Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001155973                                                           20     390
NP_001020014                                                           20     390
NP_055903                                                              20     390
NP_001272986                                                           17    2528
NP_001105                                                              17    2528
XP_005255843                                                           17    2528
XP_005255841                                                           17    2528
XP_005255840                                                           17    2528
XP_005255839                                                           17    2528
XP_005255837                                                           17    2528
XP_005255838                                                           17    2528
XP_005255836                                                           17    2528
NP_803875                                                              17    2528
NP_619639                                                              17    3301
NP_733842                                                              17    3301
NP_005076                                                              17    3301
NP_002546                                                              17    3301
NP_899056                                                              17    3301
XP_006725190                                                           17    3301
XP_006718306                                                           17    3301
XP_005253009                                                           17    3301
XP_005272276                                                           17    3301
XP_005272275                                                           17    3301
XP_006717355                                                           17    3301
XP_005272274                                                           17    3301
XP_005272273                                                           17    3301
NP_722576                                                              17    4312
XP_005262424                                                           17    4312
NP_001128653                                                           16    5631
NP_001011547                                                           16    5631
NP_001266282                                                           16    5631
NP_068591                                                              16    5631
NP_001266284                                                           16    5631
NP_775871                                                              16    5631
NP_009190                                                              16    5631
NP_001266283                                                           16    5631
XP_006711659                                                           16    5631
XP_005277493                                                           16    5631
XP_005277492                                                           16    5631
XP_005277490                                                           16    5631
XP_005277491                                                           16    5631
XP_005277489                                                           16    5631
NP_003628                                                              16    5631
NP_006601                                                              16    7355
NP_001273145                                                           16    7355
NP_005112                                                              16    7355
NP_004752                                                              16    7355
NP_061969                                                              16    7355
NP_001230667                                                           16    7355
XP_005275492                                                           16    7355
XP_005275491                                                           16    7355
XP_005275332                                                           16    7355
XP_005275331                                                           16    7355
XP_005275330                                                           16    7355
XP_005275063                                                           16    7355
XP_005275062                                                           16    7355
XP_005275061                                                           16    7355
XP_005272907                                                           16    7355
XP_005272906                                                           16    7355
XP_005272905                                                           16    7355
XP_005268810                                                           16    7355
XP_005268809                                                           16    7355
XP_005249315                                                           16    7355
XP_005249314                                                           16    7355
XP_005249313                                                           16    7355
XP_006715187                                                           16    7355
NP_036416                                                              16    7355
NP_997244                                                              15    9605
NP_001193583                                                           15    9605
NP_006303                                                              15    9605
NP_001070729                                                           15    9605
NP_002574                                                              15    9605
NP_000931                                                              15    9605
NP_940984                                                              15    9605
NP_699200                                                              15    9605
NP_443139                                                              15    9605
NP_005579                                                              15    9605
NP_004682                                                              15    9605
NP_079520                                                              15    9605
NP_955458                                                              15    9605
NP_878915                                                              15    9605
NP_078904                                                              15    9605
NP_001182412                                                           15    9605
NP_037523                                                              15    9605
XP_005261914                                                           15    9605
XP_006723884                                                           15    9605
XP_005253667                                                           15    9605
XP_006719499                                                           15    9605
XP_006719498                                                           15    9605
XP_006719283                                                           15    9605
XP_006719282                                                           15    9605
XP_006714661                                                           15    9605
XP_006712845                                                           15    9605
XP_005264086                                                           15    9605
XP_005264084                                                           15    9605
XP_005264083                                                           15    9605
XP_006712844                                                           15    9605
XP_005264082                                                           15    9605
XP_005264081                                                           15    9605
XP_005264080                                                           15    9605
XP_006712843                                                           15    9605
XP_005264079                                                           15    9605
XP_006711306                                                           15    9605
XP_005245103                                                           15    9605
XP_005245102                                                           15    9605
NP_004277                                                              15    9605
NP_002013                                                              15    9605
NP_076417                                                              15    9605
>NP_001155973
          Length = 1833

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    GSVLGGTTT 9
            GSVLGGT T
Sbjct: 1503 GSVLGGTAT 1511
>NP_001020014
          Length = 1029

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   GSVLGGTTT 9
           GSVLGGT T
Sbjct: 699 GSVLGGTAT 707
>NP_055903
          Length = 1723

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    GSVLGGTTT 9
            GSVLGGT T
Sbjct: 1393 GSVLGGTAT 1401
>NP_001272986
          Length = 734

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   GSVLGGTTT 9
           GS++GG TT
Sbjct: 163 GSLMGGFTT 171
>NP_001105
          Length = 1080

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   GSVLGGTTT 9
           GS++GG TT
Sbjct: 163 GSLMGGFTT 171
>XP_005255843
          Length = 734

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   GSVLGGTTT 9
           GS++GG TT
Sbjct: 163 GSLMGGFTT 171
>XP_005255841
          Length = 1080

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   GSVLGGTTT 9
           GS++GG TT
Sbjct: 163 GSLMGGFTT 171
>XP_005255840
          Length = 1080

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   GSVLGGTTT 9
           GS++GG TT
Sbjct: 163 GSLMGGFTT 171
>XP_005255839
          Length = 1080

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   GSVLGGTTT 9
           GS++GG TT
Sbjct: 163 GSLMGGFTT 171
>XP_005255837
          Length = 1080

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   GSVLGGTTT 9
           GS++GG TT
Sbjct: 163 GSLMGGFTT 171
>XP_005255838
          Length = 1080

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   GSVLGGTTT 9
           GS++GG TT
Sbjct: 163 GSLMGGFTT 171
>XP_005255836
          Length = 1080

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   GSVLGGTTT 9
           GS++GG TT
Sbjct: 163 GSLMGGFTT 171
>NP_803875
          Length = 4243

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GSVLGGTT 8
           GS+ GGTT
Sbjct: 280 GSIRGGTT 287

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSVLGGTT 8
            GS+ GGTT
Sbjct: 1841 GSIGGGTT 1848

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    GSVLGGT 7
            GS+ GGT
Sbjct: 1165 GSIAGGT 1171

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    GSVLGGT 7
            GS+ GGT
Sbjct: 1340 GSLFGGT 1346
>NP_619639
          Length = 4074

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    GSVLGGT 7
            GS+LGGT
Sbjct: 1206 GSLLGGT 1212
>NP_733842
          Length = 3396

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    GSVLGGT 7
            GS+LGGT
Sbjct: 1206 GSLLGGT 1212
>NP_005076
          Length = 2090

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSVLGGTT 8
            GSV GGT+
Sbjct: 1816 GSVFGGTS 1823
>NP_002546
          Length = 424

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   GSVLGGT 7
           GS+LGGT
Sbjct: 167 GSLLGGT 173
>NP_899056
          Length = 424

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   GSVLGGT 7
           GS+LGGT
Sbjct: 167 GSLLGGT 173
>XP_006725190
          Length = 554

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   GSVLGGT 7
           GS+LGGT
Sbjct: 297 GSLLGGT 303
>XP_006718306
          Length = 424

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   GSVLGGT 7
           GS+LGGT
Sbjct: 167 GSLLGGT 173
>XP_005253009
          Length = 509

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   GSVLGGT 7
           GS+LGGT
Sbjct: 252 GSLLGGT 258
>XP_005272276
          Length = 2036

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSVLGGTT 8
            GSV GGT+
Sbjct: 1762 GSVFGGTS 1769
>XP_005272275
          Length = 2083

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSVLGGTT 8
            GSV GGT+
Sbjct: 1809 GSVFGGTS 1816
>XP_006717355
          Length = 2120

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSVLGGTT 8
            GSV GGT+
Sbjct: 1846 GSVFGGTS 1853
>XP_005272274
          Length = 2121

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSVLGGTT 8
            GSV GGT+
Sbjct: 1847 GSVFGGTS 1854
>XP_005272273
          Length = 2132

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSVLGGTT 8
            GSV GGT+
Sbjct: 1858 GSVFGGTS 1865
>NP_722576
          Length = 3080

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   VLGGTTT 9
           V GGTTT
Sbjct: 818 VFGGTTT 824
>XP_005262424
          Length = 2875

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   VLGGTTT 9
           V GGTTT
Sbjct: 613 VFGGTTT 619
>NP_001128653
          Length = 706

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   GSVLGG 6
           GSVLGG
Sbjct: 342 GSVLGG 347
>NP_001011547
          Length = 681

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   GSVLGG 6
           GSVLGG
Sbjct: 317 GSVLGG 322
>NP_001266282
          Length = 538

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VLGGTT 8
           VLGGTT
Sbjct: 426 VLGGTT 431
>NP_068591
          Length = 526

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   GSVLGG 6
           GSVLGG
Sbjct: 122 GSVLGG 127
>NP_001266284
          Length = 447

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VLGGTT 8
           VLGGTT
Sbjct: 408 VLGGTT 413
>NP_775871
          Length = 8384

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GSVLGGTTT 9
            GS+ GGT T
Sbjct: 3747 GSLAGGTGT 3755
>NP_009190
          Length = 570

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VLGGTT 8
           VLGGTT
Sbjct: 531 VLGGTT 536
>NP_001266283
          Length = 534

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   VLGGTT 8
           VLGGTT
Sbjct: 495 VLGGTT 500
>XP_006711659
          Length = 1046

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    GSVLGG 6
            GSVLGG
Sbjct: 1007 GSVLGG 1012
>XP_005277493
          Length = 1105

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    GSVLGG 6
            GSVLGG
Sbjct: 1066 GSVLGG 1071
>XP_005277492
          Length = 1119

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    GSVLGG 6
            GSVLGG
Sbjct: 1080 GSVLGG 1085
>XP_005277490
          Length = 1143

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    GSVLGG 6
            GSVLGG
Sbjct: 1104 GSVLGG 1109
>XP_005277491
          Length = 1143

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    GSVLGG 6
            GSVLGG
Sbjct: 1104 GSVLGG 1109
>XP_005277489
          Length = 1181

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    GSVLGG 6
            GSVLGG
Sbjct: 1142 GSVLGG 1147
>NP_003628
          Length = 1167

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    GSVLGG 6
            GSVLGG
Sbjct: 1128 GSVLGG 1133
>NP_006601
          Length = 686

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VLGGTT 8
           +LGGTT
Sbjct: 462 ILGGTT 467
>NP_001273145
          Length = 514

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   GSVLGGT 7
           G+V+GGT
Sbjct: 335 GTVVGGT 341
>NP_005112
          Length = 2174

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GSVLGGTTT 9
            GSV G +TT
Sbjct: 1933 GSVFGRSTT 1941
>NP_004752
          Length = 777

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 304 SVLGATST 311
>NP_061969
          Length = 602

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   GSVLGGT 7
           G+V+GGT
Sbjct: 423 GTVVGGT 429
>NP_001230667
          Length = 695

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 222 SVLGATST 229
>XP_005275492
          Length = 734

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 222 SVLGATST 229
>XP_005275491
          Length = 816

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 304 SVLGATST 311
>XP_005275332
          Length = 734

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 222 SVLGATST 229
>XP_005275331
          Length = 816

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 304 SVLGATST 311
>XP_005275330
          Length = 816

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 304 SVLGATST 311
>XP_005275063
          Length = 734

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 222 SVLGATST 229
>XP_005275062
          Length = 816

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 304 SVLGATST 311
>XP_005275061
          Length = 816

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 304 SVLGATST 311
>XP_005272907
          Length = 734

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 222 SVLGATST 229
>XP_005272906
          Length = 816

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 304 SVLGATST 311
>XP_005272905
          Length = 816

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 304 SVLGATST 311
>XP_005268810
          Length = 1005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   GSVLGGT 7
           GSVL GT
Sbjct: 876 GSVLSGT 882
>XP_005268809
          Length = 1023

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   GSVLGGT 7
           GSVL GT
Sbjct: 894 GSVLSGT 900
>XP_005249315
          Length = 734

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 222 SVLGATST 229
>XP_005249314
          Length = 816

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 304 SVLGATST 311
>XP_005249313
          Length = 816

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SVLGGTTT 9
           SVLG T+T
Sbjct: 304 SVLGATST 311
>XP_006715187
          Length = 554

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   GSVLGGT 7
           G+V+GGT
Sbjct: 375 GTVVGGT 381
>NP_036416
          Length = 1083

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   GSVLGGT 7
           GSVL GT
Sbjct: 954 GSVLSGT 960
>NP_997244
          Length = 3169

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    SVLGGTT 8
            +V+GGTT
Sbjct: 3113 TVVGGTT 3119
>NP_001193583
          Length = 2504

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GSVLGGTTT 9
            GSV GG+ T
Sbjct: 1191 GSVPGGSIT 1199
>NP_006303
          Length = 2514

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GSVLGGTTT 9
            GSV GG+ T
Sbjct: 1201 GSVPGGSIT 1209
>NP_001070729
          Length = 2458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GSVLGGTTT 9
            GSV GG+ T
Sbjct: 1191 GSVPGGSIT 1199
>NP_002574
          Length = 340

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  SVLGGTTT 9
          S LGG+TT
Sbjct: 10 SGLGGSTT 17
>NP_000931
          Length = 354

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GSVLGGTT 8
           GSVL GT+
Sbjct: 324 GSVLQGTS 331
>NP_940984
          Length = 578

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VLGGTT 8
           V+GGTT
Sbjct: 381 VIGGTT 386
>NP_699200
          Length = 518

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1  GSVLGG 6
          GSV+GG
Sbjct: 48 GSVIGG 53
>NP_443139
          Length = 1078

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   SVLGGTT 8
           ++LGGTT
Sbjct: 208 ALLGGTT 214
>NP_005579
          Length = 746

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSVLGGT 7
           G V+GGT
Sbjct: 720 GMVIGGT 726
>NP_004682
          Length = 351

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   SVLGGTT 8
           ++LGGTT
Sbjct: 198 TLLGGTT 204
>NP_079520
          Length = 698

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   SVLGGT 7
           S+LGGT
Sbjct: 257 SILGGT 262
>NP_955458
          Length = 679

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  GSVLGGTT 8
          GSV  GTT
Sbjct: 12 GSVQSGTT 19
>NP_878915
          Length = 698

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   SVLGGT 7
           S+LGGT
Sbjct: 257 SILGGT 262
>NP_078904
          Length = 714

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   SVLGGTT 8
           SVLGG T
Sbjct: 112 SVLGGQT 118
>NP_001182412
          Length = 714

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   SVLGGTT 8
           SVLGG T
Sbjct: 112 SVLGGQT 118
>NP_037523
          Length = 866

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   GSVLGGTTT 9
           G V+G TT+
Sbjct: 794 GKVVGNTTS 802
>XP_005261914
          Length = 557

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GSVLGGTT 8
           G+V+ GTT
Sbjct: 297 GTVVSGTT 304
>XP_006723884
          Length = 625

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  GSVLGGTT 8
          GSV  GTT
Sbjct: 12 GSVQSGTT 19
>XP_005253667
          Length = 599

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSVLGGT 7
           GS+ GGT
Sbjct: 433 GSISGGT 439
>XP_006719499
          Length = 248

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  SVLGGTTT 9
          S LGG+TT
Sbjct: 10 SGLGGSTT 17
>XP_006719498
          Length = 340

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  SVLGGTTT 9
          S LGG+TT
Sbjct: 10 SGLGGSTT 17
>XP_006719283
          Length = 968

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   SVLGGTT 8
           ++LGGTT
Sbjct: 98  ALLGGTT 104
>XP_006719282
          Length = 968

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   SVLGGTT 8
           ++LGGTT
Sbjct: 98  ALLGGTT 104
>XP_006714661
          Length = 486

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   GSVLGGTTT 9
           G V+G TT+
Sbjct: 414 GKVVGNTTS 422
>XP_006712845
          Length = 698

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   SVLGGT 7
           S+LGGT
Sbjct: 257 SILGGT 262
>XP_005264086
          Length = 698

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   SVLGGT 7
           S+LGGT
Sbjct: 257 SILGGT 262
>XP_005264084
          Length = 698

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   SVLGGT 7
           S+LGGT
Sbjct: 257 SILGGT 262
>XP_005264083
          Length = 698

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   SVLGGT 7
           S+LGGT
Sbjct: 257 SILGGT 262
>XP_006712844
          Length = 698

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   SVLGGT 7
           S+LGGT
Sbjct: 257 SILGGT 262
>XP_005264082
          Length = 698

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   SVLGGT 7
           S+LGGT
Sbjct: 257 SILGGT 262
>XP_005264081
          Length = 698

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   SVLGGT 7
           S+LGGT
Sbjct: 257 SILGGT 262
>XP_005264080
          Length = 698

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   SVLGGT 7
           S+LGGT
Sbjct: 257 SILGGT 262
>XP_006712843
          Length = 891

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   SVLGGT 7
           S+LGGT
Sbjct: 457 SILGGT 462
>XP_005264079
          Length = 893

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   SVLGGT 7
           S+LGGT
Sbjct: 452 SILGGT 457
>XP_006711306
          Length = 381

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSVLGGT 7
           GS+L GT
Sbjct: 198 GSILSGT 204
>XP_005245103
          Length = 495

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSVLGGT 7
           GS+L GT
Sbjct: 312 GSILSGT 318
>XP_005245102
          Length = 508

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSVLGGT 7
           GS+L GT
Sbjct: 325 GSILSGT 331
>NP_004277
          Length = 669

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GSVLGGTT 8
           G+V+ GTT
Sbjct: 409 GTVVSGTT 416
>NP_002013
          Length = 558

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSVLGGT 7
           GS+L GT
Sbjct: 375 GSILSGT 381
>NP_076417
          Length = 672

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSVLGGT 7
           GS+ GGT
Sbjct: 433 GSISGGT 439
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.302    0.128    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 698,782
Number of extensions: 1355
Number of successful extensions: 111
Number of sequences better than 10000.0: 108
Number of HSP's gapped: 111
Number of HSP's successfully gapped: 111
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.2 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package