Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1935 NP_001035957 18 1935 XP_006721990 18 1935 XP_006721989 18 1935 XP_005258041 18 1935 XP_006721988 18 1935 XP_006721987 18 1935 XP_006721986 18 1935 XP_005258040 18 1935 XP_006721985 18 1935 NP_060941 17 2528 XP_006717971 17 3301 NP_065883 17 4312 NP_003310 17 4312 NP_597676 17 4312 NP_001243779 17 4312 NP_036325 17 4312 NP_596869 17 4312 XP_005246888 17 4312 XP_006712788 17 4312 XP_006712787 17 4312 XP_006712786 17 4312 XP_005245423 17 4312 XP_005245425 17 4312 NP_001254479 17 4312 NP_597681 17 4312 NP_002652 16 7355 NP_004347 16 7355 NP_653226 16 7355 NP_001269065 16 7355 NP_001916 16 7355 NP_001138587 16 7355 XP_006722562 16 7355 XP_006722561 16 7355 XP_006722560 16 7355 XP_006722559 16 7355 XP_005266781 16 7355 XP_006722558 16 7355 XP_005266780 16 7355 XP_005266779 16 7355 XP_005248831 16 7355 XP_005248830 16 7355 XP_006715361 16 7355 XP_006711799 16 7355 NP_060651 16 7355 NP_002854 15 9605 NP_000262 15 9605 NP_003089 15 9605 NP_001156597 15 9605 NP_001156596 15 9605 NP_001156592 15 9605 NP_001156602 15 9605 NP_001030008 15 9605 NP_663629 15 9605 NP_001156593 15 9605 NP_001156594 15 9605 NP_079384 15 9605 NP_055445 15 9605 XP_006726822 15 9605 XP_006725444 15 9605 XP_005276974 15 9605 XP_005260574 15 9605 XP_006722542 15 9605 XP_005258336 15 9605 XP_005258335 15 9605 XP_005258334 15 9605 XP_006722328 15 9605 XP_006721018 15 9605 XP_005255053 15 9605>NP_000258 Length = 2818 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KCSKRLVFI 9 K SKRLVFI Sbjct: 1680 KGSKRLVFI 1688>NP_001035957 Length = 2839 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KCSKRLVFI 9 K SKRLVFI Sbjct: 1701 KGSKRLVFI 1709>XP_006721990 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KCSKRLVFI 9 K SKRLVFI Sbjct: 1711 KGSKRLVFI 1719>XP_006721989 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KCSKRLVFI 9 K SKRLVFI Sbjct: 1711 KGSKRLVFI 1719>XP_005258041 Length = 2836 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KCSKRLVFI 9 K SKRLVFI Sbjct: 1680 KGSKRLVFI 1688>XP_006721988 Length = 2846 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KCSKRLVFI 9 K SKRLVFI Sbjct: 1690 KGSKRLVFI 1698>XP_006721987 Length = 2849 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KCSKRLVFI 9 K SKRLVFI Sbjct: 1711 KGSKRLVFI 1719>XP_006721986 Length = 2854 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KCSKRLVFI 9 K SKRLVFI Sbjct: 1698 KGSKRLVFI 1706>XP_005258040 Length = 2857 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KCSKRLVFI 9 K SKRLVFI Sbjct: 1701 KGSKRLVFI 1709>XP_006721985 Length = 2867 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KCSKRLVFI 9 K SKRLVFI Sbjct: 1711 KGSKRLVFI 1719>NP_060941 Length = 426 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KCSKRLVFI 9 KC KR V+I Sbjct: 130 KCEKRSVYI 138>XP_006717971 Length = 559 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 CSKRLVF 8 CS RLVF Sbjct: 546 CSSRLVF 552>NP_065883 Length = 1237 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 CSKRLVF 8 C++RLVF Sbjct: 566 CARRLVF 572>NP_003310 Length = 26926 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KCSKRLVFI 9 KC K+ V+I Sbjct: 23715 KCGKKAVYI 23723>NP_597676 Length = 27051 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KCSKRLVFI 9 KC K+ V+I Sbjct: 23840 KCGKKAVYI 23848>NP_001243779 Length = 34350 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KCSKRLVFI 9 KC K+ V+I Sbjct: 31139 KCGKKAVYI 31147>NP_036325 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KCSKRLV 7 KCS RLV Sbjct: 506 KCSNRLV 512>NP_596869 Length = 33423 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KCSKRLVFI 9 KC K+ V+I Sbjct: 30212 KCGKKAVYI 30220>XP_005246888 Length = 22663 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KCSKRLVFI 9 KC K+ V+I Sbjct: 19452 KCGKKAVYI 19460>XP_006712788 Length = 24022 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KCSKRLVFI 9 KC K+ V+I Sbjct: 20811 KCGKKAVYI 20819>XP_006712787 Length = 33978 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KCSKRLVFI 9 KC K+ V+I Sbjct: 30767 KCGKKAVYI 30775>XP_006712786 Length = 35484 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KCSKRLVFI 9 KC K+ V+I Sbjct: 32273 KCGKKAVYI 32281>XP_005245423 Length = 1246 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 CSKRLVF 8 C++RLVF Sbjct: 575 CARRLVF 581>XP_005245425 Length = 1299 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 CSKRLVF 8 C++RLVF Sbjct: 628 CARRLVF 634>NP_001254479 Length = 35991 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KCSKRLVFI 9 KC K+ V+I Sbjct: 32780 KCGKKAVYI 32788>NP_597681 Length = 27118 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KCSKRLVFI 9 KC K+ V+I Sbjct: 23907 KCGKKAVYI 23915>NP_002652 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KCSKRL 6 KC+KRL Sbjct: 1248 KCNKRL 1253>NP_004347 Length = 236 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KCSKRLVFI 9 KC K L+F+ Sbjct: 8 KCIKYLLFV 16>NP_653226 Length = 1081 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CSKRLVFI 9 C +RL+F+ Sbjct: 550 CLRRLIFL 557>NP_001269065 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KCSKRL 6 KCSK+L Sbjct: 232 KCSKKL 237>NP_001916 Length = 97 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 CSKRLVF 8 CS RLVF Sbjct: 65 CSCRLVF 71>NP_001138587 Length = 358 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KCSKRLVF 8 KC KR+ F Sbjct: 127 KCKKRVQF 134>XP_006722562 Length = 1060 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSKRLVF 8 C+K LVF Sbjct: 649 CTKNLVF 655>XP_006722561 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSKRLVF 8 C+K LVF Sbjct: 649 CTKNLVF 655>XP_006722560 Length = 1295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSKRLVF 8 C+K LVF Sbjct: 649 CTKNLVF 655>XP_006722559 Length = 1297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSKRLVF 8 C+K LVF Sbjct: 649 CTKNLVF 655>XP_005266781 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSKRLVF 8 C+K LVF Sbjct: 649 CTKNLVF 655>XP_006722558 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSKRLVF 8 C+K LVF Sbjct: 649 CTKNLVF 655>XP_005266780 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSKRLVF 8 C+K LVF Sbjct: 649 CTKNLVF 655>XP_005266779 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSKRLVF 8 C+K LVF Sbjct: 649 CTKNLVF 655>XP_005248831 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KCSKRL 6 KCSK+L Sbjct: 134 KCSKKL 139>XP_005248830 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KCSKRL 6 KCSK+L Sbjct: 232 KCSKKL 237>XP_006715361 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 KCSKRL 6 KCSK+L Sbjct: 232 KCSKKL 237>XP_006711799 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CSKRLVFI 9 C +RL+F+ Sbjct: 560 CLRRLIFL 567>NP_060651 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSKRLVF 8 C+K LVF Sbjct: 649 CTKNLVF 655>NP_002854 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KCSKRLVFI 9 KC KR+ ++ Sbjct: 78 KCPKRVYYL 86>NP_000262 Length = 1278 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSKRLVFI 9 CS LVF+ Sbjct: 364 CSSGLVFV 371>NP_003089 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSKRLVFI 9 C K +VFI Sbjct: 482 CPKTIVFI 489>NP_001156597 Length = 116 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CSKRLV 7 CSKR++ Sbjct: 104 CSKRII 109>NP_001156596 Length = 143 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CSKRLV 7 CSKR++ Sbjct: 104 CSKRII 109>NP_001156592 Length = 166 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CSKRLV 7 CSKR++ Sbjct: 127 CSKRII 132>NP_001156602 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CSKRLV 7 CSKR++ Sbjct: 104 CSKRII 109>NP_001030008 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CSKRLV 7 CSKR++ Sbjct: 127 CSKRII 132>NP_663629 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CSKRLV 7 CSKR++ Sbjct: 127 CSKRII 132>NP_001156593 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CSKRLV 7 CSKR++ Sbjct: 127 CSKRII 132>NP_001156594 Length = 228 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CSKRLV 7 CSKR++ Sbjct: 104 CSKRII 109>NP_079384 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CSKRLV 7 CS+RLV Sbjct: 6 CSRRLV 11>NP_055445 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSKRLVF 8 CSK L+F Sbjct: 620 CSKTLLF 626>XP_006726822 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KCSKRLVFI 9 KCS +FI Sbjct: 291 KCSNIFIFI 299>XP_006725444 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KCSKRLVFI 9 KCS +FI Sbjct: 216 KCSNIFIFI 224>XP_005276974 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KCSKRLVFI 9 KCS +FI Sbjct: 277 KCSNIFIFI 285>XP_005260574 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSKRLVFI 9 C K +VFI Sbjct: 481 CPKTIVFI 488>XP_006722542 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSKRLVFI 9 CS LVF+ Sbjct: 381 CSSGLVFV 388>XP_005258336 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSKRLVFI 9 CS LVF+ Sbjct: 364 CSSGLVFV 371>XP_005258335 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSKRLVFI 9 CS LVF+ Sbjct: 381 CSSGLVFV 388>XP_005258334 Length = 1303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CSKRLVFI 9 CS LVF+ Sbjct: 381 CSSGLVFV 388>XP_006722328 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 KCSKRLVFI 9 KCS +FI Sbjct: 291 KCSNIFIFI 299>XP_006721018 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CSKRLV 7 CS+RLV Sbjct: 6 CSRRLV 11>XP_005255053 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CSKRLVF 8 CSK L+F Sbjct: 620 CSKTLLF 626Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.149 0.471 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 620,787 Number of extensions: 1112 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |