Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 22 103 XP_006718908 22 103 XP_005271621 22 103 XP_006718907 22 103 XP_006718906 22 103 XP_005271619 22 103 XP_005271618 22 103 NP_004949 18 1135 XP_005263496 18 1135 XP_005263495 18 1135 NP_055907 18 1935 XP_005255242 18 1935 XP_005255241 18 1935 XP_005255240 18 1935 XP_005255239 18 1935 NP_008835 17 2528 NP_001075109 17 2528 NP_001231509 17 2528 NP_003487 17 2528 NP_001175 17 3301 NP_115892 17 3301 NP_001035269 17 3301 NP_004740 17 3301 NP_004175 17 3301 NP_776049 17 3301 NP_998811 17 3301 NP_998810 17 3301 NP_001248763 17 3301 XP_006720312 17 3301 XP_005268101 17 3301 XP_006720311 17 3301 NP_002556 17 4312 NP_689603 17 4312 XP_005264201 17 4312 NP_005447 16 5631 NP_037522 16 5631 NP_001129292 16 5631 NP_000765 16 5631 XP_006723116 16 5631 XP_006723115 16 5631 XP_005251926 16 5631 XP_005249801 16 5631 NP_861456 16 5631 NP_006209 16 7355 NP_001888 16 7355 NP_060832 16 7355 NP_003807 16 7355 XP_006713721 16 7355 NP_689574 16 7355 NP_689677 16 7355 NP_001269596 15 9605 NP_001269595 15 9605 NP_001025025 15 9605 NP_008940 15 9605 NP_001153350 15 9605 NP_001025022 15 9605 NP_001660 15 9605 NP_003710 15 9605 NP_001025023 15 9605 XP_005274573 15 9605 XP_005274572 15 9605 XP_005274571 15 9605 XP_005253308 15 9605 XP_005248681 15 9605 XP_005248680 15 9605 XP_006714790 15 9605 XP_005248678 15 9605 XP_006714789 15 9605 XP_006714788 15 9605 NP_002018 15 9605>NP_000042 Length = 3056 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IPFRLTRDI 9 +PFRLTRDI Sbjct: 2906 VPFRLTRDI 2914>XP_006718908 Length = 1708 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IPFRLTRDI 9 +PFRLTRDI Sbjct: 1558 VPFRLTRDI 1566>XP_005271621 Length = 2708 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IPFRLTRDI 9 +PFRLTRDI Sbjct: 2558 VPFRLTRDI 2566>XP_006718907 Length = 3050 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IPFRLTRDI 9 +PFRLTRDI Sbjct: 2900 VPFRLTRDI 2908>XP_006718906 Length = 3056 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IPFRLTRDI 9 +PFRLTRDI Sbjct: 2906 VPFRLTRDI 2914>XP_005271619 Length = 3056 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IPFRLTRDI 9 +PFRLTRDI Sbjct: 2906 VPFRLTRDI 2914>XP_005271618 Length = 3056 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IPFRLTRDI 9 +PFRLTRDI Sbjct: 2906 VPFRLTRDI 2914>NP_004949 Length = 2549 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 IPFRLTR 7 IPFRLTR Sbjct: 2375 IPFRLTR 2381>XP_005263496 Length = 2322 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 IPFRLTR 7 IPFRLTR Sbjct: 2148 IPFRLTR 2154>XP_005263495 Length = 2549 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 IPFRLTR 7 IPFRLTR Sbjct: 2375 IPFRLTR 2381>NP_055907 Length = 3661 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IPFRLTRDI 9 +PFR+T++I Sbjct: 2371 VPFRMTQNI 2379>XP_005255242 Length = 3609 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IPFRLTRDI 9 +PFR+T++I Sbjct: 2319 VPFRMTQNI 2327>XP_005255241 Length = 3637 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IPFRLTRDI 9 +PFR+T++I Sbjct: 2347 VPFRMTQNI 2355>XP_005255240 Length = 3663 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IPFRLTRDI 9 +PFR+T++I Sbjct: 2373 VPFRMTQNI 2381>XP_005255239 Length = 3689 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IPFRLTRDI 9 +PFR+T++I Sbjct: 2399 VPFRMTQNI 2407>NP_008835 Length = 4128 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IPFRLTR 7 +PFRLTR Sbjct: 3959 MPFRLTR 3965>NP_001075109 Length = 4097 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IPFRLTR 7 +PFRLTR Sbjct: 3928 MPFRLTR 3934>NP_001231509 Length = 3859 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IPFRLTRDI 9 +PFRLT +I Sbjct: 3727 VPFRLTPNI 3735>NP_003487 Length = 3830 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IPFRLTRDI 9 +PFRLT +I Sbjct: 3698 VPFRLTPNI 3706>NP_001175 Length = 2644 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IPFRLTRDI 9 +PFRLT ++ Sbjct: 2511 VPFRLTHNM 2519>NP_115892 Length = 340 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PFRLTR 7 PFRLTR Sbjct: 138 PFRLTR 143>NP_001035269 Length = 340 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PFRLTR 7 PFRLTR Sbjct: 138 PFRLTR 143>NP_004740 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PFRLTRDI 9 PF LT+D+ Sbjct: 287 PFSLTKDV 294>NP_004175 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRLTRDI 9 FR+TRD+ Sbjct: 317 FRMTRDV 323>NP_776049 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRLTRDI 9 FR+TRD+ Sbjct: 317 FRMTRDV 323>NP_998811 Length = 430 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRLTRDI 9 FR+TRD+ Sbjct: 276 FRMTRDV 282>NP_998810 Length = 430 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRLTRDI 9 FR+TRD+ Sbjct: 276 FRMTRDV 282>NP_001248763 Length = 642 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PFRLTRDI 9 PF LT+D+ Sbjct: 298 PFSLTKDV 305>XP_006720312 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRLTRDI 9 FR+TRD+ Sbjct: 317 FRMTRDV 323>XP_005268101 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRLTRDI 9 FR+TRD+ Sbjct: 317 FRMTRDV 323>XP_006720311 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRLTRDI 9 FR+TRD+ Sbjct: 317 FRMTRDV 323>NP_002556 Length = 365 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPFRLTRDI 9 +PF +TR I Sbjct: 259 VPFHITRTI 267>NP_689603 Length = 297 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IPFRLTRDI 9 IPF LT+ I Sbjct: 155 IPFNLTKTI 163>XP_005264201 Length = 251 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IPFRLTRDI 9 IPF LT+ I Sbjct: 155 IPFNLTKTI 163>NP_005447 Length = 711 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FRLTRDI 9 FRLT DI Sbjct: 33 FRLTHDI 39>NP_037522 Length = 1383 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IPFRLT 6 +PFRLT Sbjct: 1255 VPFRLT 1260>NP_001129292 Length = 1320 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IPFRLT 6 +PFRLT Sbjct: 1192 VPFRLT 1197>NP_000765 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IPFRLTRD 8 +P R+TRD Sbjct: 367 LPHRVTRD 374>XP_006723116 Length = 447 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IPFRLTRD 8 +P R+TRD Sbjct: 367 LPHRVTRD 374>XP_006723115 Length = 498 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IPFRLTRD 8 +P R+TRD Sbjct: 367 LPHRVTRD 374>XP_005251926 Length = 1383 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IPFRLT 6 +PFRLT Sbjct: 1255 VPFRLT 1260>XP_005249801 Length = 324 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IPFRLT 6 +PFRLT Sbjct: 88 VPFRLT 93>NP_861456 Length = 305 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IPFRLT 6 +PFRLT Sbjct: 69 VPFRLT 74>NP_006209 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IPFRLTRD 8 +PF LT+D Sbjct: 952 VPFVLTQD 959>NP_001888 Length = 2322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IPFRLTR 7 +P RLTR Sbjct: 1839 VPLRLTR 1845>NP_060832 Length = 197 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFRLTRDI 9 P RL RDI Sbjct: 7 PVRLERDI 14>NP_003807 Length = 819 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PFRLTRD 8 P+RLTR+ Sbjct: 48 PWRLTRE 54>XP_006713721 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IPFRLTRD 8 +PF LT+D Sbjct: 952 VPFVLTQD 959>NP_689574 Length = 161 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IPFRLTRD 8 IP RL RD Sbjct: 106 IPVRLLRD 113>NP_689677 Length = 208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPFRLTRDI 9 + FRL RD+ Sbjct: 55 VSFRLIRDL 63>NP_001269596 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PFRLTRDI 9 P RL RD+ Sbjct: 878 PLRLPRDL 885>NP_001269595 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PFRLTRDI 9 P RL RD+ Sbjct: 899 PLRLPRDL 906>NP_001025025 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PFRLTRD 8 P RLT+D Sbjct: 124 PMRLTQD 130>NP_008940 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRLTRD 8 FRLT+D Sbjct: 53 FRLTKD 58>NP_001153350 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRLTRD 8 FRLT+D Sbjct: 53 FRLTKD 58>NP_001025022 Length = 788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PFRLTRD 8 P RLT+D Sbjct: 124 PMRLTQD 130>NP_001660 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 IPFRLTRD 8 +PF LT D Sbjct: 176 MPFTLTND 183>NP_003710 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PFRLTRD 8 P RLT+D Sbjct: 124 PMRLTQD 130>NP_001025023 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PFRLTRD 8 P RLT+D Sbjct: 124 PMRLTQD 130>XP_005274573 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 IPFRLTRD 8 +PF LT D Sbjct: 176 MPFTLTND 183>XP_005274572 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 IPFRLTRD 8 +PF LT D Sbjct: 176 MPFTLTND 183>XP_005274571 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 IPFRLTRD 8 +PF LT D Sbjct: 176 MPFTLTND 183>XP_005253308 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PFRLTRDI 9 P RL RD+ Sbjct: 935 PLRLPRDL 942>XP_005248681 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PFRLTRD 8 P RLT+D Sbjct: 22 PMRLTQD 28>XP_005248680 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PFRLTRD 8 P RLT+D Sbjct: 23 PMRLTQD 29>XP_006714790 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PFRLTRD 8 P RLT+D Sbjct: 145 PMRLTQD 151>XP_005248678 Length = 884 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PFRLTRD 8 P RLT+D Sbjct: 123 PMRLTQD 129>XP_006714789 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PFRLTRD 8 P RLT+D Sbjct: 144 PMRLTQD 150>XP_006714788 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PFRLTRD 8 P RLT+D Sbjct: 145 PMRLTQD 151>NP_002018 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FRLTRD 8 F+LTRD Sbjct: 117 FKLTRD 122Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.163 0.505 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 460,527 Number of extensions: 667 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |