Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 18 1482 NP_001263689 18 1482 NP_001119584 18 1482 NP_001119586 18 1482 NP_001263625 18 1482 NP_001119590 18 1482 NP_001263690 18 1482 NP_001119585 18 1482 NP_001263624 18 1482 NP_001119588 18 1482 NP_001119587 18 1482 NP_001119589 18 1482 NP_001073906 18 1935 XP_006712470 18 1935 XP_006712469 18 1935 XP_006712468 18 1935 XP_005247054 18 1935 NP_000262 16 5631 NP_055795 16 5631 NP_001273514 16 5631 NP_006310 16 5631 XP_006722542 16 5631 XP_005258336 16 5631 XP_005258335 16 5631 XP_005258334 16 5631 XP_005255095 16 5631 XP_005247964 16 5631 XP_006713889 16 5631 XP_006713888 16 5631 NP_001036097 16 7355 NP_001036098 16 7355 NP_219489 16 7355 NP_690857 16 7355 NP_612361 16 7355 NP_149034 16 7355 NP_001139269 15 9605 NP_001243452 15 9605 NP_060768 15 9605 NP_001240622 15 9605 XP_006724202 15 9605 XP_005256701 15 9605 XP_005256700 15 9605 XP_006721100 15 9605 XP_006721099 15 9605 XP_006721098 15 9605 XP_006721097 15 9605 XP_006721096 15 9605 XP_006721095 15 9605 XP_006721094 15 9605 XP_006710814 15 9605 XP_005271060 15 9605 XP_006710813 15 9605 NP_004131 15 9605 NP_001397 15 9605>NP_000537 Length = 393 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVGAMAI 9 GTRV AMAI Sbjct: 154 GTRVRAMAI 162>NP_001263689 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVGAMAI 9 GTRV AMAI Sbjct: 115 GTRVRAMAI 123>NP_001119584 Length = 393 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVGAMAI 9 GTRV AMAI Sbjct: 154 GTRVRAMAI 162>NP_001119586 Length = 341 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVGAMAI 9 GTRV AMAI Sbjct: 154 GTRVRAMAI 162>NP_001263625 Length = 302 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVGAMAI 9 GTRV AMAI Sbjct: 115 GTRVRAMAI 123>NP_001119590 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVGAMAI 9 GTRV AMAI Sbjct: 115 GTRVRAMAI 123>NP_001263690 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVGAMAI 9 GTRV AMAI Sbjct: 115 GTRVRAMAI 123>NP_001119585 Length = 346 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVGAMAI 9 GTRV AMAI Sbjct: 154 GTRVRAMAI 162>NP_001263624 Length = 307 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVGAMAI 9 GTRV AMAI Sbjct: 115 GTRVRAMAI 123>NP_001119588 Length = 209 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVGAMAI 9 GTRV AMAI Sbjct: 22 GTRVRAMAI 30>NP_001119587 Length = 261 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVGAMAI 9 GTRV AMAI Sbjct: 22 GTRVRAMAI 30>NP_001119589 Length = 214 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRVGAMAI 9 GTRV AMAI Sbjct: 22 GTRVRAMAI 30>NP_001073906 Length = 1413 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GTRVGAMAI 9 GTR+GA+A+ Sbjct: 713 GTRLGAVAL 721>XP_006712470 Length = 1327 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GTRVGAMAI 9 GTR+GA+A+ Sbjct: 713 GTRLGAVAL 721>XP_006712469 Length = 1380 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GTRVGAMAI 9 GTR+GA+A+ Sbjct: 713 GTRLGAVAL 721>XP_006712468 Length = 1413 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GTRVGAMAI 9 GTR+GA+A+ Sbjct: 713 GTRLGAVAL 721>XP_005247054 Length = 1434 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GTRVGAMAI 9 GTR+GA+A+ Sbjct: 713 GTRLGAVAL 721>NP_000262 Length = 1278 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTRVGA 6 GTRVGA Sbjct: 1030 GTRVGA 1035>NP_055795 Length = 1186 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 GTR GA+ I Sbjct: 88 GTRTGAIRI 96>NP_001273514 Length = 168 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GTRVGAM 7 GTR GAM Sbjct: 15 GTRFGAM 21>NP_006310 Length = 213 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GTRVGAM 7 GTR GAM Sbjct: 60 GTRFGAM 66>XP_006722542 Length = 1273 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTRVGA 6 GTRVGA Sbjct: 1047 GTRVGA 1052>XP_005258336 Length = 1286 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTRVGA 6 GTRVGA Sbjct: 1030 GTRVGA 1035>XP_005258335 Length = 1295 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTRVGA 6 GTRVGA Sbjct: 1047 GTRVGA 1052>XP_005258334 Length = 1303 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTRVGA 6 GTRVGA Sbjct: 1047 GTRVGA 1052>XP_005255095 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GTRVGAM 7 GTR GAM Sbjct: 84 GTRFGAM 90>XP_005247964 Length = 1162 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 GTR GA+ I Sbjct: 88 GTRTGAIRI 96>XP_006713889 Length = 1186 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 GTR GA+ I Sbjct: 88 GTRTGAIRI 96>XP_006713888 Length = 1186 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 GTR GA+ I Sbjct: 88 GTRTGAIRI 96>NP_001036097 Length = 152 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTRVGAMA 8 GT+ GAMA Sbjct: 4 GTQEGAMA 11>NP_001036098 Length = 158 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTRVGAMA 8 GT+ GAMA Sbjct: 4 GTQEGAMA 11>NP_219489 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTRVGAMA 8 GT+ GAMA Sbjct: 4 GTQEGAMA 11>NP_690857 Length = 199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTRVGAMA 8 GT+ GAMA Sbjct: 4 GTQEGAMA 11>NP_612361 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TRVGAMAI 9 TR+GA+A+ Sbjct: 290 TRLGALAL 297>NP_149034 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 GTR G+M I Sbjct: 550 GTRSGSMLI 558>NP_001139269 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GTRVGAM 7 G+R+GAM Sbjct: 652 GSRLGAM 658>NP_001243452 Length = 178 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GTRVGAM 7 GTR GAM Sbjct: 67 GTRRGAM 73>NP_060768 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 GT+ AMAI Sbjct: 150 GTKQSAMAI 158>NP_001240622 Length = 497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 GT+ AMAI Sbjct: 94 GTKQSAMAI 102>XP_006724202 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GTRVGAMA 8 GT +GA+A Sbjct: 234 GTHLGALA 241>XP_005256701 Length = 1062 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 GTR GA+ I Sbjct: 52 GTRSGAVKI 60>XP_005256700 Length = 1063 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 GTR GA+ I Sbjct: 52 GTRSGAVKI 60>XP_006721100 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GTRVGAM 7 G+R+GAM Sbjct: 316 GSRLGAM 322>XP_006721099 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GTRVGAM 7 G+R+GAM Sbjct: 316 GSRLGAM 322>XP_006721098 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GTRVGAM 7 G+R+GAM Sbjct: 584 GSRLGAM 590>XP_006721097 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GTRVGAM 7 G+R+GAM Sbjct: 652 GSRLGAM 658>XP_006721096 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GTRVGAM 7 G+R+GAM Sbjct: 652 GSRLGAM 658>XP_006721095 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GTRVGAM 7 G+R+GAM Sbjct: 652 GSRLGAM 658>XP_006721094 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GTRVGAM 7 G+R+GAM Sbjct: 652 GSRLGAM 658>XP_006710814 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 GT+ AMAI Sbjct: 150 GTKQSAMAI 158>XP_005271060 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 GT+ AMAI Sbjct: 150 GTKQSAMAI 158>XP_006710813 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 GT+ AMAI Sbjct: 150 GTKQSAMAI 158>NP_004131 Length = 1064 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 GTR GA+ I Sbjct: 52 GTRSGAVKI 60>NP_001397 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTRVGAMAI 9 G RVGA+ + Sbjct: 10 GVRVGALLL 18Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.137 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 309,337 Number of extensions: 284 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |