Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 390 XP_006716142 20 390 XP_005250088 20 390 XP_006716141 20 390 XP_005250085 20 390 XP_006716140 20 390 XP_005250084 20 390 XP_005250083 20 390 XP_005250082 20 390 NP_003893 17 2528 XP_006711085 17 2528 XP_006711084 17 2528 XP_005271366 17 2528 NP_596870 17 3301 NP_803875 17 4312 NP_056384 16 5631 NP_001129599 16 5631 NP_001245377 16 5631 NP_055201 16 5631 NP_659441 16 5631 NP_443132 16 5631 NP_937757 16 5631 NP_937756 16 5631 XP_006725181 16 5631 XP_006725180 16 5631 XP_005256247 16 5631 XP_006716362 16 5631 XP_006716361 16 5631 XP_005272017 16 5631 XP_006714649 16 5631 XP_005245139 16 5631 XP_005245138 16 5631 XP_005245137 16 5631 XP_005245136 16 5631 NP_113664 16 5631 XP_006719740 16 7355 XP_005271103 16 7355 XP_006710839 16 7355 XP_005271102 16 7355 XP_006710838 16 7355 NP_003981 15 9605 NP_003980 15 9605 NP_001347 15 9605 NP_001180346 15 9605 NP_001180345 15 9605 NP_001129496 15 9605 NP_938011 15 9605 NP_060619 15 9605 NP_056106 15 9605 NP_001274740 15 9605 NP_001009811 15 9605 NP_055799 15 9605 NP_001128661 15 9605 NP_009019 15 9605 NP_001038942 15 9605 NP_055380 15 9605 XP_005274596 15 9605 XP_005257233 15 9605 XP_005257231 15 9605 XP_006712544 15 9605 XP_006712543 15 9605 XP_005246573 15 9605 XP_006712542 15 9605 XP_006712541 15 9605 NP_001731 15 9605 NP_001128660 15 9605 NP_001128659 15 9605 NP_004495 15 9605>NP_733751 Length = 4911 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQSDSFGT 9 SQSDSFGT Sbjct: 2308 SQSDSFGT 2315>XP_006716142 Length = 4927 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQSDSFGT 9 SQSDSFGT Sbjct: 2325 SQSDSFGT 2332>XP_005250088 Length = 4928 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQSDSFGT 9 SQSDSFGT Sbjct: 2325 SQSDSFGT 2332>XP_006716141 Length = 4959 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQSDSFGT 9 SQSDSFGT Sbjct: 2325 SQSDSFGT 2332>XP_005250085 Length = 4979 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQSDSFGT 9 SQSDSFGT Sbjct: 2325 SQSDSFGT 2332>XP_006716140 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQSDSFGT 9 SQSDSFGT Sbjct: 2325 SQSDSFGT 2332>XP_005250084 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQSDSFGT 9 SQSDSFGT Sbjct: 2325 SQSDSFGT 2332>XP_005250083 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQSDSFGT 9 SQSDSFGT Sbjct: 2324 SQSDSFGT 2331>XP_005250082 Length = 4983 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQSDSFGT 9 SQSDSFGT Sbjct: 2325 SQSDSFGT 2332>NP_003893 Length = 644 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QSDSFGT 9 Q+DSFGT Sbjct: 81 QNDSFGT 87>XP_006711085 Length = 643 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QSDSFGT 9 Q+DSFGT Sbjct: 81 QNDSFGT 87>XP_006711084 Length = 664 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QSDSFGT 9 Q+DSFGT Sbjct: 102 QNDSFGT 108>XP_005271366 Length = 665 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QSDSFGT 9 Q+DSFGT Sbjct: 102 QNDSFGT 108>NP_596870 Length = 5604 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QSDSFGT 9 +SDSFGT Sbjct: 5163 RSDSFGT 5169>NP_803875 Length = 4243 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SDSFGT 9 SDSFGT Sbjct: 2865 SDSFGT 2870>NP_056384 Length = 863 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SQSDSFG 8 S SDSFG Sbjct: 817 SSSDSFG 823>NP_001129599 Length = 859 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SQSDSFG 8 S SDSFG Sbjct: 813 SSSDSFG 819>NP_001245377 Length = 602 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GSQSDSFGT 9 GSQ D F T Sbjct: 408 GSQVDDFST 416>NP_055201 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GSQSDSFGT 9 GSQ D F T Sbjct: 430 GSQVDDFST 438>NP_659441 Length = 787 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SQSDSFG 8 SQSD FG Sbjct: 523 SQSDRFG 529>NP_443132 Length = 3538 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GSQSDSFG 8 GSQ+++FG Sbjct: 3192 GSQNNTFG 3199>NP_937757 Length = 3667 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GSQSDSFG 8 GSQ+++FG Sbjct: 3321 GSQNNTFG 3328>NP_937756 Length = 3707 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GSQSDSFG 8 GSQ+++FG Sbjct: 3361 GSQNNTFG 3368>XP_006725181 Length = 681 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SQSDSFG 8 SQSD FG Sbjct: 417 SQSDRFG 423>XP_006725180 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SQSDSFG 8 SQSD FG Sbjct: 523 SQSDRFG 529>XP_005256247 Length = 497 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSQSDSFGT 9 G QS+S GT Sbjct: 475 GVQSESLGT 483>XP_006716362 Length = 681 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SQSDSFG 8 SQSD FG Sbjct: 417 SQSDRFG 423>XP_006716361 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SQSDSFG 8 SQSD FG Sbjct: 523 SQSDRFG 529>XP_005272017 Length = 624 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GSQSDSFGT 9 GSQ D F T Sbjct: 430 GSQVDDFST 438>XP_006714649 Length = 502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GSQSDSFGT 9 GSQ D F T Sbjct: 308 GSQVDDFST 316>XP_005245139 Length = 763 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SQSDSFG 8 S SDSFG Sbjct: 717 SSSDSFG 723>XP_005245138 Length = 862 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SQSDSFG 8 S SDSFG Sbjct: 827 SSSDSFG 833>XP_005245137 Length = 869 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SQSDSFG 8 S SDSFG Sbjct: 823 SSSDSFG 829>XP_005245136 Length = 873 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SQSDSFG 8 S SDSFG Sbjct: 827 SSSDSFG 833>NP_113664 Length = 497 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSQSDSFGT 9 G QS+S GT Sbjct: 475 GVQSESLGT 483>XP_006719740 Length = 1863 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GSQSDS 6 GSQSDS Sbjct: 94 GSQSDS 99>XP_005271103 Length = 164 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GSQSDSFG 8 G+QS+ FG Sbjct: 157 GTQSERFG 164>XP_006710839 Length = 164 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GSQSDSFG 8 G+QS+ FG Sbjct: 157 GTQSERFG 164>XP_005271102 Length = 164 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GSQSDSFG 8 G+QS+ FG Sbjct: 157 GTQSERFG 164>XP_006710838 Length = 164 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GSQSDSFG 8 G+QS+ FG Sbjct: 157 GTQSERFG 164>NP_003981 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QSDSFG 8 Q+DSFG Sbjct: 420 QADSFG 425>NP_003980 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QSDSFG 8 Q+DSFG Sbjct: 397 QADSFG 402>NP_001347 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSQSDSFG 8 GS+SDS G Sbjct: 73 GSRSDSRG 80>NP_001180346 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSQSDSFG 8 GS+SDS G Sbjct: 57 GSRSDSRG 64>NP_001180345 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSQSDSFG 8 GS+SDS G Sbjct: 73 GSRSDSRG 80>NP_001129496 Length = 1474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SQSDSFGT 9 S SD+FG+ Sbjct: 421 SNSDTFGS 428>NP_938011 Length = 1630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SQSDSFGT 9 S SD+FG+ Sbjct: 577 SNSDTFGS 584>NP_060619 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GSQSDSFGT 9 G +DS GT Sbjct: 700 GQSTDSLGT 708>NP_056106 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GSQSDSF 7 GS+SD F Sbjct: 470 GSESDKF 476>NP_001274740 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GSQSDSF 7 GS+SD F Sbjct: 158 GSESDKF 164>NP_001009811 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GSQSDSFG 8 GS+S FG Sbjct: 220 GSESSGFG 227>NP_055799 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GSQSDSFG 8 GS+S FG Sbjct: 220 GSESSGFG 227>NP_001128661 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 GSQSDSFGT 9 G Q FGT Sbjct: 303 GDQGSGFGT 311>NP_009019 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SQSDSFG 8 S+SD+FG Sbjct: 59 SKSDNFG 65>NP_001038942 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSQSDSFGT 9 G+ SD+ GT Sbjct: 481 GAPSDALGT 489>NP_055380 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSQSDSFG 8 GS+S SFG Sbjct: 88 GSKSISFG 95>XP_005274596 Length = 1651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SQSDSFGT 9 S SD+FG+ Sbjct: 598 SNSDTFGS 605>XP_005257233 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GSQSDSFG 8 GS+S FG Sbjct: 220 GSESSGFG 227>XP_005257231 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GSQSDSFG 8 GS+S FG Sbjct: 220 GSESSGFG 227>XP_006712544 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 GSQSDSFGT 9 G Q FGT Sbjct: 150 GDQGSGFGT 158>XP_006712543 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 GSQSDSFGT 9 G Q FGT Sbjct: 343 GDQGSGFGT 351>XP_005246573 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 GSQSDSFGT 9 G Q FGT Sbjct: 367 GDQGSGFGT 375>XP_006712542 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 GSQSDSFGT 9 G Q FGT Sbjct: 367 GDQGSGFGT 375>XP_006712541 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 GSQSDSFGT 9 G Q FGT Sbjct: 367 GDQGSGFGT 375>NP_001731 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SQSDSFG 8 S+SD+FG Sbjct: 59 SKSDNFG 65>NP_001128660 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 GSQSDSFGT 9 G Q FGT Sbjct: 343 GDQGSGFGT 351>NP_001128659 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 GSQSDSFGT 9 G Q FGT Sbjct: 367 GDQGSGFGT 375>NP_004495 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 GSQSDSFGT 9 G Q FGT Sbjct: 343 GDQGSGFGT 351Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.118 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 564,099 Number of extensions: 925 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |