Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_940852 17 4312 XP_005262137 17 4312 XP_006720905 17 4312 XP_006720904 17 4312 XP_005255159 17 4312 XP_006720903 17 4312 XP_006720902 17 4312 XP_006720901 17 4312 NP_001248339 16 7355 NP_003558 16 7355 NP_001248337 16 7355 NP_001248338 16 7355 NP_008995 16 7355 NP_001019831 16 7355 NP_001010940 16 7355 NP_003387 16 7355 XP_006725694 16 7355 XP_005257694 16 7355 XP_006713877 16 7355 XP_006713876 16 7355 XP_006713875 16 7355 XP_006713874 16 7355 XP_006713873 16 7355 NP_001257903 15 9605 NP_060130 15 9605 NP_001171869 15 9605 NP_671735 15 9605 NP_001171872 15 9605 NP_001171874 15 9605 NP_001171870 15 9605 NP_001171871 15 9605 NP_060564 15 9605 NP_112497 15 9605 NP_001123479 15 9605 NP_001123478 15 9605 NP_002085 15 9605 NP_997263 15 9605 NP_001159438 15 9605 XP_005260019 15 9605 XP_005260018 15 9605 XP_005260017 15 9605 XP_005260016 15 9605 XP_005260015 15 9605 XP_006722844 15 9605 XP_005260014 15 9605 XP_006722843 15 9605 XP_005260013 15 9605 XP_005260011 15 9605 XP_006721645 15 9605 XP_006721269 15 9605 XP_005255332 15 9605 XP_005255331 15 9605 XP_006716803 15 9605 XP_005251459 15 9605 NP_003773 15 9605>NP_940852 Length = 268 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ISARKGS 7 +SARKGS Sbjct: 127 VSARKGS 133>XP_005262137 Length = 271 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ISARKGS 7 +SARKGS Sbjct: 127 VSARKGS 133>XP_006720905 Length = 504 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISARKGSLT 9 ISAR+G+ T Sbjct: 53 ISARRGTFT 61>XP_006720904 Length = 512 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISARKGSLT 9 ISAR+G+ T Sbjct: 53 ISARRGTFT 61>XP_005255159 Length = 544 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISARKGSLT 9 ISAR+G+ T Sbjct: 53 ISARRGTFT 61>XP_006720903 Length = 557 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISARKGSLT 9 ISAR+G+ T Sbjct: 53 ISARRGTFT 61>XP_006720902 Length = 560 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISARKGSLT 9 ISAR+G+ T Sbjct: 53 ISARRGTFT 61>XP_006720901 Length = 568 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISARKGSLT 9 ISAR+G+ T Sbjct: 53 ISARRGTFT 61>NP_001248339 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ARKGSLT 9 AR+GSLT Sbjct: 182 AREGSLT 188>NP_003558 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ARKGSLT 9 AR+GSLT Sbjct: 273 AREGSLT 279>NP_001248337 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ARKGSLT 9 AR+GSLT Sbjct: 273 AREGSLT 279>NP_001248338 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ARKGSLT 9 AR+GSLT Sbjct: 273 AREGSLT 279>NP_008995 Length = 1289 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKGSLT 9 RKGSLT Sbjct: 464 RKGSLT 469>NP_001019831 Length = 2986 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKGSLT 9 RKGSLT Sbjct: 2161 RKGSLT 2166>NP_001010940 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKGSLT 9 RKGSLT Sbjct: 29 RKGSLT 34>NP_003387 Length = 357 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ARKGSLT 9 AR+GSLT Sbjct: 265 ARQGSLT 271>XP_006725694 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ARKGSLT 9 AR+GSLT Sbjct: 265 ARQGSLT 271>XP_005257694 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ARKGSLT 9 AR+GSLT Sbjct: 265 ARQGSLT 271>XP_006713877 Length = 2956 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKGSLT 9 RKGSLT Sbjct: 2131 RKGSLT 2136>XP_006713876 Length = 2966 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKGSLT 9 RKGSLT Sbjct: 2141 RKGSLT 2146>XP_006713875 Length = 2975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKGSLT 9 RKGSLT Sbjct: 2150 RKGSLT 2155>XP_006713874 Length = 2979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKGSLT 9 RKGSLT Sbjct: 2154 RKGSLT 2159>XP_006713873 Length = 2988 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKGSLT 9 RKGSLT Sbjct: 2163 RKGSLT 2168>NP_001257903 Length = 5121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ISARKGSLT 9 + +KGSLT Sbjct: 3102 VQPKKGSLT 3110>NP_060130 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISARKGSLT 9 +SA KGS T Sbjct: 572 VSAGKGSAT 580>NP_001171869 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARKGSL 8 ARKGSL Sbjct: 60 ARKGSL 65>NP_671735 Length = 168 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARKGSL 8 ARKGSL Sbjct: 43 ARKGSL 48>NP_001171872 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARKGSL 8 ARKGSL Sbjct: 43 ARKGSL 48>NP_001171874 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARKGSL 8 ARKGSL Sbjct: 32 ARKGSL 37>NP_001171870 Length = 184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARKGSL 8 ARKGSL Sbjct: 60 ARKGSL 65>NP_001171871 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARKGSL 8 ARKGSL Sbjct: 49 ARKGSL 54>NP_060564 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ISARKG 6 ISARKG Sbjct: 312 ISARKG 317>NP_112497 Length = 974 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SARKGSLT 9 S+RKGS++ Sbjct: 290 SSRKGSIS 297>NP_001123479 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ISARKG 6 ISARKG Sbjct: 183 ISARKG 188>NP_001123478 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ISARKG 6 ISARKG Sbjct: 320 ISARKG 325>NP_002085 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ISARKG 6 ISARKG Sbjct: 321 ISARKG 326>NP_997263 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SARKGS 7 SARKGS Sbjct: 212 SARKGS 217>NP_001159438 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SARKGSLT 9 S+RKGS++ Sbjct: 254 SSRKGSIS 261>XP_005260019 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISARKGSLT 9 +SA KGS T Sbjct: 482 VSAGKGSAT 490>XP_005260018 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISARKGSLT 9 +SA KGS T Sbjct: 573 VSAGKGSAT 581>XP_005260017 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISARKGSLT 9 +SA KGS T Sbjct: 573 VSAGKGSAT 581>XP_005260016 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISARKGSLT 9 +SA KGS T Sbjct: 573 VSAGKGSAT 581>XP_005260015 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISARKGSLT 9 +SA KGS T Sbjct: 573 VSAGKGSAT 581>XP_006722844 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISARKGSLT 9 +SA KGS T Sbjct: 579 VSAGKGSAT 587>XP_005260014 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISARKGSLT 9 +SA KGS T Sbjct: 592 VSAGKGSAT 600>XP_006722843 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISARKGSLT 9 +SA KGS T Sbjct: 592 VSAGKGSAT 600>XP_005260013 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISARKGSLT 9 +SA KGS T Sbjct: 592 VSAGKGSAT 600>XP_005260011 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISARKGSLT 9 +SA KGS T Sbjct: 604 VSAGKGSAT 612>XP_006721645 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SARKGSLT 9 S+RKGS++ Sbjct: 249 SSRKGSIS 256>XP_006721269 Length = 5138 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ISARKGSLT 9 + +KGSLT Sbjct: 3119 VQPKKGSLT 3127>XP_005255332 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ISARKG 6 ISARKG Sbjct: 213 ISARKG 218>XP_005255331 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ISARKG 6 ISARKG Sbjct: 214 ISARKG 219>XP_006716803 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARKGSL 8 ARKGSL Sbjct: 19 ARKGSL 24>XP_005251459 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ARKGSL 8 ARKGSL Sbjct: 19 ARKGSL 24>NP_003773 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISARKGSL 8 +SAR+G L Sbjct: 296 VSARRGGL 303Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.121 0.293 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,015 Number of extensions: 477 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |