Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 18 1135 NP_001263689 18 1135 NP_001119584 18 1135 NP_001119586 18 1135 NP_001263625 18 1135 NP_001119590 18 1135 NP_001263690 18 1135 NP_001119585 18 1135 NP_001263624 18 1135 NP_001119588 18 1135 NP_001119587 18 1135 NP_001119589 18 1135 NP_775835 17 4312 XP_005250285 17 4312 XP_006715971 17 4312 XP_006715970 17 4312 NP_003144 16 5631 NP_001171549 16 5631 NP_001171550 16 5631 NP_001171551 16 5631 NP_001171552 16 5631 NP_001269404 16 5631 NP_001269403 16 5631 NP_003908 16 5631 XP_005268239 16 5631 XP_005268238 16 5631 XP_005268237 16 5631 XP_005268236 16 5631 XP_005268234 16 5631 XP_005268235 16 5631 XP_005268233 16 5631 XP_005268231 16 5631 XP_005268232 16 5631 XP_005268230 16 5631 XP_005268229 16 5631 XP_005268228 16 5631 XP_006720364 16 5631 XP_005268227 16 5631 XP_005268226 16 5631 XP_005268225 16 5631 XP_005268224 16 5631 XP_005268223 16 5631 XP_006719638 16 5631 XP_006719637 16 5631 XP_006719636 16 5631 NP_114127 16 7355 NP_060658 16 7355 NP_001164007 16 7355 NP_001164006 16 7355 NP_005984 16 7355 XP_006722354 16 7355 XP_005256456 16 7355 XP_006722353 16 7355 XP_005256453 16 7355 XP_005244865 16 7355 XP_005244863 16 7355 XP_006710514 16 7355 NP_001034300 16 7355 NP_001136019 15 9605 NP_775930 15 9605 NP_001013860 15 9605 NP_001229416 15 9605 NP_001229417 15 9605 NP_055852 15 9605 XP_006721205 15 9605 XP_005255864 15 9605 XP_006721204 15 9605 XP_006721203 15 9605 XP_006721202 15 9605 XP_006721201 15 9605 XP_005269821 15 9605 XP_005269712 15 9605 XP_006717788 15 9605 XP_005269710 15 9605 XP_005269709 15 9605 XP_005269708 15 9605 XP_005269706 15 9605 XP_005269705 15 9605 NP_001121687 15 9605>NP_000537 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRDMAI 9 GTRVR MAI Sbjct: 154 GTRVRAMAI 162>NP_001263689 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRDMAI 9 GTRVR MAI Sbjct: 115 GTRVRAMAI 123>NP_001119584 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRDMAI 9 GTRVR MAI Sbjct: 154 GTRVRAMAI 162>NP_001119586 Length = 341 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRDMAI 9 GTRVR MAI Sbjct: 154 GTRVRAMAI 162>NP_001263625 Length = 302 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRDMAI 9 GTRVR MAI Sbjct: 115 GTRVRAMAI 123>NP_001119590 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRDMAI 9 GTRVR MAI Sbjct: 115 GTRVRAMAI 123>NP_001263690 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRDMAI 9 GTRVR MAI Sbjct: 115 GTRVRAMAI 123>NP_001119585 Length = 346 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRDMAI 9 GTRVR MAI Sbjct: 154 GTRVRAMAI 162>NP_001263624 Length = 307 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRDMAI 9 GTRVR MAI Sbjct: 115 GTRVRAMAI 123>NP_001119588 Length = 209 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRDMAI 9 GTRVR MAI Sbjct: 22 GTRVRAMAI 30>NP_001119587 Length = 261 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRDMAI 9 GTRVR MAI Sbjct: 22 GTRVRAMAI 30>NP_001119589 Length = 214 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVRDMAI 9 GTRVR MAI Sbjct: 22 GTRVRAMAI 30>NP_775835 Length = 841 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTRVRDMA 8 G RVRD+A Sbjct: 43 GVRVRDIA 50>XP_005250285 Length = 842 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTRVRDMA 8 G RVRD+A Sbjct: 43 GVRVRDIA 50>XP_006715971 Length = 842 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTRVRDMA 8 G RVRD+A Sbjct: 43 GVRVRDIA 50>XP_006715970 Length = 842 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTRVRDMA 8 G RVRD+A Sbjct: 43 GVRVRDIA 50>NP_003144 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRDMA 8 G R+RD+A Sbjct: 603 GDRIRDLA 610>NP_001171549 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRDMA 8 G R+RD+A Sbjct: 603 GDRIRDLA 610>NP_001171550 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRDMA 8 G R+RD+A Sbjct: 603 GDRIRDLA 610>NP_001171551 Length = 737 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRDMA 8 G R+RD+A Sbjct: 493 GDRIRDLA 500>NP_001171552 Length = 737 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRDMA 8 G R+RD+A Sbjct: 493 GDRIRDLA 500>NP_001269404 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 359 GTHVRDDAV 367>NP_001269403 Length = 404 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 50 GTHVRDDAV 58>NP_003908 Length = 785 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 431 GTHVRDDAV 439>XP_005268239 Length = 575 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 221 GTHVRDDAV 229>XP_005268238 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 522 GTHVRDDAV 530>XP_005268237 Length = 640 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 286 GTHVRDDAV 294>XP_005268236 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 302 GTHVRDDAV 310>XP_005268234 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 302 GTHVRDDAV 310>XP_005268235 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 302 GTHVRDDAV 310>XP_005268233 Length = 690 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 522 GTHVRDDAV 530>XP_005268231 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 359 GTHVRDDAV 367>XP_005268232 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 359 GTHVRDDAV 367>XP_005268230 Length = 785 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 431 GTHVRDDAV 439>XP_005268229 Length = 785 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 431 GTHVRDDAV 439>XP_005268228 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 465 GTHVRDDAV 473>XP_006720364 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 488 GTHVRDDAV 496>XP_005268227 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 488 GTHVRDDAV 496>XP_005268226 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 488 GTHVRDDAV 496>XP_005268225 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 488 GTHVRDDAV 496>XP_005268224 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 488 GTHVRDDAV 496>XP_005268223 Length = 876 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVRDMAI 9 GT VRD A+ Sbjct: 522 GTHVRDDAV 530>XP_006719638 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRDMA 8 G R+RD+A Sbjct: 603 GDRIRDLA 610>XP_006719637 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRDMA 8 G R+RD+A Sbjct: 603 GDRIRDLA 610>XP_006719636 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVRDMA 8 G R+RD+A Sbjct: 603 GDRIRDLA 610>NP_114127 Length = 648 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RVRDMAI 9 RVRD+AI Sbjct: 327 RVRDIAI 333>NP_060658 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RVRDMAI 9 RVRD+AI Sbjct: 375 RVRDIAI 381>NP_001164007 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RVRDMAI 9 RVRD+AI Sbjct: 248 RVRDIAI 254>NP_001164006 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RVRDMAI 9 RVRD+AI Sbjct: 327 RVRDIAI 333>NP_005984 Length = 1192 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTRVRDMA 8 GT VRD A Sbjct: 460 GTNVRDAA 467>XP_006722354 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTRVRDMA 8 GT VRD A Sbjct: 28 GTNVRDAA 35>XP_005256456 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTRVRDMA 8 GT VRD A Sbjct: 32 GTNVRDAA 39>XP_006722353 Length = 1165 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTRVRDMA 8 GT VRD A Sbjct: 460 GTNVRDAA 467>XP_005256453 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTRVRDMA 8 GT VRD A Sbjct: 443 GTNVRDAA 450>XP_005244865 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RVRDMAI 9 RVRD+AI Sbjct: 327 RVRDIAI 333>XP_005244863 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RVRDMAI 9 RVRD+AI Sbjct: 327 RVRDIAI 333>XP_006710514 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RVRDMAI 9 RVRD+AI Sbjct: 151 RVRDIAI 157>NP_001034300 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RVRDMAI 9 RVRD+AI Sbjct: 152 RVRDIAI 158>NP_001136019 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GTRVRDMAI 9 GTR RD + Sbjct: 306 GTRARDTPV 314>NP_775930 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GTRVRDMAI 9 GTR RD + Sbjct: 321 GTRARDTPV 329>NP_001013860 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRVRDMAI 9 TR+RDM + Sbjct: 860 TRLRDMRL 867>NP_001229416 Length = 1837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRVRD 6 GTR+RD Sbjct: 65 GTRMRD 70>NP_001229417 Length = 1892 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRVRD 6 GTR+RD Sbjct: 65 GTRMRD 70>NP_055852 Length = 1842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRVRD 6 GTR+RD Sbjct: 65 GTRMRD 70>XP_006721205 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRVRDMAI 9 TR+RDM + Sbjct: 860 TRLRDMRL 867>XP_005255864 Length = 1372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRVRDMAI 9 TR+RDM + Sbjct: 824 TRLRDMRL 831>XP_006721204 Length = 1405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRVRDMAI 9 TR+RDM + Sbjct: 824 TRLRDMRL 831>XP_006721203 Length = 1408 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRVRDMAI 9 TR+RDM + Sbjct: 860 TRLRDMRL 867>XP_006721202 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRVRDMAI 9 TR+RDM + Sbjct: 860 TRLRDMRL 867>XP_006721201 Length = 1430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRVRDMAI 9 TR+RDM + Sbjct: 860 TRLRDMRL 867>XP_005269821 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RVRDMAI 9 RVRDM + Sbjct: 316 RVRDMTV 322>XP_005269712 Length = 1800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRVRD 6 GTR+RD Sbjct: 65 GTRMRD 70>XP_006717788 Length = 1829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRVRD 6 GTR+RD Sbjct: 65 GTRMRD 70>XP_005269710 Length = 1834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRVRD 6 GTR+RD Sbjct: 65 GTRMRD 70>XP_005269709 Length = 1871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRVRD 6 GTR+RD Sbjct: 65 GTRMRD 70>XP_005269708 Length = 1897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRVRD 6 GTR+RD Sbjct: 65 GTRMRD 70>XP_005269706 Length = 1900 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRVRD 6 GTR+RD Sbjct: 65 GTRMRD 70>XP_005269705 Length = 1905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRVRD 6 GTR+RD Sbjct: 65 GTRMRD 70>NP_001121687 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RVRDMAI 9 RVRDM + Sbjct: 341 RVRDMTV 347Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.142 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 370,846 Number of extensions: 440 Number of successful extensions: 79 Number of sequences better than 10000.0: 79 Number of HSP's gapped: 79 Number of HSP's successfully gapped: 79 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |