Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_065681 22 103 NP_066124 22 103 XP_006717999 22 103 NP_003233 17 2528 NP_001020018 17 2528 XP_006713379 17 2528 NP_001257309 17 3301 NP_001607 17 3301 NP_892014 17 3301 NP_001265509 17 3301 NP_001265508 17 3301 XP_006718499 17 3301 XP_006718497 17 3301 XP_006718496 17 3301 XP_006718495 17 3301 XP_005273826 17 3301 XP_005273825 17 3301 XP_005273824 17 3301 XP_005273823 17 3301 XP_005273822 17 3301 XP_005263900 17 3301 NP_067055 17 4312 NP_689943 16 5631 XP_005266918 16 5631 NP_002146 16 7355 NP_065102 16 7355 XP_005266067 16 7355 NP_689490 16 7355 NP_109592 15 9605 NP_002839 15 9605 NP_996531 15 9605 NP_775862 15 9605 XP_006719978 15 9605 XP_005254087 15 9605 XP_005268859 15 9605 XP_006713374 15 9605 XP_005270777 15 9605 XP_006710615 15 9605 XP_005270776 15 9605 NP_694991 15 9605>NP_065681 Length = 1072 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KATAFHMKG 9 KATAFH+KG Sbjct: 740 KATAFHLKG 748>NP_066124 Length = 1114 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KATAFHMKG 9 KATAFH+KG Sbjct: 740 KATAFHLKG 748>XP_006717999 Length = 1207 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 KATAFHMKG 9 KATAFH+KG Sbjct: 833 KATAFHLKG 841>NP_003233 Length = 567 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TAFHMKG 9 TAFH KG Sbjct: 325 TAFHAKG 331>NP_001020018 Length = 592 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TAFHMKG 9 TAFH KG Sbjct: 350 TAFHAKG 356>XP_006713379 Length = 628 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TAFHMKG 9 TAFH KG Sbjct: 386 TAFHAKG 392>NP_001257309 Length = 598 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 KAT+F KG Sbjct: 63 KATSFEFKG 71>NP_001607 Length = 513 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TAFHMKG 9 TAFH KG Sbjct: 267 TAFHEKG 273>NP_892014 Length = 792 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 KAT+F KG Sbjct: 63 KATSFEFKG 71>NP_001265509 Length = 405 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TAFHMKG 9 TAFH KG Sbjct: 159 TAFHEKG 165>NP_001265508 Length = 513 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TAFHMKG 9 TAFH KG Sbjct: 267 TAFHEKG 273>XP_006718499 Length = 356 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 KAT+F KG Sbjct: 63 KATSFEFKG 71>XP_006718497 Length = 395 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 KAT+F KG Sbjct: 63 KATSFEFKG 71>XP_006718496 Length = 398 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 KAT+F KG Sbjct: 63 KATSFEFKG 71>XP_006718495 Length = 606 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 KAT+F KG Sbjct: 63 KATSFEFKG 71>XP_005273826 Length = 688 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 KAT+F KG Sbjct: 63 KATSFEFKG 71>XP_005273825 Length = 693 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 KAT+F KG Sbjct: 63 KATSFEFKG 71>XP_005273824 Length = 713 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 KAT+F KG Sbjct: 63 KATSFEFKG 71>XP_005273823 Length = 758 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 KAT+F KG Sbjct: 63 KATSFEFKG 71>XP_005273822 Length = 800 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 KAT+F KG Sbjct: 63 KATSFEFKG 71>XP_005263900 Length = 361 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TAFHMKG 9 TAFH KG Sbjct: 267 TAFHEKG 273>NP_067055 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AFHMKG 9 AFH+KG Sbjct: 104 AFHLKG 109>NP_689943 Length = 1257 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TAFHMKG 9 +AFHM G Sbjct: 1144 SAFHMSG 1150>XP_005266918 Length = 1298 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TAFHMKG 9 +AFHM G Sbjct: 1185 SAFHMSG 1191>NP_002146 Length = 643 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 +A FH+KG Sbjct: 545 EAHVFHVKG 553>NP_065102 Length = 498 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TAFHMK 8 TAFHM+ Sbjct: 213 TAFHMQ 218>XP_005266067 Length = 190 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TAFHMK 8 T FHMK Sbjct: 129 TVFHMK 134>NP_689490 Length = 234 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TAFHMK 8 T FHMK Sbjct: 173 TVFHMK 178>NP_109592 Length = 1216 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ATAFHM 7 ATAFH+ Sbjct: 27 ATAFHV 32>NP_002839 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ATAFHM 7 ATAFH+ Sbjct: 27 ATAFHV 32>NP_996531 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 AFHMKG 9 +FH+KG Sbjct: 152 SFHLKG 157>NP_775862 Length = 2344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 +AT FH +G Sbjct: 1297 RATFFHHQG 1305>XP_006719978 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 AFHMKG 9 +FH+KG Sbjct: 152 SFHLKG 157>XP_005254087 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 AFHMKG 9 +FH+KG Sbjct: 152 SFHLKG 157>XP_005268859 Length = 2361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KATAFHMKG 9 +AT FH +G Sbjct: 1314 RATFFHHQG 1322>XP_006713374 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KATAFHMK 8 KAT +H K Sbjct: 454 KATGWHFK 461>XP_005270777 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 AFHMKG 9 +FH+KG Sbjct: 224 SFHLKG 229>XP_006710615 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 AFHMKG 9 +FH+KG Sbjct: 196 SFHLKG 201>XP_005270776 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 AFHMKG 9 +FH+KG Sbjct: 196 SFHLKG 201>NP_694991 Length = 566 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 AFHMKG 9 +FH+KG Sbjct: 224 SFHLKG 229Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.126 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 435,443 Number of extensions: 353 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |