Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 20 390 NP_000240 20 390 NP_001161089 20 390 NP_899200 17 4312 NP_001186571 17 4312 XP_006713547 17 4312 XP_006713546 17 4312 XP_005247135 17 4312 XP_005247134 17 4312 NP_001278236 16 5631 NP_001243469 16 5631 NP_001243468 16 5631 NP_001278234 16 5631 NP_057475 16 5631 XP_006716947 16 5631 NP_079410 16 7355 NP_115597 16 7355 XP_006723946 16 7355 XP_005260632 16 7355 XP_005260631 16 7355 XP_005260630 16 7355 XP_005256233 16 7355 XP_005256232 16 7355 XP_005256231 16 7355 XP_005256229 16 7355 XP_005256228 16 7355 XP_005256227 16 7355 XP_006721346 16 7355 XP_005256226 16 7355 XP_006721345 16 7355 XP_006721344 16 7355 XP_006721343 16 7355 XP_005256225 16 7355 XP_005265218 16 7355 NP_002664 15 9605 NP_001123554 15 9605 NP_005989 15 9605 NP_001165783 15 9605 NP_001002001 15 9605 NP_115875 15 9605 NP_006868 15 9605 NP_001002000 15 9605 NP_001186672 15 9605 NP_001002002 15 9605 NP_002661 15 9605 NP_001138791 15 9605 NP_003240 15 9605 NP_001269950 15 9605 NP_001185940 15 9605 NP_001269952 15 9605 NP_057660 15 9605 NP_001269951 15 9605 XP_006720228 15 9605 XP_005267799 15 9605 XP_005267797 15 9605 XP_005267798 15 9605 XP_006713725 15 9605 XP_006713724 15 9605 XP_006713723 15 9605 XP_006713269 15 9605>NP_001245200 Length = 687 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNAVSREMI 9 GNAVSRE+I Sbjct: 221 GNAVSRELI 229>NP_000240 Length = 756 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNAVSREMI 9 GNAVSRE+I Sbjct: 221 GNAVSRELI 229>NP_001161089 Length = 658 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNAVSREMI 9 GNAVSRE+I Sbjct: 123 GNAVSRELI 131>NP_899200 Length = 1261 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNAVSREM 8 GN VS+EM Sbjct: 686 GNQVSKEM 693>NP_001186571 Length = 911 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNAVSREM 8 GN VS+EM Sbjct: 336 GNQVSKEM 343>XP_006713547 Length = 845 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNAVSREM 8 GN VS+EM Sbjct: 245 GNQVSKEM 252>XP_006713546 Length = 919 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNAVSREM 8 GN VS+EM Sbjct: 319 GNQVSKEM 326>XP_005247135 Length = 936 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNAVSREM 8 GN VS+EM Sbjct: 336 GNQVSKEM 343>XP_005247134 Length = 1286 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNAVSREM 8 GN VS+EM Sbjct: 686 GNQVSKEM 693>NP_001278236 Length = 138 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 GN +SR++I Sbjct: 108 GNTLSRDLI 116>NP_001243469 Length = 231 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 GN +SR++I Sbjct: 108 GNTLSRDLI 116>NP_001243468 Length = 232 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 GN +SR++I Sbjct: 108 GNTLSRDLI 116>NP_001278234 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 GN +SR++I Sbjct: 95 GNTLSRDLI 103>NP_057475 Length = 178 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 GN +SR++I Sbjct: 108 GNTLSRDLI 116>XP_006716947 Length = 160 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 G VSREM+ Sbjct: 71 GGYVSREMV 79>NP_079410 Length = 2881 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 940 GSLISRQMI 948>NP_115597 Length = 2715 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 541 GSQISRQMI 549>XP_006723946 Length = 1414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 541 GSQISRQMI 549>XP_005260632 Length = 2377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 541 GSQISRQMI 549>XP_005260631 Length = 2667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 541 GSQISRQMI 549>XP_005260630 Length = 2693 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 519 GSQISRQMI 527>XP_005256233 Length = 2391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 433 GSLISRQMI 441>XP_005256232 Length = 2424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 466 GSLISRQMI 474>XP_005256231 Length = 2573 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 940 GSLISRQMI 948>XP_005256229 Length = 2881 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 940 GSLISRQMI 948>XP_005256228 Length = 2882 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 940 GSLISRQMI 948>XP_005256227 Length = 2897 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 940 GSLISRQMI 948>XP_006721346 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 940 GSLISRQMI 948>XP_005256226 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 940 GSLISRQMI 948>XP_006721345 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 940 GSLISRQMI 948>XP_006721344 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 940 GSLISRQMI 948>XP_006721343 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 940 GSLISRQMI 948>XP_005256225 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+ +SR+MI Sbjct: 940 GSLISRQMI 948>XP_005265218 Length = 687 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GNAVSR 6 GNAVSR Sbjct: 221 GNAVSR 226>NP_002664 Length = 2135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GNAVSREM 8 G+AVSR++ Sbjct: 450 GSAVSRDL 457>NP_001123554 Length = 2135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GNAVSREM 8 G+AVSR++ Sbjct: 450 GSAVSRDL 457>NP_005989 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNAVSREM 8 GNA+ RE+ Sbjct: 63 GNAILREI 70>NP_001165783 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAVSREMI 9 NAV +EMI Sbjct: 563 NAVRQEMI 570>NP_001002001 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN V+ EM+ Sbjct: 157 GNVVTGEMV 165>NP_115875 Length = 182 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN VSR+ + Sbjct: 19 GNKVSRQSV 27>NP_006868 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN V+ EM+ Sbjct: 157 GNVVTGEMV 165>NP_001002000 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN V+ EM+ Sbjct: 157 GNVVTGEMV 165>NP_001186672 Length = 152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN VSR+ + Sbjct: 19 GNKVSRQSV 27>NP_001002002 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN V+ EM+ Sbjct: 157 GNVVTGEMV 165>NP_002661 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAVSREMI 9 NAV +EMI Sbjct: 563 NAVRQEMI 570>NP_001138791 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAVSREMI 9 NAV +EMI Sbjct: 563 NAVRQEMI 570>NP_003240 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNAVSREMI 9 G+AV RE++ Sbjct: 528 GSAVPRELL 536>NP_001269950 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN V+ EM+ Sbjct: 121 GNVVTGEMV 129>NP_001185940 Length = 84 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN VSR+ + Sbjct: 19 GNKVSRQSV 27>NP_001269952 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN V+ EM+ Sbjct: 129 GNVVTGEMV 137>NP_057660 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN V+ EM+ Sbjct: 175 GNVVTGEMV 183>NP_001269951 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN V+ EM+ Sbjct: 175 GNVVTGEMV 183>XP_006720228 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN V+ EM+ Sbjct: 121 GNVVTGEMV 129>XP_005267799 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN V+ EM+ Sbjct: 157 GNVVTGEMV 165>XP_005267797 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN V+ EM+ Sbjct: 157 GNVVTGEMV 165>XP_005267798 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNAVSREMI 9 GN V+ EM+ Sbjct: 157 GNVVTGEMV 165>XP_006713725 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAVSREMI 9 NAV +EMI Sbjct: 563 NAVRQEMI 570>XP_006713724 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAVSREMI 9 NAV +EMI Sbjct: 563 NAVRQEMI 570>XP_006713723 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAVSREMI 9 NAV +EMI Sbjct: 563 NAVRQEMI 570>XP_006713269 Length = 2052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GNAVSREM 8 G+AVSR++ Sbjct: 367 GSAVSRDL 374Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.127 0.320 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 373,120 Number of extensions: 573 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |