Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 19 869 XP_006718908 19 869 XP_005271621 19 869 XP_006718907 19 869 XP_006718906 19 869 XP_005271619 19 869 XP_005271618 19 869 NP_001095896 17 3301 NP_055661 17 3301 XP_005251177 17 3301 XP_005263921 17 3301 XP_005263920 17 3301 XP_005263919 17 3301 NP_000250 16 5631 NP_001135967 16 5631 XP_005254459 16 5631 XP_005254458 16 5631 XP_005254457 16 5631 XP_005254456 16 5631 XP_005254455 16 5631 XP_005254454 16 5631 NP_006531 16 7355 NP_006013 16 7355 NP_904358 16 7355 NP_001230726 16 7355 NP_001230727 16 7355 NP_775922 16 7355 XP_006719950 16 7355 XP_005251190 16 7355 XP_005251188 16 7355 XP_005251189 16 7355 XP_005251187 16 7355 XP_005251186 16 7355 XP_005251185 16 7355 XP_005247977 16 7355 NP_055594 16 7355 NP_001137359 15 9605 NP_001127810 15 9605 NP_009150 15 9605 NP_004279 15 9605 NP_004227 15 9605 NP_064632 15 9605 XP_006723600 15 9605 XP_006723599 15 9605 XP_005273260 15 9605 XP_005273259 15 9605 XP_005273258 15 9605 NP_001127809 15 9605 NP_060689 15 9605>NP_000042 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ILKQMIK+L Sbjct: 2311 ILKQMIKKL 2319>XP_006718908 Length = 1708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ILKQMIK+L Sbjct: 963 ILKQMIKKL 971>XP_005271621 Length = 2708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ILKQMIK+L Sbjct: 1963 ILKQMIKKL 1971>XP_006718907 Length = 3050 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ILKQMIK+L Sbjct: 2305 ILKQMIKKL 2313>XP_006718906 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ILKQMIK+L Sbjct: 2311 ILKQMIKKL 2319>XP_005271619 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ILKQMIK+L Sbjct: 2311 ILKQMIKKL 2319>XP_005271618 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ILKQMIK+L Sbjct: 2311 ILKQMIKKL 2319>NP_001095896 Length = 1140 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKQMIKQL 9 LKQMIK L Sbjct: 967 LKQMIKDL 974>NP_055661 Length = 1159 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+M KQ+ Sbjct: 423 ILKEMFKQM 431>XP_005251177 Length = 1011 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+M KQ+ Sbjct: 275 ILKEMFKQM 283>XP_005263921 Length = 1147 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKQMIKQL 9 LKQMIK L Sbjct: 974 LKQMIKDL 981>XP_005263920 Length = 1155 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKQMIKQL 9 LKQMIK L Sbjct: 982 LKQMIKDL 989>XP_005263919 Length = 1162 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKQMIKQL 9 LKQMIK L Sbjct: 989 LKQMIKDL 996>NP_000250 Length = 1855 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ++KQ++KQ+ Sbjct: 1684 LIKQVVKQM 1692>NP_001135967 Length = 1828 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ++KQ++KQ+ Sbjct: 1657 LIKQVVKQM 1665>XP_005254459 Length = 1825 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ++KQ++KQ+ Sbjct: 1654 LIKQVVKQM 1662>XP_005254458 Length = 1852 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ++KQ++KQ+ Sbjct: 1681 LIKQVVKQM 1689>XP_005254457 Length = 1853 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ++KQ++KQ+ Sbjct: 1682 LIKQVVKQM 1690>XP_005254456 Length = 1877 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ++KQ++KQ+ Sbjct: 1706 LIKQVVKQM 1714>XP_005254455 Length = 1880 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ++KQ++KQ+ Sbjct: 1709 LIKQVVKQM 1717>XP_005254454 Length = 1880 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ILKQMIKQL 9 ++KQ++KQ+ Sbjct: 1709 LIKQVVKQM 1717>NP_006531 Length = 1464 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+ +KQ+ Sbjct: 72 ILKETVKQI 80>NP_006013 Length = 144 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 +LK+ IK+L Sbjct: 76 VLKEQIKEL 84>NP_904358 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 +LK+ IK+L Sbjct: 1005 VLKEQIKEL 1013>NP_001230726 Length = 86 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 +LK+ IK+L Sbjct: 18 VLKEQIKEL 26>NP_001230727 Length = 86 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 +LK+ IK+L Sbjct: 18 VLKEQIKEL 26>NP_775922 Length = 6996 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+M+K + Sbjct: 1202 ILKEMLKDI 1210>XP_006719950 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 +LK+ IK+L Sbjct: 1005 VLKEQIKEL 1013>XP_005251190 Length = 1395 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+ +KQ+ Sbjct: 72 ILKETVKQI 80>XP_005251188 Length = 1464 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+ +KQ+ Sbjct: 72 ILKETVKQI 80>XP_005251189 Length = 1464 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+ +KQ+ Sbjct: 72 ILKETVKQI 80>XP_005251187 Length = 1464 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+ +KQ+ Sbjct: 72 ILKETVKQI 80>XP_005251186 Length = 1464 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+ +KQ+ Sbjct: 72 ILKETVKQI 80>XP_005251185 Length = 1464 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+ +KQ+ Sbjct: 72 ILKETVKQI 80>XP_005247977 Length = 756 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 +LK+ IK+L Sbjct: 687 VLKEQIKEL 695>NP_055594 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 +LK+ IK+L Sbjct: 711 VLKEQIKEL 719>NP_001137359 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKQMIK 7 LKQMIK Sbjct: 72 LKQMIK 77>NP_001127810 Length = 169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+ +K+L Sbjct: 85 ILKEKVKEL 93>NP_009150 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+ +K+L Sbjct: 64 ILKEKVKEL 72>NP_004279 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ILKQMIKQ 8 +LKQ +KQ Sbjct: 180 VLKQTLKQ 187>NP_004227 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKQMIK 7 LKQMIK Sbjct: 72 LKQMIK 77>NP_064632 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKQMIKQL 9 LKQM+K L Sbjct: 309 LKQMMKTL 316>XP_006723600 Length = 137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+ +K+L Sbjct: 85 ILKEKVKEL 93>XP_006723599 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+ +K+L Sbjct: 64 ILKEKVKEL 72>XP_005273260 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKQMIKQL 9 LKQM+K L Sbjct: 309 LKQMMKTL 316>XP_005273259 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKQMIKQL 9 LKQM+K L Sbjct: 309 LKQMMKTL 316>XP_005273258 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKQMIKQL 9 LKQM+K L Sbjct: 309 LKQMMKTL 316>NP_001127809 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ILKQMIKQL 9 ILK+ +K+L Sbjct: 64 ILKEKVKEL 72>NP_060689 Length = 849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LKQMIKQL 9 LKQ+IK++ Sbjct: 357 LKQLIKKM 364Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.147 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 360,090 Number of extensions: 969 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |