Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 20 390 NP_000247 17 2528 XP_006718301 17 2528 NP_002413 17 3301 NP_001254542 17 3301 NP_001254539 17 3301 NP_001254543 17 3301 NP_722561 17 3301 NP_001254538 17 3301 NP_001254540 17 3301 NP_001254541 17 3301 XP_006711316 17 3301 XP_005245114 17 3301 XP_005245113 17 3301 XP_006711315 17 3301 XP_005245112 17 3301 XP_006711314 17 3301 NP_002416 16 5631 NP_060896 16 5631 XP_005249274 16 5631 XP_005249273 16 5631 XP_005249272 16 5631 XP_005249271 16 5631 XP_006715198 16 5631 XP_005249269 16 5631 XP_005249270 16 5631 XP_005249268 16 5631 NP_001866 16 7355 NP_004332 16 7355 NP_001116105 16 7355 NP_001116106 16 7355 NP_060233 16 7355 NP_057278 16 7355 NP_659405 16 7355 NP_006569 16 7355 NP_006112 16 7355 NP_001026915 16 7355 NP_071903 16 7355 NP_002556 16 7355 XP_005262045 16 7355 XP_005249616 16 7355 XP_005249615 16 7355 XP_005249613 16 7355 XP_005249612 16 7355 XP_005264615 16 7355 XP_006712164 16 7355 XP_005264614 16 7355 XP_005264613 16 7355 XP_005264612 16 7355 NP_071902 15 9605 NP_001001740 15 9605 NP_001273573 15 9605 NP_001128360 15 9605 NP_001735 15 9605 NP_612640 15 9605 XP_005262209 15 9605 XP_006724727 15 9605 XP_006711552 15 9605 XP_006711551 15 9605 XP_006711550 15 9605 XP_005245505 15 9605 XP_005245504 15 9605>NP_004251 Length = 1208 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GSSSVEFDI 9 GSSSVEFD+ Sbjct: 981 GSSSVEFDM 989>NP_000247 Length = 1274 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSSVEFDI 9 GSS V+FD+ Sbjct: 84 GSSKVKFDL 92>XP_006718301 Length = 1268 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSSVEFDI 9 GSS V+FD+ Sbjct: 84 GSSKVKFDL 92>NP_002413 Length = 477 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 GSS +EFD Sbjct: 452 GSSQLEFD 459>NP_001254542 Length = 451 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 G SSVEFD Sbjct: 87 GWSSVEFD 94>NP_001254539 Length = 529 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 G SSVEFD Sbjct: 165 GWSSVEFD 172>NP_001254543 Length = 415 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 G SSVEFD Sbjct: 51 GWSSVEFD 58>NP_722561 Length = 529 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 G SSVEFD Sbjct: 165 GWSSVEFD 172>NP_001254538 Length = 549 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 G SSVEFD Sbjct: 185 GWSSVEFD 192>NP_001254540 Length = 546 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 G SSVEFD Sbjct: 182 GWSSVEFD 189>NP_001254541 Length = 397 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 G SSVEFD Sbjct: 33 GWSSVEFD 40>XP_006711316 Length = 529 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 G SSVEFD Sbjct: 165 GWSSVEFD 172>XP_005245114 Length = 529 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 G SSVEFD Sbjct: 165 GWSSVEFD 172>XP_005245113 Length = 529 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 G SSVEFD Sbjct: 165 GWSSVEFD 172>XP_006711315 Length = 529 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 G SSVEFD Sbjct: 165 GWSSVEFD 172>XP_005245112 Length = 549 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 G SSVEFD Sbjct: 185 GWSSVEFD 192>XP_006711314 Length = 552 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GSSSVEFD 8 G SSVEFD Sbjct: 188 GWSSVEFD 195>NP_002416 Length = 476 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GSSSVEFD 8 GSS EFD Sbjct: 451 GSSQFEFD 458>NP_060896 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSSVEFD 8 SSSV+FD Sbjct: 113 SSSVDFD 119>XP_005249274 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSSVEFD 8 SSSV+FD Sbjct: 113 SSSVDFD 119>XP_005249273 Length = 814 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSSVEFD 8 SSSV+FD Sbjct: 122 SSSVDFD 128>XP_005249272 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSSVEFD 8 SSSV+FD Sbjct: 100 SSSVDFD 106>XP_005249271 Length = 828 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSSVEFD 8 SSSV+FD Sbjct: 109 SSSVDFD 115>XP_006715198 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSSVEFD 8 SSSV+FD Sbjct: 113 SSSVDFD 119>XP_005249269 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSSVEFD 8 SSSV+FD Sbjct: 113 SSSVDFD 119>XP_005249270 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSSVEFD 8 SSSV+FD Sbjct: 113 SSSVDFD 119>XP_005249268 Length = 841 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSSVEFD 8 SSSV+FD Sbjct: 122 SSSVDFD 128>NP_001866 Length = 1500 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SSVEFD Sbjct: 988 SSVEFD 993>NP_004332 Length = 2225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SSVEFD Sbjct: 947 SSVEFD 952>NP_001116105 Length = 1506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SSVEFD Sbjct: 994 SSVEFD 999>NP_001116106 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SSVEFD Sbjct: 537 SSVEFD 542>NP_060233 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSSVEFDI 9 G+S+V FDI Sbjct: 133 GASAVLFDI 141>NP_057278 Length = 395 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSSSVEFDI 9 G+SSV+F + Sbjct: 327 GASSVDFSL 335>NP_659405 Length = 192 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GSSSVEFDI 9 G+S V++D+ Sbjct: 67 GTSQVQYDV 75>NP_006569 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSSSVEFDI 9 G+SSV+F + Sbjct: 285 GASSVDFSL 293>NP_006112 Length = 644 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSSSVEF 7 GSSSV+F Sbjct: 628 GSSSVKF 634>NP_001026915 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GSSSVEFDI 9 G+S V++D+ Sbjct: 67 GTSQVQYDV 75>NP_071903 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SSSVEFDI 9 SSSVE++I Sbjct: 255 SSSVEYNI 262>NP_002556 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GSSSVEFD 8 GSS VE D Sbjct: 19 GSSEVELD 26>XP_005262045 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GSSSVEFDI 9 G+S V++D+ Sbjct: 67 GTSQVQYDV 75>XP_005249616 Length = 284 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SSSVEFDI 9 SSSVE++I Sbjct: 103 SSSVEYNI 110>XP_005249615 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SSSVEFDI 9 SSSVE++I Sbjct: 255 SSSVEYNI 262>XP_005249613 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SSSVEFDI 9 SSSVE++I Sbjct: 103 SSSVEYNI 110>XP_005249612 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SSSVEFDI 9 SSSVE++I Sbjct: 255 SSSVEYNI 262>XP_005264615 Length = 2162 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SSVEFD Sbjct: 884 SSVEFD 889>XP_006712164 Length = 2179 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SSVEFD Sbjct: 884 SSVEFD 889>XP_005264614 Length = 2191 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SSVEFD Sbjct: 947 SSVEFD 952>XP_005264613 Length = 2208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SSVEFD Sbjct: 947 SSVEFD 952>XP_005264612 Length = 2242 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SSVEFD Sbjct: 947 SSVEFD 952>NP_071902 Length = 731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SS+EFD Sbjct: 425 SSIEFD 430>NP_001001740 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SS+EFD Sbjct: 401 SSIEFD 406>NP_001273573 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SS+EFD Sbjct: 185 SSIEFD 190>NP_001128360 Length = 1358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SVEFDI 9 S+EFDI Sbjct: 489 SIEFDI 494>NP_001735 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSSSVEFDI 9 GSS+V F++ Sbjct: 455 GSSAVGFEV 463>NP_612640 Length = 115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSSVEFDI 9 +SSV++DI Sbjct: 91 ASSVQYDI 98>XP_005262209 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSSVEFDI 9 +SSVE+D+ Sbjct: 228 TSSVEYDM 235>XP_006724727 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSSVEFDI 9 +SSVE+D+ Sbjct: 314 TSSVEYDM 321>XP_006711552 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SS+EFD Sbjct: 114 SSIEFD 119>XP_006711551 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SS+EFD Sbjct: 425 SSIEFD 430>XP_006711550 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SS+EFD Sbjct: 402 SSIEFD 407>XP_005245505 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SS+EFD Sbjct: 405 SSIEFD 410>XP_005245504 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SSVEFD 8 SS+EFD Sbjct: 421 SSIEFD 426Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.128 0.323 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 458,925 Number of extensions: 647 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |