Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 20 509 NP_444254 20 509 NP_444253 20 509 NP_444255 20 509 XP_005247551 20 509 XP_005247550 20 509 XP_006713712 20 509 XP_005247549 20 509 NP_056150 17 2528 NP_005112 17 2528 XP_006719370 17 2528 XP_006719369 17 2528 XP_006719368 17 2528 NP_037473 17 4312 NP_945343 17 4312 NP_852478 16 5631 NP_056141 16 5631 NP_001164108 16 5631 NP_001193900 16 5631 NP_002828 16 5631 NP_001103224 16 5631 NP_001193901 16 5631 XP_006719592 16 5631 XP_006719591 16 5631 XP_005277570 16 5631 XP_005277569 16 5631 XP_006711309 16 5631 XP_005277568 16 5631 XP_005277567 16 5631 NP_003283 16 7355 NP_001139334 16 7355 NP_003406 16 7355 NP_001159354 16 7355 NP_001159353 16 7355 NP_775271 16 7355 NP_057029 16 7355 NP_644812 16 7355 NP_001268389 16 7355 NP_001268386 16 7355 NP_722576 16 7355 NP_001268387 16 7355 XP_005262424 16 7355 XP_006723864 16 7355 XP_005260471 16 7355 XP_005245528 16 7355 NP_872418 15 9605 NP_079030 15 9605 NP_689680 15 9605 XP_005257331 15 9605 XP_005257330 15 9605 XP_005252955 15 9605 XP_006717041 15 9605 XP_005248660 15 9605 XP_005248658 15 9605>NP_444256 Length = 1794 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RSTSFNVQ 9 RSTSFNVQ Sbjct: 1316 RSTSFNVQ 1323>NP_444254 Length = 1845 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RSTSFNVQ 9 RSTSFNVQ Sbjct: 1316 RSTSFNVQ 1323>NP_444253 Length = 1914 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RSTSFNVQ 9 RSTSFNVQ Sbjct: 1385 RSTSFNVQ 1392>NP_444255 Length = 1863 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RSTSFNVQ 9 RSTSFNVQ Sbjct: 1385 RSTSFNVQ 1392>XP_005247551 Length = 1855 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RSTSFNVQ 9 RSTSFNVQ Sbjct: 1326 RSTSFNVQ 1333>XP_005247550 Length = 1856 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RSTSFNVQ 9 RSTSFNVQ Sbjct: 1395 RSTSFNVQ 1402>XP_006713712 Length = 1923 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RSTSFNVQ 9 RSTSFNVQ Sbjct: 1395 RSTSFNVQ 1402>XP_005247549 Length = 1924 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RSTSFNVQ 9 RSTSFNVQ Sbjct: 1395 RSTSFNVQ 1402>NP_056150 Length = 2210 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GRSTSFNVQ 9 GRST+ N+Q Sbjct: 1973 GRSTALNMQ 1981>NP_005112 Length = 2174 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GRSTSFNVQ 9 GRST+ N+Q Sbjct: 1937 GRSTTLNMQ 1945>XP_006719370 Length = 2076 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GRSTSFNVQ 9 GRST+ N+Q Sbjct: 1839 GRSTALNMQ 1847>XP_006719369 Length = 2200 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GRSTSFNVQ 9 GRST+ N+Q Sbjct: 1963 GRSTALNMQ 1971>XP_006719368 Length = 2209 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GRSTSFNVQ 9 GRST+ N+Q Sbjct: 1972 GRSTALNMQ 1980>NP_037473 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRSTSFNV 8 G+ST FNV Sbjct: 34 GKSTFFNV 41>NP_945343 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GRSTSFNVQ 9 GR+TSF+ Q Sbjct: 503 GRATSFDSQ 511>NP_852478 Length = 1179 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RSTSFNVQ 9 R+T+FNV+ Sbjct: 417 RNTTFNVE 424>NP_056141 Length = 1071 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRSTSFN 7 GRS SFN Sbjct: 926 GRSKSFN 932>NP_001164108 Length = 1070 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRSTSFN 7 GRS SFN Sbjct: 925 GRSKSFN 931>NP_001193900 Length = 1907 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRSTSFNVQ 9 GRS FNV+ Sbjct: 1235 GRSYQFNVK 1243>NP_002828 Length = 1997 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRSTSFNVQ 9 GRS FNV+ Sbjct: 1325 GRSYQFNVK 1333>NP_001103224 Length = 2215 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRSTSFNVQ 9 GRS FNV+ Sbjct: 1543 GRSYQFNVK 1551>NP_001193901 Length = 1907 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRSTSFNVQ 9 GRS FNV+ Sbjct: 1235 GRSYQFNVK 1243>XP_006719592 Length = 2012 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRSTSFNVQ 9 GRS FNV+ Sbjct: 1325 GRSYQFNVK 1333>XP_006719591 Length = 2230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRSTSFNVQ 9 GRS FNV+ Sbjct: 1543 GRSYQFNVK 1551>XP_005277570 Length = 918 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRSTSFN 7 GRS SFN Sbjct: 773 GRSKSFN 779>XP_005277569 Length = 918 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRSTSFN 7 GRS SFN Sbjct: 773 GRSKSFN 779>XP_006711309 Length = 973 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRSTSFN 7 GRS SFN Sbjct: 926 GRSKSFN 932>XP_005277568 Length = 1070 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRSTSFN 7 GRS SFN Sbjct: 925 GRSKSFN 931>XP_005277567 Length = 1071 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRSTSFN 7 GRS SFN Sbjct: 926 GRSKSFN 932>NP_003283 Length = 2363 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSTSFNVQ 9 RSTS NVQ Sbjct: 1749 RSTSPNVQ 1756>NP_001139334 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GRSTSFNV 8 GR SFN+ Sbjct: 5 GRGQSFNI 12>NP_003406 Length = 947 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRSTSFNVQ 9 G+S SFN Q Sbjct: 730 GKSFSFNSQ 738>NP_001159354 Length = 864 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRSTSFNVQ 9 G+S SFN Q Sbjct: 647 GKSFSFNSQ 655>NP_001159353 Length = 947 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRSTSFNVQ 9 G+S SFN Q Sbjct: 730 GKSFSFNSQ 738>NP_775271 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RSTSFNVQ 9 +ST FNV+ Sbjct: 157 KSTQFNVE 164>NP_057029 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RSTSFNVQ 9 +ST FNV+ Sbjct: 157 KSTQFNVE 164>NP_644812 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STSFNVQ 9 STSF+VQ Sbjct: 207 STSFDVQ 213>NP_001268389 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RSTSFNVQ 9 +ST FNV+ Sbjct: 157 KSTQFNVE 164>NP_001268386 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RSTSFNVQ 9 +ST FNV+ Sbjct: 43 KSTQFNVE 50>NP_722576 Length = 3080 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TSFNVQ 9 TSFN+Q Sbjct: 1761 TSFNIQ 1766>NP_001268387 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RSTSFNVQ 9 +ST FNV+ Sbjct: 186 KSTQFNVE 193>XP_005262424 Length = 2875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TSFNVQ 9 TSFN+Q Sbjct: 1556 TSFNIQ 1561>XP_006723864 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RSTSFNVQ 9 +ST FNV+ Sbjct: 157 KSTQFNVE 164>XP_005260471 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RSTSFNVQ 9 +ST FNV+ Sbjct: 157 KSTQFNVE 164>XP_005245528 Length = 2439 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RSTSFNVQ 9 RSTS NVQ Sbjct: 1825 RSTSPNVQ 1832>NP_872418 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STSFNVQ 9 ST+FN+Q Sbjct: 36 STAFNLQ 42>NP_079030 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 STSFNV 8 STSFN+ Sbjct: 165 STSFNI 170>NP_689680 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRSTSFNVQ 9 G +T+FNV+ Sbjct: 537 GFTTTFNVE 545>XP_005257331 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRSTSFNVQ 9 G +T+FNV+ Sbjct: 483 GFTTTFNVE 491>XP_005257330 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRSTSFNVQ 9 G +T+FNV+ Sbjct: 577 GFTTTFNVE 585>XP_005252955 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STSFNVQ 9 ST+FN+Q Sbjct: 36 STAFNLQ 42>XP_006717041 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRSTSFNV 8 GR T+F+V Sbjct: 679 GRKTNFSV 686>XP_005248660 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 STSFNV 8 STSFN+ Sbjct: 13 STSFNI 18>XP_005248658 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 STSFNV 8 STSFN+ Sbjct: 165 STSFNI 170Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.121 0.324 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 405,836 Number of extensions: 684 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |