Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 869 NP_001263689 19 869 NP_001119584 19 869 NP_001119586 19 869 NP_001263625 19 869 NP_001119590 19 869 NP_001263690 19 869 NP_001119585 19 869 NP_001263624 19 869 NP_001119588 19 869 NP_001119587 19 869 NP_001119589 19 869 NP_037466 17 2528 NP_068806 17 2528 NP_002821 17 3301 NP_005378 17 4312 NP_624357 17 4312 NP_624358 17 4312 NP_057404 17 4312 XP_006718305 17 4312 XP_006718304 17 4312 XP_006718303 17 4312 XP_005253007 17 4312 NP_899200 16 5631 NP_995319 16 5631 NP_037467 16 5631 XP_005247134 16 5631 XP_005246544 16 5631 XP_005246543 16 5631 XP_005246542 16 5631 XP_005246540 16 5631 NP_543011 16 5631 NP_001099010 16 7355 XP_006718417 16 7355 XP_005253237 16 7355 XP_005253236 16 7355 NP_065908 16 7355 NP_003931 15 9605 NP_001027453 15 9605 NP_005646 15 9605 NP_689576 15 9605 NP_001265372 15 9605 NP_001265373 15 9605 NP_002499 15 9605 NP_942559 15 9605 NP_001265374 15 9605 XP_006713069 15 9605 XP_005264968 15 9605 XP_005264967 15 9605 XP_006711834 15 9605 NP_001127934 15 9605>NP_000537 Length = 393 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTRVR MAI Sbjct: 154 GTRVRAMAI 162>NP_001263689 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTRVR MAI Sbjct: 115 GTRVRAMAI 123>NP_001119584 Length = 393 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTRVR MAI Sbjct: 154 GTRVRAMAI 162>NP_001119586 Length = 341 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTRVR MAI Sbjct: 154 GTRVRAMAI 162>NP_001263625 Length = 302 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTRVR MAI Sbjct: 115 GTRVRAMAI 123>NP_001119590 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTRVR MAI Sbjct: 115 GTRVRAMAI 123>NP_001263690 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTRVR MAI Sbjct: 115 GTRVRAMAI 123>NP_001119585 Length = 346 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTRVR MAI Sbjct: 154 GTRVRAMAI 162>NP_001263624 Length = 307 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTRVR MAI Sbjct: 115 GTRVRAMAI 123>NP_001119588 Length = 209 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTRVR MAI Sbjct: 22 GTRVRAMAI 30>NP_001119587 Length = 261 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTRVR MAI Sbjct: 22 GTRVRAMAI 30>NP_001119589 Length = 214 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTRVR MAI Sbjct: 22 GTRVRAMAI 30>NP_037466 Length = 387 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTR+RP+ + Sbjct: 11 GTRLRPLTL 19>NP_068806 Length = 360 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTR+RP+ + Sbjct: 11 GTRLRPLTL 19>NP_002821 Length = 926 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTRVRPMAI 9 GTR+RP ++ Sbjct: 408 GTRLRPSSV 416>NP_005378 Length = 937 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRVRPMAI 9 TRVRP A+ Sbjct: 558 TRVRPKAL 565>NP_624357 Length = 920 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRVRPMAI 9 TRVRP A+ Sbjct: 541 TRVRPKAL 548>NP_624358 Length = 1726 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRVRPMAI 9 TRVRP A+ Sbjct: 541 TRVRPKAL 548>NP_057404 Length = 1800 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRVRPMAI 9 TRVRP A+ Sbjct: 541 TRVRPKAL 548>XP_006718305 Length = 1743 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRVRPMAI 9 TRVRP A+ Sbjct: 558 TRVRPKAL 565>XP_006718304 Length = 1753 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRVRPMAI 9 TRVRP A+ Sbjct: 494 TRVRPKAL 501>XP_006718303 Length = 1792 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRVRPMAI 9 TRVRP A+ Sbjct: 533 TRVRPKAL 540>XP_005253007 Length = 1817 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRVRPMAI 9 TRVRP A+ Sbjct: 558 TRVRPKAL 565>NP_899200 Length = 1261 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTRVRPMAI 9 GT VRP ++ Sbjct: 148 GTEVRPRSV 156>NP_995319 Length = 420 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRPMA 8 GTR RP++ Sbjct: 14 GTRFRPLS 21>NP_037467 Length = 420 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRPMA 8 GTR RP++ Sbjct: 14 GTRFRPLS 21>XP_005247134 Length = 1286 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTRVRPMAI 9 GT VRP ++ Sbjct: 148 GTEVRPRSV 156>XP_005246544 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRPMA 8 GTR RP++ Sbjct: 14 GTRFRPLS 21>XP_005246543 Length = 420 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRPMA 8 GTR RP++ Sbjct: 14 GTRFRPLS 21>XP_005246542 Length = 425 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRPMA 8 GTR RP++ Sbjct: 14 GTRFRPLS 21>XP_005246540 Length = 425 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRPMA 8 GTR RP++ Sbjct: 14 GTRFRPLS 21>NP_543011 Length = 192 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTRVRPMA 8 G RVRP A Sbjct: 15 GARVRPRA 22>NP_001099010 Length = 1117 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TRVRPMA 8 TRVRP++ Sbjct: 215 TRVRPLS 221>XP_006718417 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TRVRPMA 8 TRVRP++ Sbjct: 215 TRVRPLS 221>XP_005253237 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TRVRPMA 8 TRVRP++ Sbjct: 258 TRVRPLS 264>XP_005253236 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TRVRPMA 8 TRVRP++ Sbjct: 258 TRVRPLS 264>NP_065908 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRPMA 8 G +VRP+A Sbjct: 128 GQKVRPLA 135>NP_003931 Length = 863 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GTRVRPM 7 GT+++PM Sbjct: 324 GTKLKPM 330>NP_001027453 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRPMA 8 GTR+ P+A Sbjct: 327 GTRLSPIA 334>NP_005646 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRPMA 8 GTR+ P+A Sbjct: 338 GTRLSPIA 345>NP_689576 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 GTRVRP 6 GTR RP Sbjct: 544 GTRARP 549>NP_001265372 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 GTRVRP 6 GTR RP Sbjct: 507 GTRARP 512>NP_001265373 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 GTRVRP 6 GTR RP Sbjct: 518 GTRARP 523>NP_002499 Length = 1247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 GTRVRP 6 GTR RP Sbjct: 908 GTRTRP 913>NP_942559 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GTRVRPMA 8 G R++PM+ Sbjct: 659 GVRIQPMS 666>NP_001265374 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 GTRVRP 6 GTR RP Sbjct: 486 GTRARP 491>XP_006713069 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GTRVRPMA 8 G R++PM+ Sbjct: 659 GVRIQPMS 666>XP_005264968 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GTRVRPMA 8 G R++PM+ Sbjct: 659 GVRIQPMS 666>XP_005264967 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GTRVRPMA 8 G R++PM+ Sbjct: 659 GVRIQPMS 666>XP_006711834 Length = 1156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 GTRVRP 6 GTR RP Sbjct: 817 GTRTRP 822>NP_001127934 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRVRP 6 G+RVRP Sbjct: 16 GSRVRP 21Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.142 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 496,790 Number of extensions: 615 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |