Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1482 XP_005271621 18 1482 XP_006718907 18 1482 XP_006718906 18 1482 XP_005271619 18 1482 XP_005271618 18 1482 XP_005264808 17 2528 XP_005264807 17 2528 XP_005264806 17 2528 XP_005264805 17 2528 XP_005264804 17 2528 NP_000857 17 2528 NP_002635 16 7355 XP_006722005 16 7355 XP_005273220 16 7355 NP_001182311 15 9605 NP_001182310 15 9605 NP_055571 15 9605 NP_001008938 15 9605 NP_056178 15 9605 NP_001139799 15 9605 NP_001139798 15 9605 NP_056104 15 9605 XP_005276774 15 9605 XP_005262562 15 9605 XP_005254316 15 9605 XP_005276159 15 9605>NP_000042 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KILVSLTM 8 KILVSLTM Sbjct: 610 KILVSLTM 617>XP_005271621 Length = 2708 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KILVSLTM 8 KILVSLTM Sbjct: 262 KILVSLTM 269>XP_006718907 Length = 3050 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KILVSLTM 8 KILVSLTM Sbjct: 610 KILVSLTM 617>XP_006718906 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KILVSLTM 8 KILVSLTM Sbjct: 610 KILVSLTM 617>XP_005271619 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KILVSLTM 8 KILVSLTM Sbjct: 610 KILVSLTM 617>XP_005271618 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KILVSLTM 8 KILVSLTM Sbjct: 610 KILVSLTM 617>XP_005264808 Length = 366 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 KILVSLTMN 9 KILVSLT++ Sbjct: 23 KILVSLTLS 31>XP_005264807 Length = 366 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 KILVSLTMN 9 KILVSLT++ Sbjct: 23 KILVSLTLS 31>XP_005264806 Length = 366 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 KILVSLTMN 9 KILVSLT++ Sbjct: 23 KILVSLTLS 31>XP_005264805 Length = 366 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 KILVSLTMN 9 KILVSLT++ Sbjct: 23 KILVSLTLS 31>XP_005264804 Length = 366 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 KILVSLTMN 9 KILVSLT++ Sbjct: 23 KILVSLTLS 31>NP_000857 Length = 366 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 KILVSLTMN 9 KILVSLT++ Sbjct: 23 KILVSLTLS 31>NP_002635 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LVSLTMN 9 LVSLT+N Sbjct: 526 LVSLTLN 532>XP_006722005 Length = 137 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILVSLTMN 9 + VSLTMN Sbjct: 45 VSVSLTMN 52>XP_005273220 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LVSLTMN 9 LVSLT+N Sbjct: 526 LVSLTLN 532>NP_001182311 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VSLTMN 9 VSLTMN Sbjct: 28 VSLTMN 33>NP_001182310 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VSLTMN 9 VSLTMN Sbjct: 28 VSLTMN 33>NP_055571 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KILVSLTMN 9 KILV T+N Sbjct: 914 KILVQQTLN 922>NP_001008938 Length = 2032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KILVSLTMN 9 KILV T+N Sbjct: 914 KILVQQTLN 922>NP_056178 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KILVSLTMN 9 K+L +TMN Sbjct: 264 KLLTPITMN 272>NP_001139799 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KILVSLTMN 9 K+L +TMN Sbjct: 264 KLLTPITMN 272>NP_001139798 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KILVSLTMN 9 K+L +TMN Sbjct: 264 KLLTPITMN 272>NP_056104 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KILVSLTMN 9 KILVSL N Sbjct: 76 KILVSLLEN 84>XP_005276774 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KILVSLTMN 9 KI+VSL+ N Sbjct: 39 KIIVSLSHN 47>XP_005262562 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KILVSLTMN 9 KI+VSL+ N Sbjct: 39 KIIVSLSHN 47>XP_005254316 Length = 886 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KILVSLTMN 9 KILVSL N Sbjct: 87 KILVSLLEN 95>XP_005276159 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KILVSLTMN 9 KI+VSL+ N Sbjct: 39 KIIVSLSHN 47Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.132 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 282,691 Number of extensions: 319 Number of successful extensions: 27 Number of sequences better than 10000.0: 27 Number of HSP's gapped: 27 Number of HSP's successfully gapped: 27 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |