Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 20 509 NP_002072 18 1935 NP_055086 17 2528 XP_005274498 17 2528 NP_006150 17 3301 NP_001138582 17 3301 NP_001138581 17 3301 NP_001138580 17 3301 NP_001138579 17 3301 XP_005268962 17 3301 NP_076404 16 5631 NP_073579 16 5631 XP_006716153 16 5631 XP_005250594 16 5631 XP_005250593 16 5631 XP_006716152 16 5631 XP_005250591 16 5631 NP_835231 16 7355 NP_002214 16 7355 XP_006719127 16 7355 XP_006713679 16 7355 XP_006713678 16 7355 XP_005247487 16 7355 XP_005247486 16 7355 NP_004083 15 9605 NP_001129203 15 9605 NP_079544 15 9605 NP_078921 15 9605 NP_060341 15 9605 NP_001243391 15 9605 NP_001243389 15 9605 NP_001243392 15 9605 NP_001243385 15 9605 XP_006720324 15 9605 XP_005268158 15 9605 XP_006716625 15 9605 XP_006716463 15 9605 XP_006716462 15 9605 XP_005272073 15 9605 XP_005272072 15 9605 XP_005245194 15 9605 XP_005244820 15 9605 XP_006710778 15 9605 NP_055040 15 9605 NP_001131141 15 9605>NP_000312 Length = 928 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KLEVRLYYR 9 KL VRLYYR Sbjct: 447 KLGVRLYYR 455>NP_002072 Length = 558 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EVRLYYR 9 E+RLYYR Sbjct: 147 ELRLYYR 153>NP_055086 Length = 696 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLEVRLYYR 9 K+E+ L+YR Sbjct: 382 KIEIMLFYR 390>XP_005274498 Length = 696 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KLEVRLYYR 9 K+E+ L+YR Sbjct: 382 KIEIMLFYR 390>NP_006150 Length = 816 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EVRLYYR 9 EVRL+YR Sbjct: 124 EVRLHYR 130>NP_001138582 Length = 839 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EVRLYYR 9 EVRL+YR Sbjct: 147 EVRLHYR 153>NP_001138581 Length = 815 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EVRLYYR 9 EVRL+YR Sbjct: 123 EVRLHYR 129>NP_001138580 Length = 816 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EVRLYYR 9 EVRL+YR Sbjct: 124 EVRLHYR 130>NP_001138579 Length = 866 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EVRLYYR 9 EVRL+YR Sbjct: 174 EVRLHYR 180>XP_005268962 Length = 816 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EVRLYYR 9 EVRL+YR Sbjct: 124 EVRLHYR 130>NP_076404 Length = 358 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVRLYY 8 EVR+YY Sbjct: 348 EVRIYY 353>NP_073579 Length = 1154 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEVRLYYR 9 LEV LYY+ Sbjct: 1017 LEVVLYYK 1024>XP_006716153 Length = 476 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEVRLYYR 9 LEV LYY+ Sbjct: 336 LEVVLYYK 343>XP_005250594 Length = 1142 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEVRLYYR 9 LEV LYY+ Sbjct: 1002 LEVVLYYK 1009>XP_005250593 Length = 1195 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEVRLYYR 9 LEV LYY+ Sbjct: 1055 LEVVLYYK 1062>XP_006716152 Length = 1198 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEVRLYYR 9 LEV LYY+ Sbjct: 1058 LEVVLYYK 1065>XP_005250591 Length = 1207 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEVRLYYR 9 LEV LYY+ Sbjct: 1067 LEVVLYYK 1074>NP_835231 Length = 263 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVRLYYR 9 EVRL+Y+ Sbjct: 140 EVRLFYQ 146>NP_002214 Length = 2701 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LEVRLYYR 9 LEV YYR Sbjct: 724 LEVLTYYR 731>XP_006719127 Length = 1865 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LEVRLYYR 9 LEV YYR Sbjct: 724 LEVLTYYR 731>XP_006713679 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVRLYYR 9 EVRL+Y+ Sbjct: 138 EVRLFYQ 144>XP_006713678 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVRLYYR 9 EVRL+Y+ Sbjct: 162 EVRLFYQ 168>XP_005247487 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVRLYYR 9 EVRL+Y+ Sbjct: 201 EVRLFYQ 207>XP_005247486 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVRLYYR 9 EVRL+Y+ Sbjct: 213 EVRLFYQ 219>NP_004083 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KLEVRLYY 8 KLE +L+Y Sbjct: 257 KLEKKLFY 264>NP_001129203 Length = 153 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVRLYY 8 +VRLYY Sbjct: 41 KVRLYY 46>NP_079544 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LEVRLYY 8 LE++LY+ Sbjct: 86 LEIKLYF 92>NP_078921 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVRLYY 8 +VRLYY Sbjct: 41 KVRLYY 46>NP_060341 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KLEVRLYY 8 +LE++ YY Sbjct: 147 ELEIKAYY 154>NP_001243391 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KLEVRLYY 8 +LE++ YY Sbjct: 49 ELEIKAYY 56>NP_001243389 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KLEVRLYY 8 +LE++ YY Sbjct: 118 ELEIKAYY 125>NP_001243392 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KLEVRLYY 8 +LE++ YY Sbjct: 46 ELEIKAYY 53>NP_001243385 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KLEVRLYY 8 +LE++ YY Sbjct: 153 ELEIKAYY 160>XP_006720324 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LEVRLYY 8 LE++LY+ Sbjct: 86 LEIKLYF 92>XP_005268158 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LEVRLYY 8 LE++LY+ Sbjct: 86 LEIKLYF 92>XP_006716625 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KLEVRLY 7 KLE RLY Sbjct: 65 KLEERLY 71>XP_006716463 Length = 230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVRLYY 8 +VRLYY Sbjct: 46 KVRLYY 51>XP_006716462 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVRLYY 8 +VRLYY Sbjct: 46 KVRLYY 51>XP_005272073 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KLEVRLYYR 9 KLE LY+R Sbjct: 937 KLERSLYHR 945>XP_005272072 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KLEVRLYYR 9 KLE LY+R Sbjct: 937 KLERSLYHR 945>XP_005245194 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LEVRLYY 8 LEVR YY Sbjct: 157 LEVRDYY 163>XP_005244820 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KLEVRLYY 8 +LE++ YY Sbjct: 49 ELEIKAYY 56>XP_006710778 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KLEVRLYY 8 +LE++ YY Sbjct: 147 ELEIKAYY 154>NP_055040 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KLEVRLYYR 9 K E+R Y+R Sbjct: 163 KAELRQYFR 171>NP_001131141 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LEVRLYY 8 LEVR YY Sbjct: 122 LEVRDYY 128Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.152 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 492,689 Number of extensions: 732 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |