Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 19 665 NP_000170 19 665 XP_005264328 19 665 NP_060439 17 2528 XP_006712689 17 2528 XP_005263764 17 2528 NP_001191676 17 4312 NP_002904 17 4312 NP_056240 16 5631 XP_006712046 16 5631 XP_005266835 16 7355 XP_005268803 16 7355 XP_005268802 16 7355 XP_005268801 16 7355 XP_005268800 16 7355 XP_005268799 16 7355 XP_006717839 16 7355 XP_006717838 16 7355 XP_006717836 16 7355 XP_006717835 16 7355 NP_001004715 16 7355 NP_056090 16 7355 NP_073619 15 9605 NP_055426 15 9605 XP_006720119 15 9605 XP_006719255 15 9605 XP_006719254 15 9605 XP_006719253 15 9605 XP_006719252 15 9605 XP_006719251 15 9605 XP_006719250 15 9605 XP_005248757 15 9605 XP_006715468 15 9605 XP_005248756 15 9605 XP_006715467 15 9605 NP_689659 15 9605>NP_001268421 Length = 1230 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KKQRVISDS 9 KK+RVISDS Sbjct: 116 KKRRVISDS 124>NP_000170 Length = 1360 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KKQRVISDS 9 KK+RVISDS Sbjct: 246 KKRRVISDS 254>XP_005264328 Length = 1261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KKQRVISDS 9 KK+RVISDS Sbjct: 147 KKRRVISDS 155>NP_060439 Length = 819 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KKQRVISDS 9 KK RV+SD+ Sbjct: 409 KKSRVVSDA 417>XP_006712689 Length = 823 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KKQRVISDS 9 KK RV+SD+ Sbjct: 414 KKSRVVSDA 422>XP_005263764 Length = 824 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KKQRVISDS 9 KK RV+SD+ Sbjct: 414 KKSRVVSDA 422>NP_001191676 Length = 1148 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KKQRVISDS 9 KK+R+I DS Sbjct: 61 KKKRIIYDS 69>NP_002904 Length = 1147 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KKQRVISDS 9 KK+R+I DS Sbjct: 61 KKKRIIYDS 69>NP_056240 Length = 1720 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKQRVISDS 9 K+QR+I +S Sbjct: 811 KRQRIIEES 819>XP_006712046 Length = 1612 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KKQRVISDS 9 K+QR+I +S Sbjct: 703 KRQRIIEES 711>XP_005266835 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KQRVISDS 9 KQ+V++DS Sbjct: 79 KQKVLADS 86>XP_005268803 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQRVISD 8 K+RVISD Sbjct: 520 KKRVISD 526>XP_005268802 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQRVISD 8 K+RVISD Sbjct: 521 KKRVISD 527>XP_005268801 Length = 985 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQRVISD 8 K+RVISD Sbjct: 332 KKRVISD 338>XP_005268800 Length = 986 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQRVISD 8 K+RVISD Sbjct: 333 KKRVISD 339>XP_005268799 Length = 1174 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQRVISD 8 K+RVISD Sbjct: 521 KKRVISD 527>XP_006717839 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KKQRVISD 8 KKQ+ ISD Sbjct: 19 KKQKPISD 26>XP_006717838 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KKQRVISD 8 KKQ+ ISD Sbjct: 19 KKQKPISD 26>XP_006717836 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KKQRVISD 8 KKQ+ ISD Sbjct: 19 KKQKPISD 26>XP_006717835 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KKQRVISD 8 KKQ+ ISD Sbjct: 19 KKQKPISD 26>NP_001004715 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KKQRVIS 7 KKQ+VIS Sbjct: 118 KKQKVIS 124>NP_056090 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQRVISD 8 K+RVISD Sbjct: 520 KKRVISD 526>NP_073619 Length = 1183 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KKQRVISDS 9 KKQR SD+ Sbjct: 885 KKQRETSDT 893>NP_055426 Length = 5596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKQRVISD 8 +KQR +SD Sbjct: 4122 QKQRALSD 4129>XP_006720119 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKQRVISD 8 +KQ V+SD Sbjct: 211 QKQEVVSD 218>XP_006719255 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KKQRVISDS 9 KKQR SD+ Sbjct: 187 KKQRETSDT 195>XP_006719254 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KKQRVISDS 9 KKQR SD+ Sbjct: 512 KKQRETSDT 520>XP_006719253 Length = 1031 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KKQRVISDS 9 KKQR SD+ Sbjct: 733 KKQRETSDT 741>XP_006719252 Length = 1031 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KKQRVISDS 9 KKQR SD+ Sbjct: 733 KKQRETSDT 741>XP_006719251 Length = 1116 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KKQRVISDS 9 KKQR SD+ Sbjct: 818 KKQRETSDT 826>XP_006719250 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KKQRVISDS 9 KKQR SD+ Sbjct: 843 KKQRETSDT 851>XP_005248757 Length = 3591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKQRVISD 8 +KQR +SD Sbjct: 2117 QKQRALSD 2124>XP_006715468 Length = 3744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKQRVISD 8 +KQR +SD Sbjct: 2270 QKQRALSD 2277>XP_005248756 Length = 3905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKQRVISD 8 +KQR +SD Sbjct: 2431 QKQRALSD 2438>XP_006715467 Length = 5550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKQRVISD 8 +KQR +SD Sbjct: 4122 QKQRALSD 4129>NP_689659 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KKQRVISD 8 +KQ V+SD Sbjct: 211 QKQEVVSD 218Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.119 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 493,656 Number of extensions: 727 Number of successful extensions: 36 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 36 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |