Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_776159 18 1935 NP_001273494 17 3301 NP_001273495 17 3301 NP_055547 17 3301 NP_068776 17 3301 XP_005256324 17 3301 XP_005256322 17 3301 XP_006719126 17 3301 XP_005253411 17 3301 XP_005253410 17 3301 XP_006719125 17 3301 XP_005253409 17 3301 NP_000229 17 4312 NP_001191727 17 4312 NP_742053 17 4312 NP_742054 17 4312 NP_004981 17 4312 NP_038476 17 4312 NP_872589 17 4312 XP_006719461 17 4312 XP_006716040 17 4312 NP_001019831 16 5631 NP_004336 16 5631 NP_003938 16 5631 NP_079089 16 5631 XP_006713880 16 5631 XP_006713879 16 5631 XP_006713878 16 5631 XP_006713877 16 5631 XP_006713876 16 5631 XP_006713875 16 5631 XP_006713874 16 5631 XP_006713873 16 5631 XP_005271280 16 5631 XP_006710968 16 5631 NP_000512 16 7355 NP_005575 16 7355 NP_065385 16 7355 NP_619651 16 7355 NP_001185797 15 9605 NP_005177 15 9605 NP_001185798 15 9605 NP_001229342 15 9605 NP_009049 15 9605 NP_150375 15 9605 NP_787954 15 9605 NP_059130 15 9605 NP_001096045 15 9605 NP_001136248 15 9605 NP_006248 15 9605 NP_001269574 15 9605 NP_001269573 15 9605 NP_077016 15 9605 NP_997719 15 9605 NP_110406 15 9605 NP_001265848 15 9605 NP_001265849 15 9605 NP_775115 15 9605 NP_775185 15 9605 XP_005261913 15 9605 XP_005261910 15 9605 XP_005261905 15 9605 XP_005254520 15 9605 XP_005254442 15 9605 XP_006718761 15 9605 XP_005252554 15 9605 XP_006717528 15 9605 XP_005252553 15 9605 XP_006714558 15 9605 NP_002364 15 9605 NP_004852 15 9605>NP_776159 Length = 402 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KLRIRDFMR 9 +LR++DF+R Sbjct: 189 RLRLKDFLR 197>NP_001273494 Length = 411 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIRDFMR 9 L +RDFMR Sbjct: 93 LALRDFMR 100>NP_001273495 Length = 401 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIRDFMR 9 L +RDFMR Sbjct: 93 LALRDFMR 100>NP_055547 Length = 411 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIRDFMR 9 L +RDFMR Sbjct: 93 LALRDFMR 100>NP_068776 Length = 703 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLRIRDFMR 9 K RI+DF+R Sbjct: 301 KARIQDFVR 309>XP_005256324 Length = 301 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIRDFMR 9 L +RDFMR Sbjct: 93 LALRDFMR 100>XP_005256322 Length = 411 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIRDFMR 9 L +RDFMR Sbjct: 93 LALRDFMR 100>XP_006719126 Length = 626 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLRIRDFMR 9 K RI+DF+R Sbjct: 224 KARIQDFVR 232>XP_005253411 Length = 630 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLRIRDFMR 9 K RI+DF+R Sbjct: 228 KARIQDFVR 236>XP_005253410 Length = 686 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLRIRDFMR 9 K RI+DF+R Sbjct: 284 KARIQDFVR 292>XP_006719125 Length = 703 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLRIRDFMR 9 K RI+DF+R Sbjct: 301 KARIQDFVR 309>XP_005253409 Length = 703 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLRIRDFMR 9 K RI+DF+R Sbjct: 301 KARIQDFVR 309>NP_000229 Length = 1159 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRIRDFMR 9 LR+R+F+R Sbjct: 678 LRVREFIR 685>NP_001191727 Length = 548 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRIRDFMR 9 LR+R+F+R Sbjct: 338 LRVREFIR 345>NP_742053 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRIRDFMR 9 LR+R+F+R Sbjct: 678 LRVREFIR 685>NP_742054 Length = 819 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRIRDFMR 9 LR+R+F+R Sbjct: 338 LRVREFIR 345>NP_004981 Length = 900 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLRIRDFMR 9 K+RIRD +R Sbjct: 698 KVRIRDALR 706>NP_038476 Length = 1556 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KLRIRDFM 8 +LR+RDF+ Sbjct: 976 ELRLRDFL 983>NP_872589 Length = 1524 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KLRIRDFM 8 +LR+RDF+ Sbjct: 944 ELRLRDFL 951>XP_006719461 Length = 666 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KLRIRDFMR 9 K+RIRD +R Sbjct: 464 KVRIRDALR 472>XP_006716040 Length = 1137 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRIRDFMR 9 LR+R+F+R Sbjct: 656 LRVREFIR 663>NP_001019831 Length = 2986 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KLRIRDFMR 9 ++RI+DF+R Sbjct: 623 EVRIQDFVR 631>NP_004336 Length = 173 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIRDFMR 9 RI+DF+R Sbjct: 159 RIKDFLR 165>NP_003938 Length = 1663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KLRIRDFMR 9 ++RI+DF+R Sbjct: 623 EVRIQDFVR 631>NP_079089 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIRDFMR 9 LRIR+F R Sbjct: 461 LRIREFYR 468>XP_006713880 Length = 1530 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KLRIRDFMR 9 ++RI+DF+R Sbjct: 625 EVRIQDFVR 633>XP_006713879 Length = 1656 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KLRIRDFMR 9 ++RI+DF+R Sbjct: 625 EVRIQDFVR 633>XP_006713878 Length = 1665 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KLRIRDFMR 9 ++RI+DF+R Sbjct: 625 EVRIQDFVR 633>XP_006713877 Length = 2956 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KLRIRDFMR 9 ++RI+DF+R Sbjct: 625 EVRIQDFVR 633>XP_006713876 Length = 2966 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KLRIRDFMR 9 ++RI+DF+R Sbjct: 625 EVRIQDFVR 633>XP_006713875 Length = 2975 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KLRIRDFMR 9 ++RI+DF+R Sbjct: 625 EVRIQDFVR 633>XP_006713874 Length = 2979 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KLRIRDFMR 9 ++RI+DF+R Sbjct: 625 EVRIQDFVR 633>XP_006713873 Length = 2988 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KLRIRDFMR 9 ++RI+DF+R Sbjct: 625 EVRIQDFVR 633>XP_005271280 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIRDFMR 9 LRIR+F R Sbjct: 461 LRIREFYR 468>XP_006710968 Length = 579 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIRDFMR 9 LRIR+F R Sbjct: 461 LRIREFYR 468>NP_000512 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIRDFMR 9 +I+DFMR Sbjct: 366 KIQDFMR 372>NP_005575 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 KLRIRD 6 KLRIRD Sbjct: 159 KLRIRD 164>NP_065385 Length = 731 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLRIRDFM 8 +LR RDF+ Sbjct: 653 RLRFRDFV 660>NP_619651 Length = 384 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIRDFMR 9 RI+DF+R Sbjct: 88 RIQDFLR 94>NP_001185797 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LRIRDFMR 9 + RDFMR Sbjct: 336 MSFRDFMR 343>NP_005177 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LRIRDFMR 9 + RDFMR Sbjct: 336 MSFRDFMR 343>NP_001185798 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LRIRDFMR 9 + RDFMR Sbjct: 336 MSFRDFMR 343>NP_001229342 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLRIRDFM 8 KL+I DF+ Sbjct: 374 KLKIEDFI 381>NP_009049 Length = 3097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIRDFMR 9 RI+DF+R Sbjct: 655 RIQDFVR 661>NP_150375 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LRIRDFMR 9 LR+++F+R Sbjct: 681 LRVKEFIR 688>NP_787954 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLRIRDFMR 9 +LR+R+F R Sbjct: 618 RLRMRNFKR 626>NP_059130 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLRIRDFMR 9 +LR+R+F R Sbjct: 618 RLRMRNFKR 626>NP_001096045 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KLRIRDF 7 ++R+RDF Sbjct: 586 QIRVRDF 592>NP_001136248 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRIRDFMR 9 LR+ DFM+ Sbjct: 177 LRLADFMQ 184>NP_006248 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLRIRDFM 8 KL+I DF+ Sbjct: 374 KLKIEDFI 381>NP_001269574 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLRIRDFM 8 KL+I DF+ Sbjct: 249 KLKIEDFI 256>NP_001269573 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLRIRDFM 8 KL+I DF+ Sbjct: 338 KLKIEDFI 345>NP_077016 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRIRDFMR 9 LR+ DFM+ Sbjct: 222 LRLADFMQ 229>NP_997719 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KLRIRDFM 8 KL++ DF+ Sbjct: 131 KLKVEDFL 138>NP_110406 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LRIRDFMR 9 LR+++F+R Sbjct: 530 LRVKEFIR 537>NP_001265848 Length = 958 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LRIRDFMR 9 LR+++F+R Sbjct: 530 LRVKEFIR 537>NP_001265849 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LRIRDFMR 9 LR+++F+R Sbjct: 407 LRVKEFIR 414>NP_775115 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LRIRDFMR 9 LR+++F+R Sbjct: 477 LRVKEFIR 484>NP_775185 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LRIRDFMR 9 LR+++F+R Sbjct: 674 LRVKEFIR 681>XP_005261913 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IRDFMR 9 IRDF+R Sbjct: 417 IRDFLR 422>XP_005261910 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IRDFMR 9 IRDF+R Sbjct: 417 IRDFLR 422>XP_005261905 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IRDFMR 9 IRDF+R Sbjct: 417 IRDFLR 422>XP_005254520 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLRIRDFMR 9 +LR+R+F R Sbjct: 302 RLRMRNFKR 310>XP_005254442 Length = 3041 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KLRIRDFMR 9 KLR DF+R Sbjct: 520 KLRHLDFLR 528>XP_006718761 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LRIRDFMR 9 + RDFMR Sbjct: 336 MSFRDFMR 343>XP_005252554 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLRIRDFM 8 KL+I DF+ Sbjct: 408 KLKIEDFI 415>XP_006717528 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLRIRDFM 8 KL+I DF+ Sbjct: 374 KLKIEDFI 381>XP_005252553 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLRIRDFM 8 KL+I DF+ Sbjct: 408 KLKIEDFI 415>XP_006714558 Length = 2612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIRDFMR 9 RI+DF+R Sbjct: 170 RIQDFVR 176>NP_002364 Length = 2803 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KLRIRDFMR 9 KLR DF+R Sbjct: 282 KLRHLDFLR 290>NP_004852 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IRDFMR 9 IRDF+R Sbjct: 417 IRDFLR 422Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.355 0.162 0.466 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 476,267 Number of extensions: 854 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |