Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001276866 18 1135 NP_004439 18 1135 NP_001276865 18 1135 NP_001005862 18 1135 XP_005257197 18 1135 XP_006721828 18 1135 XP_005245315 17 3301 XP_006711447 17 3301 XP_005245314 17 3301 NP_002637 17 3301 NP_055495 17 4312 XP_006722261 17 4312 XP_005258130 17 4312 NP_870987 16 5631 XP_006716781 16 5631 XP_005251409 16 5631 XP_005251408 16 5631 XP_006716780 16 5631 NP_001129241 16 7355 NP_001129240 16 7355 NP_006496 16 7355 NP_149121 16 7355 NP_001164632 16 7355 NP_001164630 16 7355 NP_001164629 16 7355 NP_001164628 16 7355 NP_001164627 16 7355 NP_064569 16 7355 XP_005259426 16 7355 XP_005259424 16 7355 XP_005259423 16 7355 XP_005263972 16 7355 XP_005263971 16 7355 NP_036442 15 9605 NP_060542 15 9605 NP_001138600 15 9605 NP_002351 15 9605 XP_006725534 15 9605 XP_006715836 15 9605 XP_005249908 15 9605 XP_006715439 15 9605 NP_001092763 15 9605 NP_443155 15 9605>NP_001276866 Length = 1055 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IKVSRENTS 9 IKV RENTS Sbjct: 752 IKVLRENTS 760>NP_004439 Length = 1255 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IKVSRENTS 9 IKV RENTS Sbjct: 752 IKVLRENTS 760>NP_001276865 Length = 1240 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IKVSRENTS 9 IKV RENTS Sbjct: 737 IKVLRENTS 745>NP_001005862 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IKVSRENTS 9 IKV RENTS Sbjct: 722 IKVLRENTS 730>XP_005257197 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IKVSRENTS 9 IKV RENTS Sbjct: 722 IKVLRENTS 730>XP_006721828 Length = 1336 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IKVSRENTS 9 IKV RENTS Sbjct: 833 IKVLRENTS 841>XP_005245315 Length = 1607 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 +KV RENT Sbjct: 1362 VKVMRENT 1369>XP_006711447 Length = 1634 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 +KV RENT Sbjct: 1389 VKVMRENT 1396>XP_005245314 Length = 1634 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 +KV RENT Sbjct: 1389 VKVMRENT 1396>NP_002637 Length = 1634 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 +KV RENT Sbjct: 1389 VKVMRENT 1396>NP_055495 Length = 2235 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IKVSRENTS 9 +KV ENTS Sbjct: 279 VKVKMENTS 287>XP_006722261 Length = 2092 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IKVSRENTS 9 +KV ENTS Sbjct: 136 VKVKMENTS 144>XP_005258130 Length = 2234 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IKVSRENTS 9 +KV ENTS Sbjct: 279 VKVKMENTS 287>NP_870987 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVSRENT 8 K+S+ENT Sbjct: 454 KISKENT 460>XP_006716781 Length = 387 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVSRENT 8 K+S+ENT Sbjct: 280 KISKENT 286>XP_005251409 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVSRENT 8 K+S+ENT Sbjct: 454 KISKENT 460>XP_005251408 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVSRENT 8 K+S+ENT Sbjct: 454 KISKENT 460>XP_006716780 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVSRENT 8 K+S+ENT Sbjct: 454 KISKENT 460>NP_001129241 Length = 364 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSRENTS 9 VSREN+S Sbjct: 348 VSRENSS 354>NP_001129240 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSRENTS 9 VSREN+S Sbjct: 356 VSRENSS 362>NP_006496 Length = 417 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSRENTS 9 VSREN+S Sbjct: 401 VSRENSS 407>NP_149121 Length = 697 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 I +SR+NT Sbjct: 243 ISISRDNT 250>NP_001164632 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 I +SR+NT Sbjct: 185 ISISRDNT 192>NP_001164630 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 I +SR+NT Sbjct: 185 ISISRDNT 192>NP_001164629 Length = 554 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 I +SR+NT Sbjct: 195 ISISRDNT 202>NP_001164628 Length = 602 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 I +SR+NT Sbjct: 243 ISISRDNT 250>NP_001164627 Length = 639 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 I +SR+NT Sbjct: 185 ISISRDNT 192>NP_064569 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IKVSRENTS 9 + VSR NTS Sbjct: 121 VNVSRGNTS 129>XP_005259426 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 I +SR+NT Sbjct: 243 ISISRDNT 250>XP_005259424 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 I +SR+NT Sbjct: 185 ISISRDNT 192>XP_005259423 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 I +SR+NT Sbjct: 243 ISISRDNT 250>XP_005263972 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IKVSRENTS 9 + VSR NTS Sbjct: 121 VNVSRGNTS 129>XP_005263971 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IKVSRENTS 9 + VSR NTS Sbjct: 121 VNVSRGNTS 129>NP_036442 Length = 1232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IKVSREN 7 +KVSR+N Sbjct: 1076 VKVSRKN 1082>NP_060542 Length = 2144 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IKVSRENT 8 +KV+ ENT Sbjct: 270 VKVTMENT 277>NP_001138600 Length = 1911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 IKVSRENT 8 +KV ENT Sbjct: 1065 VKVEEENT 1072>NP_002351 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KVSRENTS 9 K++REN+S Sbjct: 92 KLARENSS 99>XP_006725534 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKVSRENTS 9 +K+S ENT+ Sbjct: 1085 LKISFENTA 1093>XP_006715836 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KVSRENTS 9 K++REN+S Sbjct: 92 KLARENSS 99>XP_005249908 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KVSRENTS 9 K++REN+S Sbjct: 215 KLARENSS 222>XP_006715439 Length = 1911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 IKVSRENT 8 +KV ENT Sbjct: 1065 VKVEEENT 1072>NP_001092763 Length = 1234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IKVSREN 7 +KVSR+N Sbjct: 1078 VKVSRKN 1084>NP_443155 Length = 1325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IKVSRENTS 9 +K+S ENT+ Sbjct: 1236 LKISFENTA 1244Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.110 0.249 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 429,920 Number of extensions: 553 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |