Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 299 NP_671714 20 299 XP_006715890 20 299 XP_005250160 20 299 XP_005250159 20 299 NP_055935 17 4312 NP_067652 17 4312 XP_005271152 17 4312 XP_005271151 17 4312 NP_060647 16 5631 NP_057121 16 5631 XP_006714086 16 5631 XP_006714085 16 5631 XP_006714084 16 5631 NP_008970 16 7355 XP_006720074 16 7355 XP_005267344 16 7355 NP_110447 15 9605 NP_001185907 15 9605 NP_073570 15 9605 NP_001185908 15 9605 NP_001185909 15 9605 NP_056994 15 9605 NP_001018054 15 9605 NP_079328 15 9605 XP_006715287 15 9605 XP_006715286 15 9605 XP_006712837 15 9605 XP_005264407 15 9605 XP_005264406 15 9605 XP_005264405 15 9605 XP_005271177 15 9605>NP_005742 Length = 3907 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KIETIQFEK 9 KIET+QFEK Sbjct: 677 KIETMQFEK 685>NP_671714 Length = 3899 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KIETIQFEK 9 KIET+QFEK Sbjct: 677 KIETMQFEK 685>XP_006715890 Length = 3860 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KIETIQFEK 9 KIET+QFEK Sbjct: 677 KIETMQFEK 685>XP_005250160 Length = 3939 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KIETIQFEK 9 KIET+QFEK Sbjct: 677 KIETMQFEK 685>XP_005250159 Length = 3952 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KIETIQFEK 9 KIET+QFEK Sbjct: 677 KIETMQFEK 685>NP_055935 Length = 4169 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIETIQFEK 9 KIE I+F+K Sbjct: 3711 KIEQIKFDK 3719>NP_067652 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIETIQFEK 9 K+E +QFE+ Sbjct: 148 KVEKLQFEE 156>XP_005271152 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIETIQFEK 9 K+E +QFE+ Sbjct: 148 KVEKLQFEE 156>XP_005271151 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KIETIQFEK 9 K+E +QFE+ Sbjct: 148 KVEKLQFEE 156>NP_060647 Length = 1770 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KIETIQFEK 9 K ET+ FEK Sbjct: 1510 KRETLMFEK 1518>NP_057121 Length = 253 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KIETIQFEK 9 +IET+Q EK Sbjct: 170 RIETLQKEK 178>XP_006714086 Length = 1690 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KIETIQFEK 9 K ET+ FEK Sbjct: 1430 KRETLMFEK 1438>XP_006714085 Length = 1690 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KIETIQFEK 9 K ET+ FEK Sbjct: 1430 KRETLMFEK 1438>XP_006714084 Length = 1753 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KIETIQFEK 9 K ET+ FEK Sbjct: 1510 KRETLMFEK 1518>NP_008970 Length = 1174 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIETIQFE 8 K ETIQF+ Sbjct: 276 KEETIQFQ 283>XP_006720074 Length = 1051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIETIQFE 8 K ETIQF+ Sbjct: 153 KEETIQFQ 160>XP_005267344 Length = 1174 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KIETIQFE 8 K ETIQF+ Sbjct: 276 KEETIQFQ 283>NP_110447 Length = 957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KIETIQFE 8 K ET+QF+ Sbjct: 395 KEETVQFD 402>NP_001185907 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KIETIQFEK 9 K+E + FEK Sbjct: 122 KLEPVVFEK 130>NP_073570 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KIETIQFEK 9 K+E + FEK Sbjct: 152 KLEPVVFEK 160>NP_001185908 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KIETIQFEK 9 K+E + FEK Sbjct: 147 KLEPVVFEK 155>NP_001185909 Length = 349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KIETIQFEK 9 K+E + FEK Sbjct: 72 KLEPVVFEK 80>NP_056994 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ETIQFEK 9 ET+QF K Sbjct: 424 ETLQFSK 430>NP_001018054 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KIETIQFEK 9 KIE FEK Sbjct: 205 KIEITHFEK 213>NP_079328 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KIETIQFEK 9 KIE FEK Sbjct: 318 KIEITHFEK 326>XP_006715287 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KIETIQFE 8 K ET+QF+ Sbjct: 395 KEETVQFD 402>XP_006715286 Length = 945 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KIETIQFE 8 K ET+QF+ Sbjct: 395 KEETVQFD 402>XP_006712837 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 KIETIQFEK 9 KIE FEK Sbjct: 318 KIEITHFEK 326>XP_005264407 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ETIQFEK 9 ET+QF K Sbjct: 265 ETLQFSK 271>XP_005264406 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ETIQFEK 9 ET+QF K Sbjct: 277 ETLQFSK 283>XP_005264405 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ETIQFEK 9 ET+QF K Sbjct: 424 ETLQFSK 430>XP_005271177 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KIETIQFEK 9 K+E + FEK Sbjct: 126 KLEPVVFEK 134Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.134 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 377,777 Number of extensions: 489 Number of successful extensions: 32 Number of sequences better than 10000.0: 32 Number of HSP's gapped: 32 Number of HSP's successfully gapped: 32 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |