Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 20 509 XP_005250103 20 509 XP_005250102 20 509 NP_055642 17 4312 XP_005245703 17 4312 XP_006711736 17 4312 XP_005245701 17 4312 XP_005245700 17 4312 NP_006258 16 5631 XP_005264064 16 5631 XP_005264063 16 5631 XP_005264062 16 5631 XP_005264061 16 5631 XP_005264060 16 5631 XP_005264059 16 5631 NP_776255 16 5631 NP_001274745 16 7355 NP_055662 16 7355 NP_149043 16 7355 NP_000515 16 7355 NP_001073892 16 7355 XP_006715500 16 7355 XP_006711752 16 7355 XP_006711751 16 7355 XP_006711750 16 7355 XP_006711749 16 7355 XP_005245729 16 7355 XP_005245727 16 7355 XP_005245726 16 7355 XP_005245725 16 7355 XP_005245724 16 7355 XP_005245715 16 7355 XP_006711748 16 7355 XP_006711747 16 7355 XP_006711746 16 7355 XP_006711745 16 7355 XP_006711744 16 7355 XP_006711743 16 7355 XP_006711742 16 7355 NP_803875 16 7355 NP_116116 15 9605 NP_997243 15 9605 NP_002217 15 9605 NP_660142 15 9605 NP_775871 15 9605 XP_005248296 15 9605 XP_005248295 15 9605 XP_005246847 15 9605 XP_006712769 15 9605 XP_006712768 15 9605 XP_006712767 15 9605 XP_006712766 15 9605 XP_005246846 15 9605 NP_005061 15 9605 NP_001129705 15 9605 NP_055857 15 9605 NP_009208 15 9605 NP_963868 15 9605>NP_004324 Length = 766 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSTTGLSVT 9 GSTTGLS T Sbjct: 393 GSTTGLSAT 401>XP_005250103 Length = 758 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSTTGLSVT 9 GSTTGLS T Sbjct: 393 GSTTGLSAT 401>XP_005250102 Length = 767 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSTTGLSVT 9 GSTTGLS T Sbjct: 393 GSTTGLSAT 401>NP_055642 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TTG+ +T Sbjct: 544 GETTGVDIT 552>XP_005245703 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TTG+ +T Sbjct: 208 GETTGVDIT 216>XP_006711736 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TTG+ +T Sbjct: 544 GETTGVDIT 552>XP_005245701 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TTG+ +T Sbjct: 544 GETTGVDIT 552>XP_005245700 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TTG+ +T Sbjct: 544 GETTGVDIT 552>NP_006258 Length = 3224 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSTTGLS 7 GS+TGLS Sbjct: 2843 GSSTGLS 2849>XP_005264064 Length = 2282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSTTGLS 7 GS+TGLS Sbjct: 1901 GSSTGLS 1907>XP_005264063 Length = 3136 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSTTGLS 7 GS+TGLS Sbjct: 2755 GSSTGLS 2761>XP_005264062 Length = 3232 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSTTGLS 7 GS+TGLS Sbjct: 2851 GSSTGLS 2857>XP_005264061 Length = 3232 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSTTGLS 7 GS+TGLS Sbjct: 2851 GSSTGLS 2857>XP_005264060 Length = 3250 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSTTGLS 7 GS+TGLS Sbjct: 2869 GSSTGLS 2875>XP_005264059 Length = 3258 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSTTGLS 7 GS+TGLS Sbjct: 2877 GSSTGLS 2883>NP_776255 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSTTGLSV 8 G+TTGL V Sbjct: 43 GATTGLRV 50>NP_001274745 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 975 GYNTGVSVT 983>NP_055662 Length = 1087 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 964 GYNTGVSVT 972>NP_149043 Length = 1018 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STTGLSVT 9 + TGLSVT Sbjct: 915 AVTGLSVT 922>NP_000515 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSTTGLS 7 G+TTG+S Sbjct: 23 GNTTGIS 29>NP_001073892 Length = 1140 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSTTGLSVT 9 GST GL+++ Sbjct: 153 GSTLGLTIS 161>XP_006715500 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GSTTGLSV 8 GSTTG+ + Sbjct: 237 GSTTGIQL 244>XP_006711752 Length = 1085 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 964 GYNTGVSVT 972>XP_006711751 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 624 GYNTGVSVT 632>XP_006711750 Length = 930 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 734 GYNTGVSVT 742>XP_006711749 Length = 965 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 769 GYNTGVSVT 777>XP_005245729 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 964 GYNTGVSVT 972>XP_005245727 Length = 1079 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 975 GYNTGVSVT 983>XP_005245726 Length = 1095 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 975 GYNTGVSVT 983>XP_005245725 Length = 1096 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 975 GYNTGVSVT 983>XP_005245724 Length = 1098 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 975 GYNTGVSVT 983>XP_005245715 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 975 GYNTGVSVT 983>XP_006711748 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 964 GYNTGVSVT 972>XP_006711747 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 964 GYNTGVSVT 972>XP_006711746 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 964 GYNTGVSVT 972>XP_006711745 Length = 1170 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 975 GYNTGVSVT 983>XP_006711744 Length = 1171 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 975 GYNTGVSVT 983>XP_006711743 Length = 1171 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 975 GYNTGVSVT 983>XP_006711742 Length = 1171 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSTTGLSVT 9 G TG+SVT Sbjct: 975 GYNTGVSVT 983>NP_803875 Length = 4243 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSTTGLS 7 GSTTG++ Sbjct: 1669 GSTTGMT 1675>NP_116116 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 STTGLSVT 9 ST+GLS++ Sbjct: 408 STSGLSIS 415>NP_997243 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSTTGLSV 8 G+T GLSV Sbjct: 460 GATGGLSV 467>NP_002217 Length = 1238 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSTTGLSV 8 GS+TGL V Sbjct: 1077 GSSTGLLV 1084>NP_660142 Length = 1200 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSTTGLSV 8 GS+TGL V Sbjct: 1039 GSSTGLLV 1046>NP_775871 Length = 8384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTGLSV 8 TTGLSV Sbjct: 3566 TTGLSV 3571Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTGLSV 8 TTGLSV Sbjct: 3954 TTGLSV 3959Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTGLSV 8 TTGLSV Sbjct: 5941 TTGLSV 5946>XP_005248296 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GSTTGLS 7 GST GLS Sbjct: 178 GSTQGLS 184>XP_005248295 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GSTTGLS 7 GST GLS Sbjct: 178 GSTQGLS 184>XP_005246847 Length = 1034 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TGLSVT 9 TGLSVT Sbjct: 760 TGLSVT 765>XP_006712769 Length = 1059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TGLSVT 9 TGLSVT Sbjct: 785 TGLSVT 790>XP_006712768 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TGLSVT 9 TGLSVT Sbjct: 876 TGLSVT 881>XP_006712767 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TGLSVT 9 TGLSVT Sbjct: 876 TGLSVT 881>XP_006712766 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TGLSVT 9 TGLSVT Sbjct: 905 TGLSVT 910>XP_005246846 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TGLSVT 9 TGLSVT Sbjct: 985 TGLSVT 990>NP_005061 Length = 1232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TGLSVT 9 TGLSVT Sbjct: 958 TGLSVT 963>NP_001129705 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GSTTGLS 7 GST GLS Sbjct: 691 GSTLGLS 697>NP_055857 Length = 1411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSTTGLSVT 9 GS++GL+ T Sbjct: 682 GSSSGLTAT 690>NP_009208 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GSTTGLS 7 GST GLS Sbjct: 178 GSTQGLS 184>NP_963868 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TGLSVT 9 TGLSVT Sbjct: 985 TGLSVT 990Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.296 0.115 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 465,132 Number of extensions: 846 Number of successful extensions: 60 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |