Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 509 NP_001035957 20 509 XP_006721990 20 509 XP_006721989 20 509 XP_005258041 20 509 XP_006721988 20 509 XP_006721987 20 509 XP_006721986 20 509 XP_005258040 20 509 XP_006721985 20 509 NP_006729 17 3301 NP_001257475 17 3301 NP_009131 17 3301 XP_005254913 17 3301 XP_005254912 17 3301 XP_005254911 17 3301 XP_005254910 17 3301 XP_005254909 17 3301 XP_005254908 17 3301 XP_005254907 17 3301 XP_005254906 17 3301 XP_005254905 17 3301 XP_005254904 17 3301 XP_005254903 17 3301 XP_005254902 17 3301 XP_005254901 17 3301 XP_005254900 17 3301 XP_005254899 17 3301 XP_005254898 17 3301 XP_005254897 17 3301 XP_006720441 17 3301 XP_006720440 17 3301 XP_006720439 17 3301 XP_005254896 17 3301 NP_057288 17 4312 XP_006717824 17 4312 NP_001139660 16 5631 NP_001073899 16 5631 NP_055297 16 5631 XP_005255950 16 5631 XP_005255949 16 5631 NP_001709 16 7355 NP_861525 16 7355 NP_001711 16 7355 NP_066551 16 7355 NP_001007594 15 9605 NP_000534 15 9605 XP_003960549 15 9605 XP_005253132 15 9605>NP_000258 Length = 2818 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IVQSIIHMR 9 IVQSIIH+R Sbjct: 1799 IVQSIIHIR 1807>NP_001035957 Length = 2839 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IVQSIIHMR 9 IVQSIIH+R Sbjct: 1820 IVQSIIHIR 1828>XP_006721990 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IVQSIIHMR 9 IVQSIIH+R Sbjct: 1830 IVQSIIHIR 1838>XP_006721989 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IVQSIIHMR 9 IVQSIIH+R Sbjct: 1830 IVQSIIHIR 1838>XP_005258041 Length = 2836 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IVQSIIHMR 9 IVQSIIH+R Sbjct: 1799 IVQSIIHIR 1807>XP_006721988 Length = 2846 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IVQSIIHMR 9 IVQSIIH+R Sbjct: 1809 IVQSIIHIR 1817>XP_006721987 Length = 2849 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IVQSIIHMR 9 IVQSIIH+R Sbjct: 1830 IVQSIIHIR 1838>XP_006721986 Length = 2854 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IVQSIIHMR 9 IVQSIIH+R Sbjct: 1817 IVQSIIHIR 1825>XP_005258040 Length = 2857 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IVQSIIHMR 9 IVQSIIH+R Sbjct: 1820 IVQSIIHIR 1828>XP_006721985 Length = 2867 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IVQSIIHMR 9 IVQSIIH+R Sbjct: 1830 IVQSIIHIR 1838>NP_006729 Length = 2817 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2525 VVQSVVHL 2532>NP_001257475 Length = 1434 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 1142 VVQSVVHL 1149>NP_009131 Length = 2813 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2521 VVQSVVHL 2528>XP_005254913 Length = 1441 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 1149 VVQSVVHL 1156>XP_005254912 Length = 1442 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 1150 VVQSVVHL 1157>XP_005254911 Length = 1473 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 1181 VVQSVVHL 1188>XP_005254910 Length = 1523 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 1231 VVQSVVHL 1238>XP_005254909 Length = 1536 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 1244 VVQSVVHL 1251>XP_005254908 Length = 1536 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 1244 VVQSVVHL 1251>XP_005254907 Length = 2590 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2298 VVQSVVHL 2305>XP_005254906 Length = 2675 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2383 VVQSVVHL 2390>XP_005254905 Length = 2793 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2501 VVQSVVHL 2508>XP_005254904 Length = 2802 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2510 VVQSVVHL 2517>XP_005254903 Length = 2820 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2528 VVQSVVHL 2535>XP_005254902 Length = 2835 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2543 VVQSVVHL 2550>XP_005254901 Length = 2842 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2550 VVQSVVHL 2557>XP_005254900 Length = 2843 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2551 VVQSVVHL 2558>XP_005254899 Length = 2861 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2569 VVQSVVHL 2576>XP_005254898 Length = 2874 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2582 VVQSVVHL 2589>XP_005254897 Length = 2876 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2584 VVQSVVHL 2591>XP_006720441 Length = 2881 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2589 VVQSVVHL 2596>XP_006720440 Length = 2882 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2590 VVQSVVHL 2597>XP_006720439 Length = 2882 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2590 VVQSVVHL 2597>XP_005254896 Length = 2883 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 +VQS++H+ Sbjct: 2591 VVQSVVHL 2598>NP_057288 Length = 429 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IVQSIIHMR 9 IVQ+++H++ Sbjct: 375 IVQTLVHLK 383>XP_006717824 Length = 417 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IVQSIIHMR 9 IVQ+++H++ Sbjct: 375 IVQTLVHLK 383>NP_001139660 Length = 571 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 I++SI+HM Sbjct: 148 IMRSIVHM 155>NP_001073899 Length = 576 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 I++SI+HM Sbjct: 153 IMRSIVHM 160>NP_055297 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 3/9 (33%), Positives = 9/9 (100%) Query: 1 IVQSIIHMR 9 I+Q+++H++ Sbjct: 371 IIQALVHLK 379>XP_005255950 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 I++SI+HM Sbjct: 149 IMRSIVHM 156>XP_005255949 Length = 575 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 I++SI+HM Sbjct: 152 IMRSIVHM 159>NP_001709 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 IVQ+++H+ Sbjct: 460 IVQTLVHL 467>NP_861525 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 I+QS++H+ Sbjct: 349 ILQSLVHL 356>NP_001711 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 I+QS++H+ Sbjct: 349 ILQSLVHL 356>NP_066551 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IVQSIIHM 8 IVQ+++H+ Sbjct: 401 IVQTLVHL 408>NP_001007594 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IVQSIIHM 8 + QSI+H+ Sbjct: 131 VCQSIVHL 138>NP_000534 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IVQSIIHM 8 + QSI+H+ Sbjct: 132 VCQSIVHL 139>XP_003960549 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 VQSIIHM 8 VQS++H+ Sbjct: 238 VQSVLHL 244>XP_005253132 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IVQSIIHM 8 + QSI+H+ Sbjct: 132 VCQSIVHL 139Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.347 0.147 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 439,993 Number of extensions: 617 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |