Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 19 665 NP_055524 17 2528 NP_005893 17 3301 NP_005891 17 3301 NP_001003688 17 3301 NP_001003652 17 3301 NP_001138576 17 3301 NP_001129409 17 3301 NP_001138574 17 3301 NP_005892 17 3301 NP_001138575 17 3301 NP_001001419 17 3301 NP_005894 17 3301 NP_001001420 17 3301 NP_536722 17 3301 NP_005896 17 3301 NP_001120689 17 3301 XP_005266835 17 3301 XP_006722514 17 3301 XP_005258316 17 3301 XP_006720569 17 3301 XP_005263050 17 3301 XP_005263049 17 3301 XP_005263048 17 3301 XP_006714280 17 3301 NP_001025034 17 3301 NP_065820 17 4312 NP_001238965 16 7355 NP_001238966 16 7355 NP_002859 16 7355 NP_004574 16 7355 NP_958842 16 7355 NP_001238968 16 7355 XP_005269108 16 7355 XP_005269109 16 7355 XP_006719603 16 7355 NP_660156 16 7355 NP_060064 16 7355 NP_004153 16 7355 NP_055223 15 9605 NP_005662 15 9605 NP_001269128 15 9605 NP_001269118 15 9605 NP_004715 15 9605 NP_001257826 15 9605 NP_001257825 15 9605 NP_001257823 15 9605 NP_001257824 15 9605 NP_065073 15 9605 XP_005274723 15 9605 XP_006719006 15 9605 XP_006715582 15 9605 NP_001005487 15 9605>NP_005350 Length = 552 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILRMRFVKG 9 ILRM FVKG Sbjct: 500 ILRMSFVKG 508>NP_055524 Length = 3546 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRMRFVKG 9 +RMRF++G Sbjct: 899 IRMRFIEG 906>NP_005893 Length = 425 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 372 IRMSFVKG 379>NP_005891 Length = 465 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 412 IRMSFVKG 419>NP_001003688 Length = 465 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 412 IRMSFVKG 419>NP_001003652 Length = 467 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 414 IRMSFVKG 421>NP_001138576 Length = 230 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 177 IRMSFVKG 184>NP_001129409 Length = 437 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 384 IRMSFVKG 391>NP_001138574 Length = 320 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 267 IRMSFVKG 274>NP_005892 Length = 467 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 414 IRMSFVKG 421>NP_001138575 Length = 381 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 328 IRMSFVKG 335>NP_001001419 Length = 465 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 412 IRMSFVKG 419>NP_005894 Length = 465 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 412 IRMSFVKG 419>NP_001001420 Length = 465 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 412 IRMSFVKG 419>NP_536722 Length = 405 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILRMRFVKG 9 IL MR+ KG Sbjct: 242 ILEMRYTKG 250>NP_005896 Length = 430 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 377 IRMSFVKG 384>NP_001120689 Length = 467 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 414 IRMSFVKG 421>XP_005266835 Length = 425 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ILRMRFVKG 9 IL MR+ KG Sbjct: 262 ILEMRYTKG 270>XP_006722514 Length = 467 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 414 IRMSFVKG 421>XP_005258316 Length = 467 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 414 IRMSFVKG 421>XP_006720569 Length = 373 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 320 IRMSFVKG 327>XP_005263050 Length = 426 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 373 IRMSFVKG 380>XP_005263049 Length = 465 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 412 IRMSFVKG 419>XP_005263048 Length = 465 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 412 IRMSFVKG 419>XP_006714280 Length = 465 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 +RM FVKG Sbjct: 412 IRMSFVKG 419>NP_001025034 Length = 191 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILRMRFVKG 9 +LRMR +KG Sbjct: 66 VLRMRSLKG 74>NP_065820 Length = 1388 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILRMRFVKG 9 ILR RF++G Sbjct: 1269 ILRTRFLEG 1277>NP_001238965 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 L +RFVKG Sbjct: 36 LVLRFVKG 43>NP_001238966 Length = 174 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 L +RFVKG Sbjct: 36 LVLRFVKG 43>NP_002859 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 L +RFVKG Sbjct: 36 LVLRFVKG 43>NP_004574 Length = 216 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 L +RFVKG Sbjct: 37 LVLRFVKG 44>NP_958842 Length = 216 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 L +RFVKG Sbjct: 37 LVLRFVKG 44>NP_001238968 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 L +RFVKG Sbjct: 70 LVLRFVKG 77>XP_005269108 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 L +RFVKG Sbjct: 36 LVLRFVKG 43>XP_005269109 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 L +RFVKG Sbjct: 36 LVLRFVKG 43>XP_006719603 Length = 250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 L +RFVKG Sbjct: 71 LVLRFVKG 78>NP_660156 Length = 198 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 L +RFVKG Sbjct: 23 LVLRFVKG 30>NP_060064 Length = 199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 L +RFVKG Sbjct: 23 LVLRFVKG 30>NP_004153 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRMRFVKG 9 L +RFVKG Sbjct: 36 LVLRFVKG 43>NP_055223 Length = 180 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LRMRFVK 8 +RMRF++ Sbjct: 163 IRMRFIR 169>NP_005662 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILRMRFVK 8 +LR RF+K Sbjct: 203 VLRRRFLK 210>NP_001269128 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILRMRFVK 8 +LR RF+K Sbjct: 162 VLRRRFLK 169>NP_001269118 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILRMRFVK 8 +LR RF+K Sbjct: 166 VLRRRFLK 173>NP_004715 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MRFVKG 9 MRF+KG Sbjct: 378 MRFLKG 383>NP_001257826 Length = 114 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LRMRFVK 8 +RMRF++ Sbjct: 97 IRMRFIR 103>NP_001257825 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LRMRFVK 8 +RMRF++ Sbjct: 117 IRMRFIR 123>NP_001257823 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LRMRFVK 8 +RMRF++ Sbjct: 171 IRMRFIR 177>NP_001257824 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LRMRFVK 8 +RMRF++ Sbjct: 117 IRMRFIR 123>NP_065073 Length = 2177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MRFVKG 9 M+FVKG Sbjct: 1359 MKFVKG 1364>XP_005274723 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ILRMRFVKG 9 I+R+R KG Sbjct: 16 IIRIRMAKG 24>XP_006719006 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MRFVKG 9 MRF+KG Sbjct: 314 MRFLKG 319>XP_006715582 Length = 2106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MRFVKG 9 M+FVKG Sbjct: 1288 MKFVKG 1293>NP_001005487 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILRMRFVKG 9 ILR+R V+G Sbjct: 222 ILRIRTVEG 230Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.352 0.164 0.472 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 370,582 Number of extensions: 625 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |