Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_057502 22 134 NP_861969 22 134 NP_000259 22 134 NP_861968 22 134 NP_861966 22 134 NP_861970 22 134 NP_861546 22 134 NP_861967 22 134 NP_078903 17 3301 NP_588613 17 4312 NP_001008738 17 4312 XP_006717717 17 4312 XP_006717716 17 4312 XP_006717715 17 4312 XP_006717714 17 4312 XP_006717713 17 4312 XP_006717712 17 4312 XP_006717711 17 4312 XP_006717710 17 4312 XP_006717709 17 4312 XP_006717708 17 4312 NP_055448 17 4312 NP_003611 16 5631 NP_001011705 16 5631 NP_008946 16 5631 NP_624358 16 5631 NP_057404 16 5631 XP_006718305 16 5631 XP_006718304 16 5631 XP_006718303 16 5631 XP_005253007 16 5631 NP_005768 16 7355 NP_079130 16 7355 NP_783297 15 9605 NP_115859 15 9605 NP_003248 15 9605 NP_061978 15 9605 NP_659489 15 9605 NP_002006 15 9605 NP_000203 15 9605 NP_001193973 15 9605 NP_002204 15 9605 NP_001029082 15 9605 NP_060787 15 9605 NP_060733 15 9605 XP_006725623 15 9605 XP_006725622 15 9605 XP_006725621 15 9605 XP_006725620 15 9605 XP_006725619 15 9605 XP_006725618 15 9605 XP_006725617 15 9605 XP_006725616 15 9605 XP_005254678 15 9605 XP_006720724 15 9605 XP_005254677 15 9605 XP_005254676 15 9605 XP_005254675 15 9605 XP_006720723 15 9605 XP_005254674 15 9605 XP_005254673 15 9605 XP_005248229 15 9605 XP_006714030 15 9605 XP_005247493 15 9605 XP_006713118 15 9605 XP_006712103 15 9605 XP_006712102 15 9605 XP_006711587 15 9605 XP_005273306 15 9605 NP_665702 15 9605 NP_004610 15 9605>NP_057502 Length = 590 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGDSMSFDF 9 IGDS+SFDF Sbjct: 501 IGDSLSFDF 509>NP_861969 Length = 507 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGDSMSFDF 9 IGDS+SFDF Sbjct: 418 IGDSLSFDF 426>NP_000259 Length = 595 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGDSMSFDF 9 IGDS+SFDF Sbjct: 501 IGDSLSFDF 509>NP_861968 Length = 507 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGDSMSFDF 9 IGDS+SFDF Sbjct: 418 IGDSLSFDF 426>NP_861966 Length = 548 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGDSMSFDF 9 IGDS+SFDF Sbjct: 459 IGDSLSFDF 467>NP_861970 Length = 590 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGDSMSFDF 9 IGDS+SFDF Sbjct: 501 IGDSLSFDF 509>NP_861546 Length = 590 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGDSMSFDF 9 IGDS+SFDF Sbjct: 501 IGDSLSFDF 509>NP_861967 Length = 549 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IGDSMSFDF 9 IGDS+SFDF Sbjct: 460 IGDSLSFDF 468>NP_078903 Length = 364 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IGDSMSFDF 9 +GD MSF F Sbjct: 121 LGDYMSFHF 129>NP_588613 Length = 1166 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 IGDSMSFD 8 IGDSMS D Sbjct: 755 IGDSMSPD 762>NP_001008738 Length = 1138 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 IGDSMSFD 8 IGDSMS D Sbjct: 727 IGDSMSPD 734>XP_006717717 Length = 859 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717716 Length = 1619 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717715 Length = 1660 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717714 Length = 1665 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717713 Length = 1666 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717712 Length = 1670 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717711 Length = 1677 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717710 Length = 1706 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717709 Length = 1712 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDSMSF Sbjct: 203 GDSMSF 208>XP_006717708 Length = 1717 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDSMSF Sbjct: 203 GDSMSF 208>NP_055448 Length = 1173 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 IGDSMSFD 8 +GD M FD Sbjct: 799 VGDKMRFD 806>NP_003611 Length = 605 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IGDSMSFDF 9 +GD S+DF Sbjct: 275 LGDLWSYDF 283>NP_001011705 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDSMSFD 8 G+SM+FD Sbjct: 266 GESMTFD 272>NP_008946 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDSMSFD 8 G+SM+FD Sbjct: 267 GESMTFD 273>NP_624358 Length = 1726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IGDSMSFDF 9 I DSM F F Sbjct: 1154 IADSMEFGF 1162>NP_057404 Length = 1800 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IGDSMSFDF 9 I DSM F F Sbjct: 1154 IADSMEFGF 1162>XP_006718305 Length = 1743 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IGDSMSFDF 9 I DSM F F Sbjct: 1171 IADSMEFGF 1179>XP_006718304 Length = 1753 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IGDSMSFDF 9 I DSM F F Sbjct: 1107 IADSMEFGF 1115>XP_006718303 Length = 1792 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IGDSMSFDF 9 I DSM F F Sbjct: 1146 IADSMEFGF 1154>XP_005253007 Length = 1817 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IGDSMSFDF 9 I DSM F F Sbjct: 1171 IADSMEFGF 1179>NP_005768 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DSMSFDF 9 DS+ FDF Sbjct: 51 DSLPFDF 57>NP_079130 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GDSMSFDF 9 GDS+ DF Sbjct: 396 GDSIDMDF 403>NP_783297 Length = 1668 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1378 GNSVSLDF 1385>NP_115859 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDSMS+ Sbjct: 586 GDSMSY 591>NP_003248 Length = 1748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1458 GNSVSLDF 1465>NP_061978 Length = 4242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDSMS+ Sbjct: 4155 GDSMSY 4160>NP_659489 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GDSMSFD 8 GDS S+D Sbjct: 83 GDSSSYD 89>NP_002006 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 GD++ F+F Sbjct: 625 GDTLDFNF 632>NP_000203 Length = 788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IGDSMSF 7 IGD++SF Sbjct: 417 IGDTVSF 423>NP_001193973 Length = 1294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 IGDSMSFD 8 +GD SFD Sbjct: 3 MGDDKSFD 10>NP_002204 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IGDSMSFD 8 IGD+ SF+ Sbjct: 418 IGDTASFE 425>NP_001029082 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 20 GNSISLDF 27>NP_060787 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDS+SF Sbjct: 173 GDSLSF 178>NP_060733 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IGDSMSF 7 +GD MSF Sbjct: 1354 VGDVMSF 1360>XP_006725623 Length = 1766 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1456 GNSVSLDF 1463>XP_006725622 Length = 1692 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1382 GNSVSLDF 1389>XP_006725621 Length = 1735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1445 GNSVSLDF 1452>XP_006725620 Length = 1755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1445 GNSVSLDF 1452>XP_006725619 Length = 1768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1458 GNSVSLDF 1465>XP_006725618 Length = 1772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1462 GNSVSLDF 1469>XP_006725617 Length = 1815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1525 GNSVSLDF 1532>XP_006725616 Length = 1835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1525 GNSVSLDF 1532>XP_005254678 Length = 1766 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1456 GNSVSLDF 1463>XP_006720724 Length = 1692 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1382 GNSVSLDF 1389>XP_005254677 Length = 1735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1445 GNSVSLDF 1452>XP_005254676 Length = 1755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1445 GNSVSLDF 1452>XP_005254675 Length = 1768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1458 GNSVSLDF 1465>XP_006720723 Length = 1772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1462 GNSVSLDF 1469>XP_005254674 Length = 1815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1525 GNSVSLDF 1532>XP_005254673 Length = 1835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 1525 GNSVSLDF 1532>XP_005248229 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDS+SF Sbjct: 108 GDSLSF 113>XP_006714030 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GDSMSF 7 GDS+SF Sbjct: 142 GDSLSF 147>XP_005247493 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IGDSMSFD 8 IGD+ SF+ Sbjct: 388 IGDTASFE 395>XP_006713118 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 IGDSMSFD 8 +GD SFD Sbjct: 3 MGDDKSFD 10>XP_006712103 Length = 1175 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IGDSMSF 7 +GD MSF Sbjct: 1094 VGDVMSF 1100>XP_006712102 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IGDSMSF 7 +GD MSF Sbjct: 1232 VGDVMSF 1238>XP_006711587 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 84 GNSISLDF 91>XP_005273306 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 84 GNSISLDF 91>NP_665702 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 20 GNSISLDF 27>NP_004610 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDSMSFDF 9 G+S+S DF Sbjct: 20 GNSISLDF 27Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.147 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 476,374 Number of extensions: 905 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |