Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 19 665 XP_006718908 19 665 XP_005271621 19 665 XP_006718907 19 665 XP_006718906 19 665 XP_005271619 19 665 XP_005271618 19 665 NP_573439 17 2528 NP_573438 17 2528 NP_001181930 17 2528 NP_005695 17 2528 XP_006710336 17 2528 XP_006710335 17 2528 XP_006710334 17 2528 XP_006710333 17 2528 XP_006710332 17 2528 NP_597677 17 3301 NP_056199 17 3301 XP_005248340 17 3301 XP_005248339 17 3301 XP_005248337 17 3301 XP_006714531 17 3301 XP_006714530 17 3301 NP_776165 17 4312 NP_005350 16 5631 NP_001123633 16 5631 XP_006717757 16 5631 XP_006717756 16 5631 NP_689922 16 5631 NP_057422 16 7355 NP_001032203 16 7355 NP_068579 16 7355 XP_005250580 16 7355 NP_001128251 16 7355 NP_001006618 15 9605 NP_001006620 15 9605 NP_077022 15 9605 NP_001006621 15 9605 NP_001006622 15 9605 NP_001004751 15 9605 NP_055524 15 9605 NP_066282 15 9605 NP_065908 15 9605>NP_000042 Length = 3056 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVIMQTYL 9 AVIMQTYL Sbjct: 2354 AVIMQTYL 2361>XP_006718908 Length = 1708 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVIMQTYL 9 AVIMQTYL Sbjct: 1006 AVIMQTYL 1013>XP_005271621 Length = 2708 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVIMQTYL 9 AVIMQTYL Sbjct: 2006 AVIMQTYL 2013>XP_006718907 Length = 3050 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVIMQTYL 9 AVIMQTYL Sbjct: 2348 AVIMQTYL 2355>XP_006718906 Length = 3056 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVIMQTYL 9 AVIMQTYL Sbjct: 2354 AVIMQTYL 2361>XP_005271619 Length = 3056 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVIMQTYL 9 AVIMQTYL Sbjct: 2354 AVIMQTYL 2361>XP_005271618 Length = 3056 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVIMQTYL 9 AVIMQTYL Sbjct: 2354 AVIMQTYL 2361>NP_573439 Length = 1436 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HAVIMQTY 8 HAV +QTY Sbjct: 335 HAVSLQTY 342>NP_573438 Length = 1440 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HAVIMQTY 8 HAV +QTY Sbjct: 335 HAVSLQTY 342>NP_001181930 Length = 1433 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HAVIMQTY 8 HAV +QTY Sbjct: 335 HAVSLQTY 342>NP_005695 Length = 1446 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HAVIMQTY 8 HAV +QTY Sbjct: 335 HAVSLQTY 342>XP_006710336 Length = 1177 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HAVIMQTY 8 HAV +QTY Sbjct: 70 HAVSLQTY 77>XP_006710335 Length = 1370 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HAVIMQTY 8 HAV +QTY Sbjct: 263 HAVSLQTY 270>XP_006710334 Length = 1292 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HAVIMQTY 8 HAV +QTY Sbjct: 335 HAVSLQTY 342>XP_006710333 Length = 1439 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HAVIMQTY 8 HAV +QTY Sbjct: 335 HAVSLQTY 342>XP_006710332 Length = 1442 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HAVIMQTY 8 HAV +QTY Sbjct: 335 HAVSLQTY 342>NP_597677 Length = 2804 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HAVIMQTYL 9 HA+ MQ YL Sbjct: 2023 HAMTMQPYL 2031>NP_056199 Length = 2697 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HAVIMQTYL 9 HA+ MQ YL Sbjct: 2023 HAMTMQPYL 2031>XP_005248340 Length = 2265 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HAVIMQTYL 9 HA+ MQ YL Sbjct: 1484 HAMTMQPYL 1492>XP_005248339 Length = 2584 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HAVIMQTYL 9 HA+ MQ YL Sbjct: 1803 HAMTMQPYL 1811>XP_005248337 Length = 2698 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HAVIMQTYL 9 HA+ MQ YL Sbjct: 2023 HAMTMQPYL 2031>XP_006714531 Length = 2738 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HAVIMQTYL 9 HA+ MQ YL Sbjct: 1957 HAMTMQPYL 1965>XP_006714530 Length = 2755 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HAVIMQTYL 9 HA+ MQ YL Sbjct: 2023 HAMTMQPYL 2031>NP_776165 Length = 226 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HAVIMQTY 8 H VIM TY Sbjct: 199 HLVIMTTY 206>NP_005350 Length = 552 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HAVIMQTY 8 HAV +Q+Y Sbjct: 405 HAVFVQSY 412>NP_001123633 Length = 989 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAVIMQTY 8 H V+MQ Y Sbjct: 377 HTVLMQKY 384>XP_006717757 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAVIMQTY 8 H V+MQ Y Sbjct: 267 HTVLMQKY 274>XP_006717756 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAVIMQTY 8 H V+MQ Y Sbjct: 267 HTVLMQKY 274>NP_689922 Length = 989 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAVIMQTY 8 H V+MQ Y Sbjct: 377 HTVLMQKY 384>NP_057422 Length = 975 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HAVIMQTYL 9 + V+M TYL Sbjct: 784 YPVVMSTYL 792>NP_001032203 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HAVIMQTYL 9 HA+ M YL Sbjct: 449 HAISMSAYL 457>NP_068579 Length = 974 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HAVIMQTYL 9 HA+ M YL Sbjct: 449 HAISMSAYL 457>XP_005250580 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HAVIMQTYL 9 HA+ M YL Sbjct: 449 HAISMSAYL 457>NP_001128251 Length = 1015 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HAVIMQTYL 9 + V+M TYL Sbjct: 824 YPVVMSTYL 832>NP_001006618 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HAVIMQTYL 9 HA+ TYL Sbjct: 450 HAIFKLTYL 458>NP_001006620 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HAVIMQTYL 9 HA+ TYL Sbjct: 403 HAIFKLTYL 411>NP_077022 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HAVIMQTYL 9 HA+ TYL Sbjct: 414 HAIFKLTYL 422>NP_001006621 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HAVIMQTYL 9 HA+ TYL Sbjct: 258 HAIFKLTYL 266>NP_001006622 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HAVIMQTYL 9 HA+ TYL Sbjct: 258 HAIFKLTYL 266>NP_001004751 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HAVIMQTYL 9 H V+ TYL Sbjct: 285 HVVMANTYL 293>NP_055524 Length = 3546 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HAVIMQTY 8 HA+ M+TY Sbjct: 1042 HAMGMETY 1049>NP_066282 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAVIMQTY 8 H VI QT+ Sbjct: 81 HEVIQQTF 88>NP_065908 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVIMQTY 8 AVIMQ Y Sbjct: 560 AVIMQDY 566Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.136 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 371,859 Number of extensions: 679 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |