Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 20 299 NP_055796 17 2528 NP_001155130 17 4312 NP_001155128 17 4312 NP_001123645 17 4312 NP_001185471 16 5631 NP_001185472 16 5631 NP_060028 16 5631 NP_001257903 16 5631 NP_079225 16 5631 NP_001029345 16 5631 XP_006721269 16 5631 XP_006714376 16 5631 XP_006714375 16 5631 NP_001243779 16 7355 NP_596869 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_001254479 16 7355 NP_001020605 15 9605 NP_001020604 15 9605 NP_000894 15 9605 NP_001273066 15 9605 NP_001257293 15 9605 NP_001535 15 9605 NP_036322 15 9605 NP_001165102 15 9605 NP_001257294 15 9605 NP_443178 15 9605 NP_001165103 15 9605 NP_071772 15 9605 NP_001034813 15 9605 XP_006713545 15 9605 XP_006713544 15 9605 XP_005246327 15 9605 XP_006712296 15 9605 NP_777638 15 9605 NP_001034221 15 9605>NP_005350 Length = 552 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HIGKSVQLE 9 HIGK VQLE Sbjct: 382 HIGKGVQLE 390>NP_055796 Length = 1946 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HIGKSVQLE 9 H GKSV L+ Sbjct: 568 HFGKSVHLQ 576>NP_001155130 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HIGKSVQLE 9 H GK++QL+ Sbjct: 410 HTGKALQLQ 418>NP_001155128 Length = 758 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HIGKSVQLE 9 H GK++QL+ Sbjct: 423 HTGKALQLQ 431>NP_001123645 Length = 761 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HIGKSVQLE 9 H GK++QL+ Sbjct: 426 HTGKALQLQ 434>NP_001185471 Length = 950 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 HIGKSVQLE 9 ++G+S+QLE Sbjct: 278 NVGESMQLE 286>NP_001185472 Length = 940 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 HIGKSVQLE 9 ++G+S+QLE Sbjct: 268 NVGESMQLE 276>NP_060028 Length = 1017 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 HIGKSVQLE 9 ++G+S+QLE Sbjct: 251 NVGESMQLE 259>NP_001257903 Length = 5121 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 HIGKSVQLE 9 ++G+S+QLE Sbjct: 251 NVGESMQLE 259>NP_079225 Length = 1192 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HIGKSVQLE 9 HI K+ Q+E Sbjct: 78 HINKTTQIE 86>NP_001029345 Length = 923 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HIGKSVQ 7 HIG SVQ Sbjct: 543 HIGMSVQ 549>XP_006721269 Length = 5138 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 HIGKSVQLE 9 ++G+S+QLE Sbjct: 268 NVGESMQLE 276>XP_006714376 Length = 815 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HIGKSVQLE 9 HI K+ Q+E Sbjct: 78 HINKTTQIE 86>XP_006714375 Length = 1208 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HIGKSVQLE 9 HI K+ Q+E Sbjct: 78 HINKTTQIE 86>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IGKSVQLE 9 +GK VQL+ Sbjct: 8432 VGKEVQLQ 8439Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKSVQLE 9 G+S+QLE Sbjct: 7306 GESIQLE 7312>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IGKSVQLE 9 +GK VQL+ Sbjct: 7505 VGKEVQLQ 7512Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKSVQLE 9 G+S+QLE Sbjct: 6379 GESIQLE 6385>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IGKSVQLE 9 +GK VQL+ Sbjct: 8433 VGKEVQLQ 8440Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKSVQLE 9 G+S+QLE Sbjct: 7307 GESIQLE 7313>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IGKSVQLE 9 +GK VQL+ Sbjct: 8433 VGKEVQLQ 8440Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKSVQLE 9 G+S+QLE Sbjct: 7307 GESIQLE 7313>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IGKSVQLE 9 +GK VQL+ Sbjct: 8749 VGKEVQLQ 8756Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKSVQLE 9 G+S+QLE Sbjct: 7623 GESIQLE 7629>NP_001020605 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 HIGKSV 6 H+GKS+ Sbjct: 221 HLGKSI 226>NP_001020604 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 HIGKSV 6 H+GKS+ Sbjct: 225 HLGKSI 230>NP_000894 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 HIGKSV 6 H+GKS+ Sbjct: 259 HLGKSI 264>NP_001273066 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 HIGKSV 6 H+GKS+ Sbjct: 187 HLGKSI 192>NP_001257293 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HIGKSVQ 7 H+G S+Q Sbjct: 532 HVGMSIQ 538>NP_001535 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKSVQL 8 GKSVQL Sbjct: 62 GKSVQL 67>NP_036322 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HIGKSVQ 7 H+G S+Q Sbjct: 522 HVGMSIQ 528>NP_001165102 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IGKSVQLE 9 +GK+++LE Sbjct: 89 LGKAIELE 96>NP_001257294 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HIGKSVQ 7 H+G S+Q Sbjct: 421 HVGMSIQ 427>NP_443178 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IGKSVQLE 9 +GK+++LE Sbjct: 11 LGKAIELE 18>NP_001165103 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IGKSVQLE 9 +GK+++LE Sbjct: 61 LGKAIELE 68>NP_071772 Length = 237 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKSVQL 8 GKSVQL Sbjct: 62 GKSVQL 67>NP_001034813 Length = 506 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IGKSVQLE 9 +GK+++LE Sbjct: 89 LGKAIELE 96>XP_006713545 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HIGKSVQ 7 H+G S+Q Sbjct: 520 HVGMSIQ 526>XP_006713544 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HIGKSVQ 7 H+G S+Q Sbjct: 522 HVGMSIQ 528>XP_005246327 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IGKSVQLE 9 +GK+++LE Sbjct: 89 LGKAIELE 96>XP_006712296 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IGKSVQLE 9 +GK+++LE Sbjct: 89 LGKAIELE 96>NP_777638 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HIGKSVQ 7 H GKS++ Sbjct: 399 HFGKSIE 405>NP_001034221 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GKSVQL 8 GKSVQL Sbjct: 62 GKSVQL 67Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.132 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 476,651 Number of extensions: 525 Number of successful extensions: 43 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |