Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1135 NP_001035957 18 1135 XP_006721990 18 1135 XP_006721989 18 1135 XP_005258041 18 1135 XP_006721988 18 1135 XP_006721987 18 1135 XP_006721986 18 1135 XP_005258040 18 1135 XP_006721985 18 1135 NP_002882 18 1482 NP_001139120 18 1482 XP_006720692 18 1482 XP_006720691 18 1482 XP_006720690 18 1482 XP_005254635 18 1482 NP_005224 17 4312 NP_004422 17 4312 XP_005264773 17 4312 XP_005264772 17 4312 XP_005245809 17 4312 XP_005245808 17 4312 NP_001182502 16 7355 NP_001258211 16 7355 NP_085124 16 7355 NP_803187 16 7355 NP_001262 16 7355 NP_775922 16 7355 NP_079421 15 9605 NP_001275558 15 9605 NP_001156 15 9605 NP_892007 15 9605 NP_775819 15 9605 NP_004431 15 9605 XP_005258685 15 9605 XP_005270233 15 9605 XP_005270231 15 9605 XP_005270230 15 9605 XP_005270229 15 9605 XP_005270228 15 9605 XP_006715432 15 9605 XP_005248726 15 9605>NP_000258 Length = 2818 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AILDKLIT 9 AILDKLIT Sbjct: 1952 AILDKLIT 1959>NP_001035957 Length = 2839 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AILDKLIT 9 AILDKLIT Sbjct: 1973 AILDKLIT 1980>XP_006721990 Length = 2823 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AILDKLIT 9 AILDKLIT Sbjct: 1983 AILDKLIT 1990>XP_006721989 Length = 2823 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AILDKLIT 9 AILDKLIT Sbjct: 1983 AILDKLIT 1990>XP_005258041 Length = 2836 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AILDKLIT 9 AILDKLIT Sbjct: 1952 AILDKLIT 1959>XP_006721988 Length = 2846 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AILDKLIT 9 AILDKLIT Sbjct: 1962 AILDKLIT 1969>XP_006721987 Length = 2849 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AILDKLIT 9 AILDKLIT Sbjct: 1983 AILDKLIT 1990>XP_006721986 Length = 2854 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AILDKLIT 9 AILDKLIT Sbjct: 1970 AILDKLIT 1977>XP_005258040 Length = 2857 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AILDKLIT 9 AILDKLIT Sbjct: 1973 AILDKLIT 1980>XP_006721985 Length = 2867 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AILDKLIT 9 AILDKLIT Sbjct: 1983 AILDKLIT 1990>NP_002882 Length = 1273 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IAILDKLIT 9 I +LDKLIT Sbjct: 685 IVVLDKLIT 693>NP_001139120 Length = 1257 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IAILDKLIT 9 I +LDKLIT Sbjct: 672 IVVLDKLIT 680>XP_006720692 Length = 1270 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IAILDKLIT 9 I +LDKLIT Sbjct: 685 IVVLDKLIT 693>XP_006720691 Length = 1182 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IAILDKLIT 9 I +LDKLIT Sbjct: 672 IVVLDKLIT 680>XP_006720690 Length = 1245 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IAILDKLIT 9 I +LDKLIT Sbjct: 672 IVVLDKLIT 680>XP_005254635 Length = 1280 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IAILDKLIT 9 I +LDKLIT Sbjct: 672 IVVLDKLIT 680>NP_005224 Length = 983 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IAILDKLI 8 ++ILDKLI Sbjct: 875 VSILDKLI 882>NP_004422 Length = 976 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IAILDKLI 8 ++ILDKLI Sbjct: 868 VSILDKLI 875>XP_005264773 Length = 918 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IAILDKLI 8 ++ILDKLI Sbjct: 875 VSILDKLI 882>XP_005264772 Length = 982 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IAILDKLI 8 ++ILDKLI Sbjct: 874 VSILDKLI 881>XP_005245809 Length = 922 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IAILDKLI 8 ++ILDKLI Sbjct: 814 VSILDKLI 821>XP_005245808 Length = 965 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IAILDKLI 8 ++ILDKLI Sbjct: 857 VSILDKLI 864>NP_001182502 Length = 1829 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 AILDKLIT 9 AILD LIT Sbjct: 1710 AILDYLIT 1717>NP_001258211 Length = 1922 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 AILDKLIT 9 AILD LIT Sbjct: 1710 AILDYLIT 1717>NP_085124 Length = 1922 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 AILDKLIT 9 AILD LIT Sbjct: 1710 AILDYLIT 1717>NP_803187 Length = 1922 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 AILDKLIT 9 AILD LIT Sbjct: 1710 AILDYLIT 1717>NP_001262 Length = 1828 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IAILDKLIT 9 + +LDKL+T Sbjct: 793 LILLDKLLT 801>NP_775922 Length = 6996 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AILDKLIT 9 AIL+KL+T Sbjct: 915 AILEKLMT 922>NP_079421 Length = 1665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IAILDKL 7 IA+LDK+ Sbjct: 1554 IAVLDKM 1560>NP_001275558 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IAILDKLI 8 + ILDK+I Sbjct: 882 VGILDKMI 889>NP_001156 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IAILDKLIT 9 I ILD L+T Sbjct: 462 IPILDSLLT 470>NP_892007 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IAILDKLIT 9 I ILD L+T Sbjct: 462 IPILDSLLT 470>NP_775819 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AILDKLIT 9 A+LD LIT Sbjct: 173 ALLDHLIT 180>NP_004431 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IAILDKLI 8 + ILDK+I Sbjct: 887 VGILDKMI 894>XP_005258685 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AILDKLIT 9 A+LD LIT Sbjct: 165 ALLDHLIT 172>XP_005270233 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IAILDKL 7 IA+LDK+ Sbjct: 816 IAVLDKM 822>XP_005270231 Length = 1627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IAILDKL 7 IA+LDK+ Sbjct: 1516 IAVLDKM 1522>XP_005270230 Length = 1627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IAILDKL 7 IA+LDK+ Sbjct: 1516 IAVLDKM 1522>XP_005270229 Length = 1637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IAILDKL 7 IA+LDK+ Sbjct: 1526 IAVLDKM 1532>XP_005270228 Length = 1666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IAILDKL 7 IA+LDK+ Sbjct: 1555 IAVLDKM 1561>XP_006715432 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IAILDKLI 8 + ILDK+I Sbjct: 499 VGILDKMI 506>XP_005248726 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IAILDKLI 8 + ILDK+I Sbjct: 883 VGILDKMI 890Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.154 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 441,488 Number of extensions: 737 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |