Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004651 17 4312 NP_001116137 17 4312 NP_001347 17 4312 NP_001180346 17 4312 NP_001180345 17 4312 NP_037518 17 4312 NP_998816 17 4312 NP_001119580 17 4312 NP_000330 17 4312 NP_001119579 17 4312 XP_006724941 17 4312 XP_005262621 17 4312 XP_006724940 17 4312 XP_005256176 17 4312 NP_001010854 16 5631 XP_005267424 16 5631 XP_006720122 16 5631 XP_006720121 16 5631 NP_001158220 16 7355 NP_001158219 16 7355 NP_009142 16 7355 NP_001158218 16 7355 XP_006719091 16 7355 XP_006719090 16 7355 NP_079035 15 9605 NP_742068 15 9605 NP_997205 15 9605 NP_001007596 15 9605 NP_001165906 15 9605 NP_036365 15 9605 XP_005251128 15 9605 XP_005251127 15 9605 XP_005251126 15 9605 XP_006711246 15 9605 XP_005244978 15 9605 XP_005244977 15 9605 XP_005244976 15 9605 XP_005244975 15 9605 NP_061160 15 9605>NP_004651 Length = 660 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 I LAVGR G Sbjct: 399 IFLAVGRVG 407>NP_001116137 Length = 660 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 I LAVGR G Sbjct: 399 IFLAVGRVG 407>NP_001347 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 I LAVGR G Sbjct: 401 IFLAVGRVG 409>NP_001180346 Length = 646 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 I LAVGR G Sbjct: 385 IFLAVGRVG 393>NP_001180345 Length = 661 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 I LAVGR G Sbjct: 401 IFLAVGRVG 409>NP_037518 Length = 477 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LAVGRTG 9 LAVG+TG Sbjct: 316 LAVGKTG 322>NP_998816 Length = 458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LAVGRTG 9 LAVG+TG Sbjct: 297 LAVGKTG 303>NP_001119580 Length = 1021 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 ITL +GR G Sbjct: 975 ITLPIGRKG 983>NP_000330 Length = 1030 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 ITL +GR G Sbjct: 984 ITLPIGRKG 992>NP_001119579 Length = 1029 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 ITL +GR G Sbjct: 983 ITLPIGRKG 991>XP_006724941 Length = 637 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 I LAVGR G Sbjct: 399 IFLAVGRVG 407>XP_005262621 Length = 657 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 I LAVGR G Sbjct: 396 IFLAVGRVG 404>XP_006724940 Length = 660 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 I LAVGR G Sbjct: 399 IFLAVGRVG 407>XP_005256176 Length = 1020 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 ITL +GR G Sbjct: 974 ITLPIGRKG 982>NP_001010854 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITLAVGRTG 9 +T+A+GR G Sbjct: 369 LTIALGRRG 377>XP_005267424 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITLAVGRTG 9 +T+A+GR G Sbjct: 111 LTIALGRRG 119>XP_006720122 Length = 820 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITLAVGRTG 9 +T+A+GR G Sbjct: 275 LTIALGRRG 283>XP_006720121 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITLAVGRTG 9 +T+A+GR G Sbjct: 377 LTIALGRRG 385>NP_001158220 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AVGRTG 9 A+GRTG Sbjct: 33 AIGRTG 38>NP_001158219 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AVGRTG 9 A+GRTG Sbjct: 33 AIGRTG 38>NP_009142 Length = 392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AVGRTG 9 A+GRTG Sbjct: 33 AIGRTG 38>NP_001158218 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AVGRTG 9 A+GRTG Sbjct: 33 AIGRTG 38>XP_006719091 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AVGRTG 9 A+GRTG Sbjct: 33 AIGRTG 38>XP_006719090 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AVGRTG 9 A+GRTG Sbjct: 33 AIGRTG 38>NP_079035 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 + +AVG TG Sbjct: 95 LLMAVGETG 103>NP_742068 Length = 1133 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITLAVGRTG 9 +T+A+ RTG Sbjct: 337 LTIALQRTG 345>NP_997205 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TLAVGRTG 9 T+A+GR G Sbjct: 247 TVALGRAG 254>NP_001007596 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TLAVGRTG 9 T+A+GR G Sbjct: 242 TVALGRAG 249>NP_001165906 Length = 988 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ITLAVGRTG 9 +++A+G TG Sbjct: 152 VSIALGNTG 160>NP_036365 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ITLAVGRTG 9 +++A+G TG Sbjct: 152 VSIALGNTG 160>XP_005251128 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 + +AVG TG Sbjct: 193 LLMAVGETG 201>XP_005251127 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 + +AVG TG Sbjct: 193 LLMAVGETG 201>XP_005251126 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ITLAVGRTG 9 + +AVG TG Sbjct: 193 LLMAVGETG 201>XP_006711246 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITLAVGRTG 9 +T+A+ RTG Sbjct: 337 LTIALQRTG 345>XP_005244978 Length = 1113 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITLAVGRTG 9 +T+A+ RTG Sbjct: 337 LTIALQRTG 345>XP_005244977 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITLAVGRTG 9 +T+A+ RTG Sbjct: 337 LTIALQRTG 345>XP_005244976 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITLAVGRTG 9 +T+A+ RTG Sbjct: 337 LTIALQRTG 345>XP_005244975 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITLAVGRTG 9 +T+A+ RTG Sbjct: 337 LTIALQRTG 345>NP_061160 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LAVGRTG 9 +AVG+TG Sbjct: 50 VAVGKTG 56Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.142 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 419,205 Number of extensions: 616 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |