Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 18 1482 NP_001120972 18 1482 XP_006716052 18 1482 XP_006716051 18 1482 NP_115618 17 4312 XP_006713726 17 4312 NP_001265618 16 5631 XP_005264801 16 5631 XP_006713174 16 5631 XP_005264800 16 5631 NP_061891 16 7355 XP_006714032 16 7355 NP_054733 15 9605 NP_000247 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_001252542 15 9605 NP_596869 15 9605 NP_001010985 15 9605 XP_005260859 15 9605 XP_005260858 15 9605 XP_005260857 15 9605 XP_006723671 15 9605 XP_006723670 15 9605 XP_005260854 15 9605 XP_006723669 15 9605 XP_006718301 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 XP_006710676 15 9605 NP_071927 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_000236 Length = 1390 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILFRVFAQS 9 ILF VFAQS Sbjct: 341 ILFGVFAQS 349>NP_001120972 Length = 1408 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILFRVFAQS 9 ILF VFAQS Sbjct: 341 ILFGVFAQS 349>XP_006716052 Length = 1409 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILFRVFAQS 9 ILF VFAQS Sbjct: 360 ILFGVFAQS 368>XP_006716051 Length = 1427 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ILFRVFAQS 9 ILF VFAQS Sbjct: 360 ILFGVFAQS 368>NP_115618 Length = 1896 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ILFRVFAQ 8 +LF VFAQ Sbjct: 336 VLFTVFAQ 343>XP_006713726 Length = 1910 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ILFRVFAQ 8 +LF VFAQ Sbjct: 354 VLFTVFAQ 361>NP_001265618 Length = 527 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LFRVFAQ 8 LFR FAQ Sbjct: 341 LFRAFAQ 347>XP_005264801 Length = 527 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LFRVFAQ 8 LFR FAQ Sbjct: 341 LFRAFAQ 347>XP_006713174 Length = 527 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LFRVFAQ 8 LFR FAQ Sbjct: 341 LFRAFAQ 347>XP_005264800 Length = 527 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LFRVFAQ 8 LFR FAQ Sbjct: 341 LFRAFAQ 347>NP_061891 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 ILFRVFAQ 8 +LF++F+Q Sbjct: 144 VLFQIFSQ 151>XP_006714032 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ILFRVFA 7 ILF+VFA Sbjct: 412 ILFQVFA 418>NP_054733 Length = 2136 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFRVFAQS 9 LFRVF+ S Sbjct: 1014 LFRVFSLS 1021>NP_000247 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVF+Q+ Sbjct: 1137 FRVFSQN 1143>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 11278 FRVFAEN 11284Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 13361 FRVFAEN 13367Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 19948 FRVFAEN 19954Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 24006 FRVFAEN 24012>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 11403 FRVFAEN 11409Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 13486 FRVFAEN 13492Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 20073 FRVFAEN 20079Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 24131 FRVFAEN 24137>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 18702 FRVFAEN 18708Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 20785 FRVFAEN 20791Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 27372 FRVFAEN 27378Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 31430 FRVFAEN 31436>NP_001252542 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 194 FRVFAEN 200>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 17775 FRVFAEN 17781Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 19858 FRVFAEN 19864Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 26445 FRVFAEN 26451Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 30503 FRVFAEN 30509>NP_001010985 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 217 FRVFAEN 223>XP_005260859 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ILFRVFAQ 8 + FR FAQ Sbjct: 523 VCFRTFAQ 530>XP_005260858 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ILFRVFAQ 8 + FR FAQ Sbjct: 523 VCFRTFAQ 530>XP_005260857 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ILFRVFAQ 8 + FR FAQ Sbjct: 523 VCFRTFAQ 530>XP_006723671 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ILFRVFAQ 8 + FR FAQ Sbjct: 523 VCFRTFAQ 530>XP_006723670 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ILFRVFAQ 8 + FR FAQ Sbjct: 523 VCFRTFAQ 530>XP_005260854 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ILFRVFAQ 8 + FR FAQ Sbjct: 523 VCFRTFAQ 530>XP_006723669 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ILFRVFAQ 8 + FR FAQ Sbjct: 523 VCFRTFAQ 530>XP_006718301 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVF+Q+ Sbjct: 1131 FRVFSQN 1137>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 7015 FRVFAEN 7021Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 9098 FRVFAEN 9104Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 15685 FRVFAEN 15691Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 19743 FRVFAEN 19749>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 8374 FRVFAEN 8380Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 10457 FRVFAEN 10463Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 17044 FRVFAEN 17050Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 21102 FRVFAEN 21108>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 18330 FRVFAEN 18336Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 20413 FRVFAEN 20419Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 27000 FRVFAEN 27006Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 31058 FRVFAEN 31064>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 19836 FRVFAEN 19842Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 21919 FRVFAEN 21925Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 28506 FRVFAEN 28512Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 32564 FRVFAEN 32570>XP_006710676 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 217 FRVFAEN 223>NP_071927 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ILFRVFAQ 8 + FR FAQ Sbjct: 523 VCFRTFAQ 530>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 20343 FRVFAEN 20349Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 22426 FRVFAEN 22432Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 29013 FRVFAEN 29019Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 33071 FRVFAEN 33077>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 11470 FRVFAEN 11476Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 13553 FRVFAEN 13559Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 20140 FRVFAEN 20146Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRVFAQS 9 FRVFA++ Sbjct: 24198 FRVFAEN 24204Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.355 0.155 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 293,422 Number of extensions: 567 Number of successful extensions: 66 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |