Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 18 1482 NP_001263689 18 1482 NP_001119584 18 1482 NP_001119586 18 1482 NP_001263625 18 1482 NP_001119590 18 1482 NP_001263690 18 1482 NP_001119585 18 1482 NP_001263624 18 1482 NP_001119588 18 1482 NP_001119587 18 1482 NP_001119589 18 1482 NP_001263627 18 1482 NP_001263628 18 1482 NP_001263626 18 1482 NP_001239553 16 7355 NP_005206 16 7355 NP_001106272 16 7355 NP_001106271 16 7355 NP_066920 16 7355 XP_005258261 16 7355 XP_006712148 16 7355 XP_006712147 16 7355 XP_006712146 16 7355 XP_006712145 16 7355 XP_006712144 16 7355 XP_006712143 16 7355 XP_005264569 16 7355 NP_001158159 15 9605 NP_062873 15 9605 NP_001158157 15 9605 NP_062874 15 9605 NP_001277024 15 9605 XP_006725081 15 9605 XP_006725080 15 9605 XP_006715539 15 9605 XP_005267031 15 9605 NP_001010923 15 9605 NP_000863 15 9605>NP_000537 Length = 393 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 251 ILTIITLED 259>NP_001263689 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 212 ILTIITLED 220>NP_001119584 Length = 393 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 251 ILTIITLED 259>NP_001119586 Length = 341 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 251 ILTIITLED 259>NP_001263625 Length = 302 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 212 ILTIITLED 220>NP_001119590 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 212 ILTIITLED 220>NP_001263690 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 212 ILTIITLED 220>NP_001119585 Length = 346 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 251 ILTIITLED 259>NP_001263624 Length = 307 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 212 ILTIITLED 220>NP_001119588 Length = 209 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 119 ILTIITLED 127>NP_001119587 Length = 261 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 119 ILTIITLED 127>NP_001119589 Length = 214 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 119 ILTIITLED 127>NP_001263627 Length = 182 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 92 ILTIITLED 100>NP_001263628 Length = 187 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 92 ILTIITLED 100>NP_001263626 Length = 234 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILTIITLAD 9 ILTIITL D Sbjct: 92 ILTIITLED 100>NP_001239553 Length = 965 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLAD 9 T+IT+AD Sbjct: 666 TVITIAD 672>NP_005206 Length = 1447 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LTIITLAD 9 +T++TL+D Sbjct: 613 ITVVTLSD 620>NP_001106272 Length = 960 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLAD 9 T+IT+AD Sbjct: 661 TVITIAD 667>NP_001106271 Length = 968 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLAD 9 T+IT+AD Sbjct: 669 TVITIAD 675>NP_066920 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLAD 9 T+IT+AD Sbjct: 674 TVITIAD 680>XP_005258261 Length = 1447 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LTIITLAD 9 +T++TL+D Sbjct: 613 ITVVTLSD 620>XP_006712148 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLAD 9 T+IT+AD Sbjct: 674 TVITIAD 680>XP_006712147 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLAD 9 T+IT+AD Sbjct: 674 TVITIAD 680>XP_006712146 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLAD 9 T+IT+AD Sbjct: 674 TVITIAD 680>XP_006712145 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLAD 9 T+IT+AD Sbjct: 674 TVITIAD 680>XP_006712144 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLAD 9 T+IT+AD Sbjct: 674 TVITIAD 680>XP_006712143 Length = 996 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLAD 9 T+IT+AD Sbjct: 697 TVITIAD 703>XP_005264569 Length = 1003 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIITLAD 9 T+IT+AD Sbjct: 704 TVITIAD 710>NP_001158159 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTIITLAD 9 LT++TLA+ Sbjct: 533 LTLLTLAE 540>NP_062873 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILTIITL 7 ILT+ITL Sbjct: 87 ILTLITL 93>NP_001158157 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTIITLAD 9 LT++TLA+ Sbjct: 568 LTLLTLAE 575>NP_062874 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILTIITL 7 ILT+ITL Sbjct: 87 ILTLITL 93>NP_001277024 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ILTIITLA 8 +LT++TLA Sbjct: 99 LLTMVTLA 106>XP_006725081 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTIITLAD 9 LT++TLA+ Sbjct: 471 LTLLTLAE 478>XP_006725080 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTIITLAD 9 LT++TLA+ Sbjct: 533 LTLLTLAE 540>XP_006715539 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTIITLAD 9 LT++TLA+ Sbjct: 471 LTLLTLAE 478>XP_005267031 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTIITLAD 9 LT++TLA+ Sbjct: 533 LTLLTLAE 540>NP_001010923 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LTIITLAD 9 LT++TLA+ Sbjct: 568 LTLLTLAE 575>NP_000863 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILTIITL 7 ILT+ITL Sbjct: 87 ILTLITL 93Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.151 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 344,817 Number of extensions: 514 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |