Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 390 NP_001035957 20 390 XP_006721991 20 390 XP_006721990 20 390 XP_006721989 20 390 XP_005258041 20 390 XP_006721988 20 390 XP_006721987 20 390 XP_006721986 20 390 XP_005258040 20 390 XP_006721985 20 390 NP_002849 17 4312 XP_005251971 17 4312 XP_005271146 17 4312 XP_006710865 17 4312 XP_005271145 17 4312 NP_001116146 17 4312 NP_995581 17 4312 NP_001230481 16 5631 NP_001138328 16 7355 NP_001138329 16 7355 NP_060529 16 7355 NP_060643 16 7355 NP_005119 16 7355 XP_006724131 16 7355 XP_005253763 16 7355 XP_005253762 16 7355 XP_006719048 16 7355 XP_005253761 16 7355 NP_001001914 16 7355 NP_996809 15 9605 NP_065184 15 9605 NP_036417 15 9605 NP_073579 15 9605 XP_006716153 15 9605 XP_005250594 15 9605 XP_005250593 15 9605 XP_006716152 15 9605 XP_005250591 15 9605 XP_006715114 15 9605 XP_005249053 15 9605 XP_005249052 15 9605 XP_006715113 15 9605 NP_258441 15 9605 NP_258442 15 9605 NP_036479 15 9605>NP_000258 Length = 2818 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KLEV LYMF Sbjct: 686 KLEVALYMF 694>NP_001035957 Length = 2839 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KLEV LYMF Sbjct: 686 KLEVALYMF 694>XP_006721991 Length = 1632 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KLEV LYMF Sbjct: 696 KLEVALYMF 704>XP_006721990 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KLEV LYMF Sbjct: 696 KLEVALYMF 704>XP_006721989 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KLEV LYMF Sbjct: 696 KLEVALYMF 704>XP_005258041 Length = 2836 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KLEV LYMF Sbjct: 686 KLEVALYMF 694>XP_006721988 Length = 2846 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KLEV LYMF Sbjct: 696 KLEVALYMF 704>XP_006721987 Length = 2849 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KLEV LYMF Sbjct: 696 KLEVALYMF 704>XP_006721986 Length = 2854 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KLEV LYMF Sbjct: 683 KLEVALYMF 691>XP_005258040 Length = 2857 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KLEV LYMF Sbjct: 686 KLEVALYMF 694>XP_006721985 Length = 2867 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KLEV LYMF Sbjct: 696 KLEVALYMF 704>NP_002849 Length = 659 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 L++VLY+F Sbjct: 212 LDIVLYIF 219>XP_005251971 Length = 316 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 LEVVL++F Sbjct: 23 LEVVLFVF 30>XP_005271146 Length = 628 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 L++VLY+F Sbjct: 181 LDIVLYIF 188>XP_006710865 Length = 644 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 L++VLY+F Sbjct: 197 LDIVLYIF 204>XP_005271145 Length = 659 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 L++VLY+F Sbjct: 212 LDIVLYIF 219>NP_001116146 Length = 236 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 L++VLY+F Sbjct: 212 LDIVLYIF 219>NP_995581 Length = 316 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 LEVVL++F Sbjct: 23 LEVVLFVF 30>NP_001230481 Length = 114 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEVVLYMF 9 L VVL+MF Sbjct: 107 LSVVLFMF 114>NP_001138328 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KL+V L++F Sbjct: 425 KLDVYLFLF 433>NP_001138329 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KL+V L++F Sbjct: 393 KLDVYLFLF 401>NP_060529 Length = 1075 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EVVLYMF 9 EVVLY F Sbjct: 561 EVVLYAF 567>NP_060643 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KL+V L++F Sbjct: 425 KLDVYLFLF 433>NP_005119 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LEVVLYMF 9 LE+VL+ F Sbjct: 247 LEIVLFFF 254>XP_006724131 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LEVVLYMF 9 LE+VL+ F Sbjct: 247 LEIVLFFF 254>XP_005253763 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KL+V L++F Sbjct: 425 KLDVYLFLF 433>XP_005253762 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KL+V L++F Sbjct: 425 KLDVYLFLF 433>XP_006719048 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KL+V L++F Sbjct: 411 KLDVYLFLF 419>XP_005253761 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 KL+V L++F Sbjct: 425 KLDVYLFLF 433>NP_001001914 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLEVVLYMF 9 +LE VL++F Sbjct: 22 RLEAVLFVF 30>NP_996809 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KLEVVLYMF 9 +LEV +Y F Sbjct: 383 RLEVAMYPF 391>NP_065184 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KLEVVLYMF 9 +LEV +Y F Sbjct: 417 RLEVAMYPF 425>NP_036417 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVVLYMF 9 EVVL++F Sbjct: 122 EVVLFLF 128>NP_073579 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LEVVLY 7 LEVVLY Sbjct: 1017 LEVVLY 1022>XP_006716153 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LEVVLY 7 LEVVLY Sbjct: 336 LEVVLY 341>XP_005250594 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LEVVLY 7 LEVVLY Sbjct: 1002 LEVVLY 1007>XP_005250593 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LEVVLY 7 LEVVLY Sbjct: 1055 LEVVLY 1060>XP_006716152 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LEVVLY 7 LEVVLY Sbjct: 1058 LEVVLY 1063>XP_005250591 Length = 1207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LEVVLY 7 LEVVLY Sbjct: 1067 LEVVLY 1072>XP_006715114 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 +EV++Y+F Sbjct: 116 MEVLMYIF 123>XP_005249053 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 +EV++Y+F Sbjct: 149 MEVLMYIF 156>XP_005249052 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 +EV++Y+F Sbjct: 149 MEVLMYIF 156>XP_006715113 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 +EV++Y+F Sbjct: 193 MEVLMYIF 200>NP_258441 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 +EV++Y+F Sbjct: 183 MEVLMYIF 190>NP_258442 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 +EV++Y+F Sbjct: 149 MEVLMYIF 156>NP_036479 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LEVVLYMF 9 +EV++Y+F Sbjct: 193 MEVLMYIF 200Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.343 0.156 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 391,891 Number of extensions: 461 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |