Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 19 665 NP_001091680 19 665 NP_001091679 19 665 XP_006713048 19 665 XP_006713047 19 665 XP_006713046 19 665 XP_005264943 19 665 NP_003214 18 1935 NP_001257569 17 4312 NP_612207 17 4312 NP_001257615 17 4312 NP_001017930 17 4312 NP_001257568 17 4312 XP_005261936 17 4312 XP_005261935 17 4312 XP_005261934 17 4312 XP_005261933 17 4312 NP_055691 17 4312 NP_001269155 16 5631 NP_001269156 16 5631 NP_001269154 16 5631 NP_001269157 16 5631 NP_002706 16 5631 NP_004658 16 5631 NP_001009552 16 5631 XP_006720790 16 5631 XP_005268334 16 5631 XP_005268333 16 5631 XP_006720789 16 5631 NP_055444 16 7355 NP_653271 16 7355 XP_006725174 16 7355 XP_006725173 16 7355 XP_006725172 16 7355 XP_006725171 16 7355 XP_006725170 16 7355 XP_006725169 16 7355 XP_006725168 16 7355 XP_006725167 16 7355 XP_005266099 16 7355 XP_006716304 16 7355 XP_006716303 16 7355 XP_006716302 16 7355 XP_005266098 16 7355 XP_005266097 16 7355 XP_005266096 16 7355 XP_006716301 16 7355 NP_115560 15 9605 NP_001180246 15 9605 NP_001180244 15 9605 NP_001180245 15 9605 NP_996806 15 9605 NP_071350 15 9605 NP_001180243 15 9605 NP_001252541 15 9605 NP_057368 15 9605 NP_996882 15 9605 NP_777603 15 9605 NP_001167449 15 9605 XP_005260183 15 9605 XP_006716489 15 9605 XP_006716487 15 9605 XP_006716486 15 9605 XP_006716485 15 9605 XP_005251226 15 9605 XP_005249963 15 9605 XP_005271313 15 9605 XP_006711009 15 9605 XP_005271309 15 9605 XP_006711008 15 9605 NP_878901 15 9605 NP_878902 15 9605 NP_004895 15 9605 NP_149014 15 9605>NP_001895 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSHDINVVT 9 GS DINVVT Sbjct: 410 GSDDINVVT 418>NP_001091680 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSHDINVVT 9 GS DINVVT Sbjct: 410 GSDDINVVT 418>NP_001091679 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSHDINVVT 9 GS DINVVT Sbjct: 410 GSDDINVVT 418>XP_006713048 Length = 720 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSHDINVVT 9 GS DINVVT Sbjct: 410 GSDDINVVT 418>XP_006713047 Length = 774 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSHDINVVT 9 GS DINVVT Sbjct: 403 GSDDINVVT 411>XP_006713046 Length = 774 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSHDINVVT 9 GS DINVVT Sbjct: 403 GSDDINVVT 411>XP_005264943 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSHDINVVT 9 GS DINVVT Sbjct: 410 GSDDINVVT 418>NP_003214 Length = 338 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SHDINVVT 9 SH INVVT Sbjct: 245 SHHINVVT 252>NP_001257569 Length = 188 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GSHDINVV 8 G++D+NV+ Sbjct: 66 GNYDVNVI 73>NP_612207 Length = 188 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GSHDINVV 8 G++D+NV+ Sbjct: 66 GNYDVNVI 73>NP_001257615 Length = 188 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GSHDINVV 8 G++D+NV+ Sbjct: 66 GNYDVNVI 73>NP_001017930 Length = 600 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HDINV+ Sbjct: 238 HDINVI 243>NP_001257568 Length = 188 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GSHDINVV 8 G++D+NV+ Sbjct: 66 GNYDVNVI 73>XP_005261936 Length = 202 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GSHDINVV 8 G++D+NV+ Sbjct: 80 GNYDVNVI 87>XP_005261935 Length = 202 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GSHDINVV 8 G++D+NV+ Sbjct: 80 GNYDVNVI 87>XP_005261934 Length = 202 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GSHDINVV 8 G++D+NV+ Sbjct: 80 GNYDVNVI 87>XP_005261933 Length = 202 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GSHDINVV 8 G++D+NV+ Sbjct: 80 GNYDVNVI 87>NP_055691 Length = 202 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GSHDINVV 8 G++D+NV+ Sbjct: 80 GNYDVNVI 87>NP_001269155 Length = 511 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HDINVVT 9 HDI +VT Sbjct: 114 HDIGIVT 120>NP_001269156 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HDINVVT 9 HDI +VT Sbjct: 72 HDIGIVT 78>NP_001269154 Length = 511 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HDINVVT 9 HDI +VT Sbjct: 114 HDIGIVT 120>NP_001269157 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HDINVVT 9 HDI +VT Sbjct: 72 HDIGIVT 78>NP_002706 Length = 309 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HDINVVT 9 HD NVVT Sbjct: 252 HDRNVVT 258>NP_004658 Length = 4834 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GSHDINV 7 G HD+NV Sbjct: 2601 GLHDLNV 2607>NP_001009552 Length = 309 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HDINVVT 9 HD NVVT Sbjct: 252 HDRNVVT 258>XP_006720790 Length = 4748 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GSHDINV 7 G HD+NV Sbjct: 2515 GLHDLNV 2521>XP_005268334 Length = 4796 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GSHDINV 7 G HD+NV Sbjct: 2563 GLHDLNV 2569>XP_005268333 Length = 4796 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GSHDINV 7 G HD+NV Sbjct: 2563 GLHDLNV 2569>XP_006720789 Length = 4829 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GSHDINV 7 G HD+NV Sbjct: 2596 GLHDLNV 2602>NP_055444 Length = 1344 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 733 HDLNVI 738>NP_653271 Length = 1454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SHDINVV 8 SH IN+V Sbjct: 309 SHQINIV 315>XP_006725174 Length = 1306 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 695 HDLNVI 700>XP_006725173 Length = 1328 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 758 HDLNVI 763>XP_006725172 Length = 1329 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 718 HDLNVI 723>XP_006725171 Length = 1330 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 719 HDLNVI 724>XP_006725170 Length = 1345 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 734 HDLNVI 739>XP_006725169 Length = 1368 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 757 HDLNVI 762>XP_006725168 Length = 1368 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 757 HDLNVI 762>XP_006725167 Length = 1369 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 758 HDLNVI 763>XP_005266099 Length = 1306 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 695 HDLNVI 700>XP_006716304 Length = 1328 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 758 HDLNVI 763>XP_006716303 Length = 1329 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 718 HDLNVI 723>XP_006716302 Length = 1330 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 719 HDLNVI 724>XP_005266098 Length = 1345 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 734 HDLNVI 739>XP_005266097 Length = 1368 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 757 HDLNVI 762>XP_005266096 Length = 1368 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 757 HDLNVI 762>XP_006716301 Length = 1369 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 HDINVV 8 HD+NV+ Sbjct: 758 HDLNVI 763>NP_115560 Length = 1194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DINVVT 9 DINV+T Sbjct: 885 DINVIT 890>NP_001180246 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HDINVVT 9 HD NV+T Sbjct: 192 HDGNVIT 198>NP_001180244 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HDINVVT 9 HD NV+T Sbjct: 192 HDGNVIT 198>NP_001180245 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HDINVVT 9 HD NV+T Sbjct: 143 HDGNVIT 149>NP_996806 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HDINV 7 HDINV Sbjct: 23 HDINV 27>NP_071350 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HDINVVT 9 HD NV+T Sbjct: 192 HDGNVIT 198>NP_001180243 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HDINVVT 9 HD NV+T Sbjct: 192 HDGNVIT 198>NP_001252541 Length = 2371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HDINV 7 HDINV Sbjct: 1355 HDINV 1359>NP_057368 Length = 2376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HDINV 7 HDINV Sbjct: 1360 HDINV 1364>NP_996882 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 HDINV 7 HDINV Sbjct: 1360 HDINV 1364>NP_777603 Length = 122 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 1 GSHDIN 6 G HD+N Sbjct: 69 GEHDLN 74>NP_001167449 Length = 92 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 1 GSHDIN 6 G HD+N Sbjct: 39 GEHDLN 44>XP_005260183 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DINVVT 9 DINV+T Sbjct: 400 DINVIT 405>XP_006716489 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GSHDINV 7 G H++NV Sbjct: 198 GGHELNV 204>XP_006716487 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GSHDINV 7 G H++NV Sbjct: 271 GGHELNV 277>XP_006716486 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GSHDINV 7 G H++NV Sbjct: 271 GGHELNV 277>XP_006716485 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GSHDINV 7 G H++NV Sbjct: 271 GGHELNV 277>XP_005251226 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GSHDINV 7 G H++NV Sbjct: 284 GGHELNV 290>XP_005249963 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SHDINVV 8 +HD NVV Sbjct: 117 NHDTNVV 123>XP_005271313 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DINVVT 9 DINV+T Sbjct: 627 DINVIT 632>XP_006711009 Length = 1108 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DINVVT 9 DINV+T Sbjct: 1082 DINVIT 1087>XP_005271309 Length = 1228 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DINVVT 9 DINV+T Sbjct: 1082 DINVIT 1087>XP_006711008 Length = 1262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DINVVT 9 DINV+T Sbjct: 1082 DINVIT 1087>NP_878901 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SHDINVV 8 +HD NVV Sbjct: 124 NHDTNVV 130>NP_878902 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SHDINVV 8 +HD NVV Sbjct: 91 NHDTNVV 97>NP_004895 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SHDINVV 8 +HD NVV Sbjct: 117 NHDTNVV 123>NP_149014 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DINVVT 9 DINV+T Sbjct: 467 DINVIT 472Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.131 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 514,496 Number of extensions: 660 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |