Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001257436 21 229 NP_001257437 21 229 NP_006281 21 229 XP_006715618 21 229 XP_005267176 21 229 NP_063945 17 2528 XP_006717250 17 2528 NP_001157951 16 5631 NP_443076 16 5631 NP_690051 16 5631 NP_006038 16 5631 NP_001185769 16 5631 NP_001185767 16 5631 NP_078945 16 5631 XP_005250515 16 5631 XP_005250514 16 5631 XP_006714754 16 5631 XP_005248656 16 5631 NP_061877 16 5631 NP_001186732 16 7355 NP_077298 16 7355 NP_015628 16 7355 NP_115570 16 7355 NP_001276040 16 7355 XP_005257785 16 7355 XP_006712165 16 7355 NP_000279 15 9605 NP_079535 15 9605 NP_751898 15 9605 NP_002432 15 9605 NP_751897 15 9605 NP_001257449 15 9605 NP_777612 15 9605 NP_055807 15 9605 NP_003986 15 9605 NP_005384 15 9605 NP_054825 15 9605 NP_001092275 15 9605 NP_001012421 15 9605 NP_001005739 15 9605 NP_001156729 15 9605 NP_001243549 15 9605 NP_057600 15 9605 NP_001012419 15 9605 XP_006725221 15 9605 XP_006723739 15 9605 XP_005267488 15 9605 XP_005267487 15 9605 XP_006717832 15 9605 XP_006717831 15 9605 XP_005272582 15 9605 XP_006716841 15 9605 XP_005251535 15 9605 XP_005272576 15 9605 XP_005267076 15 9605 XP_006712092 15 9605 XP_006710328 15 9605 NP_612478 15 9605 NP_055287 15 9605 NP_001243548 15 9605>NP_001257436 Length = 790 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HFASASGKV 9 HFA+ASGKV Sbjct: 636 HFAAASGKV 644>NP_001257437 Length = 790 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HFASASGKV 9 HFA+ASGKV Sbjct: 636 HFAAASGKV 644>NP_006281 Length = 790 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HFASASGKV 9 HFA+ASGKV Sbjct: 636 HFAAASGKV 644>XP_006715618 Length = 577 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HFASASGKV 9 HFA+ASGKV Sbjct: 423 HFAAASGKV 431>XP_005267176 Length = 790 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HFASASGKV 9 HFA+ASGKV Sbjct: 636 HFAAASGKV 644>NP_063945 Length = 644 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 HF S GKV Sbjct: 424 HFTSGDGKV 432>XP_006717250 Length = 610 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 HF S GKV Sbjct: 390 HFTSGDGKV 398>NP_001157951 Length = 138 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HFASASGK 8 H AS SGK Sbjct: 81 HMASQSGK 88>NP_443076 Length = 536 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FASASGK 8 FA+ASGK Sbjct: 451 FAAASGK 457>NP_690051 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FASASGK 8 FAS+SGK Sbjct: 846 FASSSGK 852>NP_006038 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FASASGK 8 FAS+SGK Sbjct: 846 FASSSGK 852>NP_001185769 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FASASGK 8 FAS+SGK Sbjct: 846 FASSSGK 852>NP_001185767 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FASASGK 8 FAS+SGK Sbjct: 846 FASSSGK 852>NP_078945 Length = 614 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 HFASASGK 8 H+A+A+GK Sbjct: 270 HWAAAAGK 277>XP_005250515 Length = 1083 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HFASASG 7 H+A+ASG Sbjct: 150 HYAAASG 156>XP_005250514 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HFASASG 7 H+A+ASG Sbjct: 150 HYAAASG 156>XP_006714754 Length = 452 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 HFASASGK 8 H+A+A+GK Sbjct: 108 HWAAAAGK 115>XP_005248656 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 HFASASGK 8 H+A+A+GK Sbjct: 147 HWAAAAGK 154>NP_061877 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HFASASG 7 H+A+ASG Sbjct: 150 HYAAASG 156>NP_001186732 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 HF SGK+ Sbjct: 103 HFTGLSGKL 111>NP_077298 Length = 300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 HF SGK+ Sbjct: 109 HFTGLSGKL 117>NP_015628 Length = 1119 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HFASASGKV 9 HFA++ G++ Sbjct: 451 HFAASYGRI 459>NP_115570 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HFASASGKV 9 HF + +GK+ Sbjct: 185 HFTALNGKI 193>NP_001276040 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HFASASGKV 9 HF + +GK+ Sbjct: 122 HFTALNGKI 130>XP_005257785 Length = 1887 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HFASASG 7 HF+ ASG Sbjct: 133 HFSQASG 139>XP_006712165 Length = 300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 HF SGK+ Sbjct: 109 HFTGLSGKL 117>NP_000279 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FASASG 7 FASASG Sbjct: 171 FASASG 176>NP_079535 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 H AS GKV Sbjct: 390 HIASLIGKV 398>NP_751898 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 H AS GKV Sbjct: 373 HIASLIGKV 381>NP_002432 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 H AS GKV Sbjct: 373 HIASLIGKV 381>NP_751897 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 H AS GKV Sbjct: 373 HIASLIGKV 381>NP_001257449 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 HF +GK+ Sbjct: 949 HFGEEAGKI 957>NP_777612 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HFASASGK 8 HF ++SG+ Sbjct: 142 HFGNSSGR 149>NP_055807 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 HF +GK+ Sbjct: 959 HFGEEAGKI 967>NP_003986 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HFASASGKV 9 HF A+G++ Sbjct: 215 HFIRANGRI 223>NP_005384 Length = 1909 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FASASG 7 FASASG Sbjct: 1133 FASASG 1138>NP_054825 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FASASGKV 9 FA+ SGK+ Sbjct: 315 FAARSGKI 322>NP_001092275 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 H A ASG V Sbjct: 72 HLACASGHV 80>NP_001012421 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 H A ASG V Sbjct: 72 HLACASGHV 80>NP_001005739 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HFASASGK 8 HF +A GK Sbjct: 175 HFNTAGGK 182>NP_001156729 Length = 1932 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FASASG 7 FASASG Sbjct: 1156 FASASG 1161>NP_001243549 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HFASASGKV 9 HF ++GK+ Sbjct: 454 HFTESTGKL 462>NP_057600 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HFASASGK 8 HF +A GK Sbjct: 187 HFNTAGGK 194>NP_001012419 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 H A ASG V Sbjct: 72 HLACASGHV 80>XP_006725221 Length = 165 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 H A ASG V Sbjct: 72 HLACASGHV 80>XP_006723739 Length = 165 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 H A ASG V Sbjct: 72 HLACASGHV 80>XP_005267488 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 HF +GK+ Sbjct: 959 HFGEEAGKI 967>XP_005267487 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 HF +GK+ Sbjct: 959 HFGEEAGKI 967>XP_006717832 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HFASASGKV 9 HF ++GK+ Sbjct: 454 HFTESTGKL 462>XP_006717831 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HFASASGKV 9 HF ++GK+ Sbjct: 454 HFTESTGKL 462>XP_005272582 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 H A ASG V Sbjct: 72 HLACASGHV 80>XP_006716841 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HFASASGKV 9 HF A+G++ Sbjct: 215 HFIRANGRI 223>XP_005251535 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HFASASGKV 9 HF A+G++ Sbjct: 215 HFIRANGRI 223>XP_005272576 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 H A ASG V Sbjct: 72 HLACASGHV 80>XP_005267076 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FASASG 7 FASASG Sbjct: 133 FASASG 138>XP_006712092 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HFASASGK 8 HF +A GK Sbjct: 187 HFNTAGGK 194>XP_006710328 Length = 165 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HFASASGKV 9 H A ASG V Sbjct: 72 HLACASGHV 80>NP_612478 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HFASASGKV 9 HF ++GK+ Sbjct: 454 HFTESTGKL 462>NP_055287 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HFASASGKV 9 HF ++GK+ Sbjct: 454 HFTESTGKL 462>NP_001243548 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HFASASGKV 9 HF ++GK+ Sbjct: 454 HFTESTGKL 462Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.120 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 513,174 Number of extensions: 1064 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |