQLA 7 K+FY LA Sbjct: 168 KLFYDLA 174>NP_001116295 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KMFYQL 6 +MFYQL Sbjct: 412 QMFYQL 417>NP_005059 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FYQLAK 8 FY+LAK Sbjct: 20 FYELAK 25>XP_005268050 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FYQLAK 8 FY+LAK Sbjct: 41 FYELAK 46>XP_005268049 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FYQLAK 8 FY+LAK Sbjct: 78 FYELAK 83>XP_005268048 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FYQLAK 8 FY+LAK Sbjct: 78 FYELAK 83>XP_005267157 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FYQLAK 8 FY+LAK Sbjct: 20 FYELAK 25>XP_006711311 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KMFYQLAK 8 KM++QL K Sbjct: 195 KMYHQLKK 202>XP_005245106 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KMFYQLAK 8 KM++QL K Sbjct: 261 KMYHQLKK 268>NP_001128251 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KMFYQLA 7 K+FY LA Sbjct: 208 KLFYDLA 214>NP_036219 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KMFYQL 6 +MFYQL Sbjct: 405 QMFYQL 410>NP_033664 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FYQLAK 8 FY+LAK Sbjct: 20 FYELAK 25Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.132 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 360,430 Number of extensions: 444 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |