Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1482 XP_005271621 18 1482 XP_006718907 18 1482 XP_006718906 18 1482 XP_005271619 18 1482 XP_005271618 18 1482 NP_703148 18 1482 NP_001186068 17 4312 NP_067032 17 4312 NP_001186067 17 4312 NP_001278244 16 5631 NP_542437 16 5631 NP_061197 16 5631 NP_542435 16 5631 NP_542436 16 5631 NP_001138537 16 5631 NP_001130038 16 7355 NP_001265593 16 7355 NP_975011 16 7355 NP_003265 16 7355 NP_001265606 16 7355 NP_001265592 16 7355 NP_001265607 16 7355 NP_001265590 16 7355 NP_001265591 16 7355 XP_005261226 16 7355 XP_006724109 16 7355 XP_005261225 16 7355 XP_006723668 16 7355 XP_006723667 16 7355 XP_006723666 16 7355 XP_006723665 16 7355 XP_005260226 16 7355 XP_006723012 16 7355 XP_006723011 16 7355 XP_005260225 16 7355 XP_005260224 16 7355 XP_005260223 16 7355 NP_056385 15 9605 NP_001120703 15 9605 NP_543024 15 9605 XP_006723777 15 9605 XP_005260352 15 9605 XP_005250314 15 9605 NP_795363 15 9605>NP_000042 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 IYNRKSV 7 IYNRKSV Sbjct: 1147 IYNRKSV 1153>XP_005271621 Length = 2708 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 IYNRKSV 7 IYNRKSV Sbjct: 799 IYNRKSV 805>XP_006718907 Length = 3050 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 IYNRKSV 7 IYNRKSV Sbjct: 1141 IYNRKSV 1147>XP_006718906 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 IYNRKSV 7 IYNRKSV Sbjct: 1147 IYNRKSV 1153>XP_005271619 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 IYNRKSV 7 IYNRKSV Sbjct: 1147 IYNRKSV 1153>XP_005271618 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 IYNRKSV 7 IYNRKSV Sbjct: 1147 IYNRKSV 1153>NP_703148 Length = 1200 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IYNRKSVF 8 ++NRKSVF Sbjct: 539 VWNRKSVF 546>NP_001186068 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IYNRKSVFT 9 I+N KS FT Sbjct: 127 IFNLKSTFT 135>NP_067032 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IYNRKSVFT 9 I+N KS FT Sbjct: 127 IFNLKSTFT 135>NP_001186067 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IYNRKSVFT 9 I+N KS FT Sbjct: 127 IFNLKSTFT 135>NP_001278244 Length = 200 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IYNRKSVFT 9 IY+R VFT Sbjct: 26 IYSRVEVFT 34>NP_542437 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IYNRKSVF 8 +Y+R+S+F Sbjct: 112 LYDRRSIF 119>NP_061197 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IYNRKSVF 8 +Y+R+S+F Sbjct: 112 LYDRRSIF 119>NP_542435 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IYNRKSVF 8 +Y+R+S+F Sbjct: 112 LYDRRSIF 119>NP_542436 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IYNRKSVF 8 +Y+R+S+F Sbjct: 112 LYDRRSIF 119>NP_001138537 Length = 900 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYNRKSVF 8 +Y+RK+VF Sbjct: 875 MYSRKNVF 882>NP_001130038 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYNRKSVF 8 IYNRK+ + Sbjct: 66 IYNRKAKY 73>NP_001265593 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 510 FNRSSTFT 517>NP_975011 Length = 659 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 583 FNRSSTFT 590>NP_003265 Length = 1259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYNRKSVF 8 IY+++SVF Sbjct: 1001 IYSKQSVF 1008>NP_001265606 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 542 FNRSSTFT 549>NP_001265592 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 498 FNRSSTFT 505>NP_001265607 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 498 FNRSSTFT 505>NP_001265590 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 542 FNRSSTFT 549>NP_001265591 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 542 FNRSSTFT 549>XP_005261226 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYNRKSVF 8 IY+++SVF Sbjct: 712 IYSKQSVF 719>XP_006724109 Length = 1141 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYNRKSVF 8 IY+++SVF Sbjct: 1001 IYSKQSVF 1008>XP_005261225 Length = 1218 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYNRKSVF 8 IY+++SVF Sbjct: 960 IYSKQSVF 967>XP_006723668 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYNRKSVF 8 IYNRK+ + Sbjct: 66 IYNRKAKY 73>XP_006723667 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYNRKSVF 8 IYNRK+ + Sbjct: 66 IYNRKAKY 73>XP_006723666 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYNRKSVF 8 IYNRK+ + Sbjct: 66 IYNRKAKY 73>XP_006723665 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYNRKSVF 8 IYNRK+ + Sbjct: 66 IYNRKAKY 73>XP_005260226 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 415 FNRSSTFT 422>XP_006723012 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 498 FNRSSTFT 505>XP_006723011 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 498 FNRSSTFT 505>XP_005260225 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 498 FNRSSTFT 505>XP_005260224 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 498 FNRSSTFT 505>XP_005260223 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 555 FNRSSTFT 562>NP_056385 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 744 FNRPSTFT 751>NP_001120703 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 720 FNRPSTFT 727>NP_543024 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IYNRKSV 7 IYN KSV Sbjct: 520 IYNPKSV 526>XP_006723777 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IYNRKSV 7 IYN KSV Sbjct: 417 IYNPKSV 423>XP_005260352 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IYNRKSV 7 IYN KSV Sbjct: 524 IYNPKSV 530>XP_005250314 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YNRKSVFT 9 +NR S FT Sbjct: 293 FNRPSTFT 300>NP_795363 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IYNRKSVF 8 +YN+ SV+ Sbjct: 87 VYNQNSVY 94Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.138 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 440,432 Number of extensions: 867 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |