Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 18 1935 NP_005913 18 1935 XP_006722539 18 1935 XP_005267046 18 1935 XP_005267045 18 1935 NP_001129652 18 1935 NP_115711 17 2528 NP_115834 17 2528 NP_001015877 17 2528 XP_006710739 17 2528 XP_005270979 17 2528 NP_056972 17 2528 NP_065928 17 3301 XP_005256527 17 3301 NP_065863 17 4312 XP_005260057 17 4312 XP_006722867 17 4312 XP_006722866 17 4312 XP_006722865 17 4312 XP_005260058 17 4312 NP_001257545 16 5631 NP_002754 16 5631 XP_006711518 16 5631 XP_005273252 16 5631 XP_005273253 16 5631 XP_005273251 16 5631 NP_055730 16 7355 NP_001242982 16 7355 NP_065094 16 7355 NP_037444 16 7355 NP_001093646 16 7355 XP_005259935 16 7355 XP_005259934 16 7355 XP_005259933 16 7355 XP_005259931 16 7355 XP_005259930 16 7355 XP_006717494 16 7355 XP_006717493 16 7355 XP_006717492 16 7355 XP_006717491 16 7355 XP_006717490 16 7355 XP_006717489 16 7355 XP_006717488 16 7355 XP_006717487 16 7355 XP_006717486 16 7355 NP_055084 15 9605 NP_001265055 15 9605 NP_001265056 15 9605 NP_001124177 15 9605 NP_001124175 15 9605 NP_001124176 15 9605 NP_000427 15 9605 NP_066977 15 9605 NP_478059 15 9605 NP_001265054 15 9605 NP_056265 15 9605 NP_056173 15 9605 NP_001036059 15 9605 NP_005344 15 9605 NP_060009 15 9605 XP_006724049 15 9605 XP_006724048 15 9605 XP_006721125 15 9605 XP_006715980 15 9605 XP_005262762 15 9605 XP_005262761 15 9605 NP_004578 15 9605 NP_001036041 15 9605 NP_005889 15 9605 NP_976240 15 9605>NP_006715 Length = 1558 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IEDIQKSVR 9 IE IQKSVR Sbjct: 1244 IEAIQKSVR 1252>NP_005913 Length = 1608 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IEDIQKSVR 9 IE IQKSVR Sbjct: 1294 IEAIQKSVR 1302>XP_006722539 Length = 75 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 IEDIQKSVR 9 IED+QK+V+ Sbjct: 47 IEDLQKNVK 55>XP_005267046 Length = 1554 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IEDIQKSVR 9 IE IQKSVR Sbjct: 1240 IEAIQKSVR 1248>XP_005267045 Length = 1604 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IEDIQKSVR 9 IE IQKSVR Sbjct: 1290 IEAIQKSVR 1298>NP_001129652 Length = 74 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 IEDIQKSVR 9 IED+QK+V+ Sbjct: 47 IEDLQKNVK 55>NP_115711 Length = 312 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IEDIQKSVR 9 IED+QK ++ Sbjct: 67 IEDVQKEIK 75>NP_115834 Length = 365 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IEDIQKSVR 9 IED+QK ++ Sbjct: 67 IEDVQKEIK 75>NP_001015877 Length = 365 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IEDIQKSVR 9 IED+QK ++ Sbjct: 67 IEDVQKEIK 75>XP_006710739 Length = 560 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 IEDIQKSVR 9 IED+QKS++ Sbjct: 524 IEDLQKSLQ 532>XP_005270979 Length = 728 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 IEDIQKSVR 9 IED+QKS++ Sbjct: 524 IEDLQKSLQ 532>NP_056972 Length = 728 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 IEDIQKSVR 9 IED+QKS++ Sbjct: 524 IEDLQKSLQ 532>NP_065928 Length = 4427 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IEDIQKSV 8 +EDIQKS+ Sbjct: 1513 LEDIQKSL 1520>XP_005256527 Length = 4427 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IEDIQKSV 8 +EDIQKS+ Sbjct: 1513 LEDIQKSL 1520>NP_065863 Length = 2047 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IEDIQKSVR 9 IED+QK R Sbjct: 1906 IEDMQKKTR 1914>XP_005260057 Length = 2113 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IEDIQKSVR 9 IED+QK R Sbjct: 1972 IEDMQKKTR 1980>XP_006722867 Length = 1159 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IEDIQKSVR 9 IED+QK R Sbjct: 1018 IEDMQKKTR 1026>XP_006722866 Length = 1778 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IEDIQKSVR 9 IED+QK R Sbjct: 1637 IEDMQKKTR 1645>XP_006722865 Length = 2078 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IEDIQKSVR 9 IED+QK R Sbjct: 1937 IEDMQKKTR 1945>XP_005260058 Length = 2082 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IEDIQKSVR 9 IED+QK R Sbjct: 1941 IEDMQKKTR 1949>NP_001257545 Length = 737 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IEDIQKSVR 9 +ED+QK +R Sbjct: 243 LEDMQKQLR 251>NP_002754 Length = 737 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IEDIQKSVR 9 +ED+QK +R Sbjct: 243 LEDMQKQLR 251>XP_006711518 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IEDIQKSVR 9 +ED+QK +R Sbjct: 243 LEDMQKQLR 251>XP_005273252 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IEDIQKSVR 9 +ED+QK +R Sbjct: 243 LEDMQKQLR 251>XP_005273253 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IEDIQKSVR 9 +ED+QK +R Sbjct: 243 LEDMQKQLR 251>XP_005273251 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IEDIQKSVR 9 +ED+QK +R Sbjct: 243 LEDMQKQLR 251>NP_055730 Length = 1710 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDIQKSVR 9 ED+QK+++ Sbjct: 954 EDLQKTIK 961>NP_001242982 Length = 1709 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDIQKSVR 9 ED+QK+++ Sbjct: 953 EDLQKTIK 960>NP_065094 Length = 437 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IEDIQKSV 8 IED+QK++ Sbjct: 109 IEDLQKTL 116>NP_037444 Length = 719 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IEDIQKSVR 9 +ED+QK+++ Sbjct: 517 VEDLQKALQ 525>NP_001093646 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IEDIQKSVR 9 +ED+QK+++ Sbjct: 517 VEDLQKALQ 525>XP_005259935 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IEDIQKSVR 9 +ED+QK+++ Sbjct: 444 VEDLQKALQ 452>XP_005259934 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IEDIQKSVR 9 +ED+QK+++ Sbjct: 444 VEDLQKALQ 452>XP_005259933 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IEDIQKSVR 9 +ED+QK+++ Sbjct: 444 VEDLQKALQ 452>XP_005259931 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IEDIQKSVR 9 +ED+QK+++ Sbjct: 517 VEDLQKALQ 525>XP_005259930 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IEDIQKSVR 9 +ED+QK+++ Sbjct: 517 VEDLQKALQ 525>XP_006717494 Length = 1571 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDIQKSVR 9 ED+QK+++ Sbjct: 815 EDLQKTIK 822>XP_006717493 Length = 1610 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDIQKSVR 9 ED+QK+++ Sbjct: 854 EDLQKTIK 861>XP_006717492 Length = 1635 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDIQKSVR 9 ED+QK+++ Sbjct: 1316 EDLQKTIK 1323>XP_006717491 Length = 1677 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDIQKSVR 9 ED+QK+++ Sbjct: 921 EDLQKTIK 928>XP_006717490 Length = 1791 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDIQKSVR 9 ED+QK+++ Sbjct: 1035 EDLQKTIK 1042>XP_006717489 Length = 1945 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDIQKSVR 9 ED+QK+++ Sbjct: 1316 EDLQKTIK 1323>XP_006717488 Length = 2031 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDIQKSVR 9 ED+QK+++ Sbjct: 1316 EDLQKTIK 1323>XP_006717487 Length = 2071 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDIQKSVR 9 ED+QK+++ Sbjct: 1315 EDLQKTIK 1322>XP_006717486 Length = 2072 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDIQKSVR 9 ED+QK+++ Sbjct: 1316 EDLQKTIK 1323>NP_055084 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IEDIQKSV 8 ++D++KSV Sbjct: 259 VDDVRKSV 266>NP_001265055 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IEDIQKSV 8 ++D++KSV Sbjct: 259 VDDVRKSV 266>NP_001265056 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IEDIQKSV 8 ++D++KSV Sbjct: 259 VDDVRKSV 266>NP_001124177 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IEDIQKSV 8 ++D++KSV Sbjct: 259 VDDVRKSV 266>NP_001124175 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IEDIQKSV 8 ++D++KSV Sbjct: 259 VDDVRKSV 266>NP_001124176 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IEDIQKSV 8 ++D++KSV Sbjct: 259 VDDVRKSV 266>NP_000427 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 IEDIQKS 7 ++D+QKS Sbjct: 495 VDDVQKS 501>NP_066977 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IEDIQK 6 IED+QK Sbjct: 305 IEDVQK 310>NP_478059 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IEDIQK 6 IED+QK Sbjct: 351 IEDVQK 356>NP_001265054 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IEDIQKSV 8 ++D++KSV Sbjct: 259 VDDVRKSV 266>NP_056265 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EDIQKSV 8 +D+QKSV Sbjct: 577 DDLQKSV 583>NP_056173 Length = 939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IEDIQK 6 +EDIQK Sbjct: 399 VEDIQK 404>NP_001036059 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EDIQKSV 8 +D+QKSV Sbjct: 446 DDLQKSV 452>NP_005344 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DIQKSVR 9 DIQ SVR Sbjct: 667 DIQSSVR 673>NP_060009 Length = 4116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IEDIQKSV 8 +EDIQK + Sbjct: 1153 LEDIQKGL 1160>XP_006724049 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IEDIQK 6 +EDIQK Sbjct: 438 VEDIQK 443>XP_006724048 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IEDIQK 6 +EDIQK Sbjct: 328 VEDIQK 333>XP_006721125 Length = 4070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IEDIQKSV 8 +EDIQK + Sbjct: 1107 LEDIQKGL 1114>XP_006715980 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EDIQKSV 8 +D+QKSV Sbjct: 577 DDLQKSV 583>XP_005262762 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IEDIQKSV 8 ++D++KSV Sbjct: 259 VDDVRKSV 266>XP_005262761 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IEDIQKSV 8 ++D++KSV Sbjct: 259 VDDVRKSV 266>NP_004578 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IEDIQKSV 8 + D+QKSV Sbjct: 709 LRDLQKSV 716>NP_001036041 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IEDIQKSV 8 + D+QKSV Sbjct: 709 LRDLQKSV 716>NP_005889 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDIQKSVR 9 +DIQK+++ Sbjct: 121 QDIQKTIK 128>NP_976240 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDIQKSVR 9 +DIQK+++ Sbjct: 121 QDIQKTIK 128Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.134 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 425,499 Number of extensions: 869 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |