Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 19 665 NP_005913 19 665 XP_005267046 19 665 XP_005267045 19 665 NP_071332 17 4312 NP_001182036 16 7355 NP_112218 16 7355 NP_001182035 16 7355 NP_001017388 16 7355 NP_001182037 16 7355 NP_060736 16 7355 NP_001275677 16 7355 NP_079514 16 7355 NP_001011885 16 7355 NP_060267 16 7355 NP_878907 16 7355 NP_055646 16 7355 XP_005259650 16 7355 XP_006720636 16 7355 XP_005273981 16 7355 XP_006714095 16 7355 XP_006714094 16 7355 XP_005247635 16 7355 XP_005247634 16 7355 XP_006713750 16 7355 XP_006713495 16 7355 NP_001259017 15 9605 NP_001261 15 9605 NP_001259016 15 9605 NP_057664 15 9605 NP_001262 15 9605 NP_005062 15 9605 XP_005276813 15 9605 XP_006722907 15 9605 XP_006722906 15 9605 XP_006722905 15 9605 XP_005271924 15 9605 XP_005271923 15 9605 XP_005248455 15 9605 NP_001790 15 9605>NP_006715 Length = 1558 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 INAYLLLTK 9 I+AYLLLTK Sbjct: 897 IDAYLLLTK 905>NP_005913 Length = 1608 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 INAYLLLTK 9 I+AYLLLTK Sbjct: 897 IDAYLLLTK 905>XP_005267046 Length = 1554 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 INAYLLLTK 9 I+AYLLLTK Sbjct: 897 IDAYLLLTK 905>XP_005267045 Length = 1604 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 INAYLLLTK 9 I+AYLLLTK Sbjct: 897 IDAYLLLTK 905>NP_071332 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 INAYLLLTK 9 +N YLL+T+ Sbjct: 136 LNRYLLITR 144>NP_001182036 Length = 811 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLLLTK 9 YLLLTK Sbjct: 320 YLLLTK 325>NP_112218 Length = 811 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLLLTK 9 YLLLTK Sbjct: 320 YLLLTK 325>NP_001182035 Length = 811 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLLLTK 9 YLLLTK Sbjct: 320 YLLLTK 325>NP_001017388 Length = 811 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLLLTK 9 YLLLTK Sbjct: 320 YLLLTK 325>NP_001182037 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLLLTK 9 YLLLTK Sbjct: 306 YLLLTK 311>NP_060736 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INAYLLLT 8 INA+++LT Sbjct: 327 INAFVMLT 334>NP_001275677 Length = 604 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NAYLLL 7 NAYLLL Sbjct: 329 NAYLLL 334>NP_079514 Length = 482 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NAYLLLTK 9 NA++LLT+ Sbjct: 179 NAFMLLTQ 186>NP_001011885 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NAYLLLTK 9 NA++LLT+ Sbjct: 179 NAFMLLTQ 186>NP_060267 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NAYLLLTK 9 NA++LLT+ Sbjct: 221 NAFMLLTQ 228>NP_878907 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NAYLLL 7 NAYLLL Sbjct: 329 NAYLLL 334>NP_055646 Length = 2925 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AYLLLTK 9 A+LLLTK Sbjct: 480 AFLLLTK 486>XP_005259650 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NAYLLLTK 9 NA++LLT+ Sbjct: 73 NAFMLLTQ 80>XP_006720636 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NAYLLLTK 9 NA++LLT+ Sbjct: 179 NAFMLLTQ 186>XP_005273981 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NAYLLL 7 NAYLLL Sbjct: 329 NAYLLL 334>XP_006714095 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLLLTK 9 YLLLTK Sbjct: 306 YLLLTK 311>XP_006714094 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLLLTK 9 YLLLTK Sbjct: 306 YLLLTK 311>XP_005247635 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INAYLLLT 8 INA+++LT Sbjct: 327 INAFVMLT 334>XP_005247634 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INAYLLLT 8 INA+++LT Sbjct: 327 INAFVMLT 334>XP_006713750 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INAYLLLT 8 INA+++LT Sbjct: 327 INAFVMLT 334>XP_006713495 Length = 2969 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AYLLLTK 9 A+LLLTK Sbjct: 524 AFLLLTK 530>NP_001259017 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAYLLLT 8 NA++LLT Sbjct: 56 NAFILLT 62>NP_001261 Length = 1710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INAYLLLTK 9 +N Y L+TK Sbjct: 907 VNIYRLVTK 915>NP_001259016 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAYLLLT 8 NA++LLT Sbjct: 56 NAFILLT 62>NP_057664 Length = 1184 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NAYLLLT 8 N Y+LLT Sbjct: 408 NTYMLLT 414>NP_001262 Length = 1828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INAYLLLTK 9 +N Y L+TK Sbjct: 910 VNIYRLVTK 918>NP_005062 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAYLLLT 8 NA++LLT Sbjct: 56 NAFILLT 62>XP_005276813 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 INAYLLLT 8 I AY+L+T Sbjct: 57 IKAYMLMT 64>XP_006722907 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAYLLLT 8 NA++LLT Sbjct: 56 NAFILLT 62>XP_006722906 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAYLLLT 8 NA++LLT Sbjct: 56 NAFILLT 62>XP_006722905 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NAYLLLT 8 NA++LLT Sbjct: 56 NAFILLT 62>XP_005271924 Length = 1710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INAYLLLTK 9 +N Y L+TK Sbjct: 907 VNIYRLVTK 915>XP_005271923 Length = 1798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INAYLLLTK 9 +N Y L+TK Sbjct: 907 VNIYRLVTK 915>XP_005248455 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 INAYLLLT 8 I AY+L+T Sbjct: 57 IKAYMLMT 64>NP_001790 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 INAYLLLT 8 I AY+L+T Sbjct: 114 IKAYMLMT 121Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.143 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 403,708 Number of extensions: 498 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |