Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001155973                                                           19     869
NP_001124199                                                           19     869
NP_001020014                                                           19     869
NP_055903                                                              19     869
NP_659485                                                              19     869
NP_001245275                                                           19     869
NP_001245274                                                           19     869
XP_006714018                                                           19     869
XP_006714017                                                           19     869
XP_006714016                                                           19     869
XP_006714015                                                           19     869
XP_006714014                                                           19     869
XP_006714013                                                           19     869
XP_006714012                                                           19     869
XP_006714011                                                           19     869
XP_006714010                                                           19     869
XP_006714009                                                           19     869
XP_006714008                                                           19     869
XP_006714007                                                           19     869
XP_006714006                                                           19     869
XP_006714005                                                           19     869
XP_006714004                                                           19     869
XP_006714003                                                           19     869
XP_006714002                                                           19     869
NP_055309                                                              18    1935
XP_005255314                                                           18    1935
XP_006721102                                                           18    1935
XP_005255313                                                           18    1935
XP_005255312                                                           18    1935
XP_006721101                                                           18    1935
XP_005255311                                                           18    1935
XP_005255310                                                           18    1935
NP_055330                                                              17    2528
NP_001186231                                                           17    2528
NP_001186232                                                           17    2528
XP_006719496                                                           17    2528
XP_006719495                                                           17    2528
XP_006719494                                                           17    2528
XP_006719493                                                           17    2528
XP_006719492                                                           17    2528
NP_001783                                                              17    4312
NP_001239268" target = "next">NP_001239268                                                           17    4312
NP_001239267" target = "next">NP_001239267                                                           17    4312
NP_001785                                                              17    4312
NP_004733                                                              17    4312
NP_001028229                                                           17    4312
NP_056335                                                              17    4312
NP_055851                                                              17    4312
XP_005258239                                                           17    4312
XP_005258238                                                           17    4312
XP_005265631                                                           17    4312
XP_006713477                                                           17    4312
XP_006713476                                                           17    4312
XP_005265628                                                           17    4312
XP_005265627                                                           17    4312
XP_006713475                                                           17    4312
XP_006713474                                                           17    4312
XP_005265625                                                           17    4312
XP_006713473                                                           17    4312
XP_005265623                                                           17    4312
XP_005265622                                                           17    4312
XP_005265621                                                           17    4312
XP_005265620                                                           17    4312
XP_006713472                                                           17    4312
XP_006713471                                                           17    4312
XP_006713470                                                           17    4312
NP_001101                                                              16    5631
XP_005254174                                                           16    5631
NP_001265438                                                           16    5631
NP_001265437                                                           16    5631
NP_037388                                                              16    5631
NP_001275688                                                           16    5631
NP_001193583                                                           16    7355
NP_006303                                                              16    7355
NP_001070729                                                           16    7355
NP_057524                                                              16    7355
NP_001186127                                                           16    7355
NP_060779                                                              16    7355
NP_001091996                                                           16    7355
NP_694938                                                              16    7355
NP_001273500                                                           16    7355
NP_001273499                                                           16    7355
XP_005259031                                                           16    7355
XP_006723300                                                           16    7355
XP_005259028                                                           16    7355
XP_005271464                                                           16    7355
XP_005271463                                                           16    7355
XP_005265665                                                           16    7355
XP_005265664                                                           16    7355
XP_005265663                                                           16    7355
XP_006713485                                                           16    7355
XP_005265662                                                           16    7355
NP_001239                                                              16    7355
NP_808880                                                              15    9605
NP_060720                                                              15    9605
NP_005376                                                              15    9605
NP_001166033                                                           15    9605
NP_849193                                                              15    9605
XP_005250856                                                           15    9605
XP_005273625                                                           15    9605
XP_006716420                                                           15    9605
XP_006716419                                                           15    9605
XP_005265233                                                           15    9605
XP_005265231                                                           15    9605
XP_006713237                                                           15    9605
XP_006713236                                                           15    9605
XP_006713235                                                           15    9605
XP_006713234                                                           15    9605
XP_005265230                                                           15    9605
XP_006713080                                                           15    9605
NP_001138631                                                           15    9605
>NP_001155973
          Length = 1833

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    GSKSSLNTS 9
            GS SSLNTS
Sbjct: 1528 GSNSSLNTS 1536
>NP_001124199
          Length = 123

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>NP_001020014
          Length = 1029

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   GSKSSLNTS 9
           GS SSLNTS
Sbjct: 724 GSNSSLNTS 732
>NP_055903
          Length = 1723

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    GSKSSLNTS 9
            GS SSLNTS
Sbjct: 1418 GSNSSLNTS 1426
>NP_659485
          Length = 221

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>NP_001245275
          Length = 200

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>NP_001245274
          Length = 248

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714018
          Length = 150

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714017
          Length = 150

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714016
          Length = 150

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714015
          Length = 195

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714014
          Length = 221

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714013
          Length = 242

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 59 GSKSSLSTS 67
>XP_006714012
          Length = 248

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714011
          Length = 248

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714010
          Length = 248

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714009
          Length = 248

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714008
          Length = 248

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714007
          Length = 248

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714006
          Length = 248

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714005
          Length = 248

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714004
          Length = 248

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714003
          Length = 248

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 38 GSKSSLSTS 46
>XP_006714002
          Length = 269

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  GSKSSLNTS 9
          GSKSSL+TS
Sbjct: 59 GSKSSLSTS 67
>NP_055309
          Length = 1962

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1    GSKSSLNTS 9
            GS SSLNT+
Sbjct: 1658 GSSSSLNTT 1666
>XP_005255314
          Length = 1709

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1    GSKSSLNTS 9
            GS SSLNT+
Sbjct: 1405 GSSSSLNTT 1413
>XP_006721102
          Length = 1820

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1    GSKSSLNTS 9
            GS SSLNT+
Sbjct: 1516 GSSSSLNTT 1524
>XP_005255313
          Length = 1822

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1    GSKSSLNTS 9
            GS SSLNT+
Sbjct: 1518 GSSSSLNTT 1526
>XP_005255312
          Length = 1871

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1    GSKSSLNTS 9
            GS SSLNT+
Sbjct: 1567 GSSSSLNTT 1575
>XP_006721101
          Length = 1907

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1    GSKSSLNTS 9
            GS SSLNT+
Sbjct: 1603 GSSSSLNTT 1611
>XP_005255311
          Length = 1913

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1    GSKSSLNTS 9
            GS SSLNT+
Sbjct: 1609 GSSSSLNTT 1617
>XP_005255310
          Length = 1919

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1    GSKSSLNTS 9
            GS SSLNT+
Sbjct: 1615 GSSSSLNTT 1623
>NP_055330
          Length = 540

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   SKSSLNTS 9
           SKS+LNTS
Sbjct: 298 SKSNLNTS 305
>NP_001186231
          Length = 540

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   SKSSLNTS 9
           SKS+LNTS
Sbjct: 298 SKSNLNTS 305
>NP_001186232
          Length = 540

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   SKSSLNTS 9
           SKS+LNTS
Sbjct: 298 SKSNLNTS 305
>XP_006719496
          Length = 403

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   SKSSLNTS 9
           SKS+LNTS
Sbjct: 161 SKSNLNTS 168
>XP_006719495
          Length = 479

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   SKSSLNTS 9
           SKS+LNTS
Sbjct: 237 SKSNLNTS 244
>XP_006719494
          Length = 531

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   SKSSLNTS 9
           SKS+LNTS
Sbjct: 289 SKSNLNTS 296
>XP_006719493
          Length = 531

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   SKSSLNTS 9
           SKS+LNTS
Sbjct: 289 SKSNLNTS 296
>XP_006719492
          Length = 531

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   SKSSLNTS 9
           SKS+LNTS
Sbjct: 289 SKSNLNTS 296
>NP_001783
          Length = 906

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   GSKSSLNTS 9
           GS SSLN+S
Sbjct: 868 GSLSSLNSS 876
>NP_001239268" target = "next">NP_001239268
          Length = 842

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   GSKSSLNTS 9
           GS SSLN+S
Sbjct: 804 GSVSSLNSS 812
>NP_001239267" target = "next">NP_001239267
          Length = 879

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   GSKSSLNTS 9
           GS SSLN+S
Sbjct: 841 GSVSSLNSS 849
>NP_001785
          Length = 916

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   GSKSSLNTS 9
           GS SSLN+S
Sbjct: 878 GSVSSLNSS 886
>NP_004733
          Length = 1256

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 961 GSQNSLNT 968
>NP_001028229
          Length = 1462

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 933 GSQNSLNT 940
>NP_056335
          Length = 1287

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 961 GSQNSLNT 968
>NP_055851
          Length = 500

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GSKSSLNT 8
           GSK +LNT
Sbjct: 125 GSKQALNT 132
>XP_005258239
          Length = 875

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   GSKSSLNTS 9
           GS SSLN+S
Sbjct: 837 GSLSSLNSS 845
>XP_005258238
          Length = 888

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   GSKSSLNTS 9
           GS SSLN+S
Sbjct: 850 GSLSSLNSS 858
>XP_005265631
          Length = 1288

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 961 GSQNSLNT 968
>XP_006713477
          Length = 1290

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 963 GSQNSLNT 970
>XP_006713476
          Length = 1375

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 845 GSQNSLNT 852
>XP_005265628
          Length = 1395

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 933 GSQNSLNT 940
>XP_005265627
          Length = 1425

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 963 GSQNSLNT 970
>XP_006713475
          Length = 1463

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 933 GSQNSLNT 940
>XP_006713474
          Length = 1465

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 935 GSQNSLNT 942
>XP_005265625
          Length = 1478

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 949 GSQNSLNT 956
>XP_006713473
          Length = 1479

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 949 GSQNSLNT 956
>XP_005265623
          Length = 1479

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 961 GSQNSLNT 968
>XP_005265622
          Length = 1481

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 963 GSQNSLNT 970
>XP_005265621
          Length = 1491

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 961 GSQNSLNT 968
>XP_005265620
          Length = 1492

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 963 GSQNSLNT 970
>XP_006713472
          Length = 1492

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 962 GSQNSLNT 969
>XP_006713471
          Length = 1492

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 962 GSQNSLNT 969
>XP_006713470
          Length = 1493

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS++SLNT
Sbjct: 963 GSQNSLNT 970
>NP_001101
          Length = 748

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   GSKSSLNT 8
           G K SLNT
Sbjct: 353 GKKKSLNT 360
>XP_005254174
          Length = 717

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   GSKSSLNT 8
           G K SLNT
Sbjct: 322 GKKKSLNT 329
>NP_001265438
          Length = 665

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   GSKSSLNTS 9
           G KS LN+S
Sbjct: 169 GEKSGLNSS 177
>NP_001265437
          Length = 667

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   GSKSSLNTS 9
           G KS LN+S
Sbjct: 171 GEKSGLNSS 179
>NP_037388
          Length = 692

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   GSKSSLNTS 9
           G KS LN+S
Sbjct: 196 GEKSGLNSS 204
>NP_001275688
          Length = 691

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   GSKSSLNTS 9
           G KS LN+S
Sbjct: 195 GEKSGLNSS 203
>NP_001193583
          Length = 2504

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    GSKSSLNTS 9
            GSKS  NTS
Sbjct: 2245 GSKSPGNTS 2253
>NP_006303
          Length = 2514

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    GSKSSLNTS 9
            GSKS  NTS
Sbjct: 2255 GSKSPGNTS 2263
>NP_001070729
          Length = 2458

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    GSKSSLNTS 9
            GSKS  NTS
Sbjct: 2245 GSKSPGNTS 2253
>NP_057524
          Length = 474

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  GSKSSLNTS 9
          GSK  LN+S
Sbjct: 47 GSKRGLNSS 55
>NP_001186127
          Length = 699

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS+SS+N+
Sbjct: 462 GSRSSINS 469
>NP_060779
          Length = 684

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   GSKSSLNT 8
           GS+SS+N+
Sbjct: 462 GSRSSINS 469
>NP_001091996
          Length = 394

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   GSKSSLNTS 9
           G+KSS+N++
Sbjct: 301 GNKSSVNST 309
>NP_694938
          Length = 384

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   GSKSSLNTS 9
           G+KSS+N++
Sbjct: 291 GNKSSVNST 299
>NP_001273500
          Length = 355

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   GSKSSLNTS 9
           G+KSS+N++
Sbjct: 262 GNKSSVNST 270
>NP_001273499
          Length = 355

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   GSKSSLNTS 9
           G+KSS+N++
Sbjct: 262 GNKSSVNST 270
>XP_005259031
          Length = 412

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  GSKSSLNTS 9
          GSK  LN+S
Sbjct: 47 GSKRGLNSS 55
>XP_006723300
          Length = 474

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  GSKSSLNTS 9
          GSK  LN+S
Sbjct: 47 GSKRGLNSS 55
>XP_005259028
          Length = 474

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  GSKSSLNTS 9
          GSK  LN+S
Sbjct: 47 GSKRGLNSS 55
>XP_005271464
          Length = 384

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   GSKSSLNTS 9
           G+KSS+N++
Sbjct: 291 GNKSSVNST 299
>XP_005271463
          Length = 394

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   GSKSSLNTS 9
           G+KSS+N++
Sbjct: 301 GNKSSVNST 309
>XP_005265665
          Length = 402

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GSKSSLNTS 9
           G K  LNTS
Sbjct: 232 GEKMDLNTS 240
>XP_005265664
          Length = 407

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GSKSSLNTS 9
           G K  LNTS
Sbjct: 232 GEKMDLNTS 240
>XP_005265663
          Length = 415

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GSKSSLNTS 9
           G K  LNTS
Sbjct: 232 GEKMDLNTS 240
>XP_006713485
          Length = 452

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GSKSSLNTS 9
           G K  LNTS
Sbjct: 232 GEKMDLNTS 240
>XP_005265662
          Length = 529

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GSKSSLNTS 9
           G K  LNTS
Sbjct: 232 GEKMDLNTS 240
>NP_001239
          Length = 529

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GSKSSLNTS 9
           G K  LNTS
Sbjct: 232 GEKMDLNTS 240
>NP_808880
          Length = 207

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2  SKSSLNTS 9
          SKSS NTS
Sbjct: 85 SKSSGNTS 92
>NP_060720
          Length = 658

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   KSSLNT 8
           KSSLNT
Sbjct: 414 KSSLNT 419
>NP_005376
          Length = 1462

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SKSSLNTS 9
           +KSS NTS
Sbjct: 933 TKSSTNTS 940
>NP_001166033
          Length = 634

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   KSSLNT 8
           KSSLNT
Sbjct: 390 KSSLNT 395
>NP_849193
          Length = 826

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  KSSLNTS 9
          KSSLN+S
Sbjct: 12 KSSLNSS 18
>XP_005250856
          Length = 263

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   SKSSLNTS 9
           SKSS NTS
Sbjct: 173 SKSSGNTS 180
>XP_005273625
          Length = 427

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   KSSLNT 8
           KSSLNT
Sbjct: 414 KSSLNT 419
>XP_006716420
          Length = 646

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   KSSLNT 8
           KSSLNT
Sbjct: 414 KSSLNT 419
>XP_006716419
          Length = 676

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   KSSLNT 8
           KSSLNT
Sbjct: 414 KSSLNT 419
>XP_005265233
          Length = 1163

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SKSSLNTS 9
           +KSS NTS
Sbjct: 633 TKSSTNTS 640
>XP_005265231
          Length = 1210

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SKSSLNTS 9
           +KSS NTS
Sbjct: 680 TKSSTNTS 687
>XP_006713237
          Length = 1353

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SKSSLNTS 9
           +KSS NTS
Sbjct: 823 TKSSTNTS 830
>XP_006713236
          Length = 1353

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SKSSLNTS 9
           +KSS NTS
Sbjct: 823 TKSSTNTS 830
>XP_006713235
          Length = 1353

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SKSSLNTS 9
           +KSS NTS
Sbjct: 823 TKSSTNTS 830
>XP_006713234
          Length = 1436

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SKSSLNTS 9
           +KSS NTS
Sbjct: 933 TKSSTNTS 940
>XP_005265230
          Length = 1463

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SKSSLNTS 9
           +KSS NTS
Sbjct: 933 TKSSTNTS 940
>XP_006713080
          Length = 804

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  KSSLNTS 9
          KSSLN+S
Sbjct: 12 KSSLNSS 18
>NP_001138631
          Length = 637

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   KSSLNT 8
           KSSLNT
Sbjct: 393 KSSLNT 398
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.274   0.0942    0.211 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 379,261
Number of extensions: 879
Number of successful extensions: 111
Number of sequences better than 10000.0: 111
Number of HSP's gapped: 111
Number of HSP's successfully gapped: 111
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 18 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (14.5 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package