Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001242953 19 665 NP_067049 19 665 NP_001242955 19 665 NP_001242954 19 665 XP_006717997 19 665 XP_005270071 19 665 NP_001138498 18 1482 NP_055365 18 1482 NP_109593 17 4312 NP_109595 17 4312 NP_109596 17 4312 NP_109592 17 4312 NP_109594 17 4312 NP_002839 17 4312 NP_001139281 17 4312 NP_001070654 17 4312 NP_079005 17 4312 XP_006723449 17 4312 NP_078966 16 5631 XP_005273759 16 5631 XP_006718820 16 5631 NP_005458 16 5631 NP_056126 16 7355 NP_005109 16 7355 NP_955806 16 7355 NP_955805 16 7355 XP_005247192 16 7355 XP_005246482 16 7355 XP_005246481 16 7355 XP_006712450 16 7355 XP_005246480 16 7355 XP_006712449 16 7355 XP_005246478 16 7355 NP_001161210 15 9605 NP_065176 15 9605 NP_055573 15 9605 NP_055324 15 9605 NP_940999 15 9605 XP_006724285 15 9605 XP_005271603 15 9605 XP_005271602 15 9605 XP_006711674 15 9605 XP_006711673 15 9605 XP_006711672 15 9605 XP_006711671 15 9605 XP_006711670 15 9605 XP_005245629 15 9605 NP_004913 15 9605 NP_004751 15 9605>NP_001242953 Length = 714 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLVSELRAE 9 GLV+ELRAE Sbjct: 617 GLVTELRAE 625>NP_067049 Length = 698 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLVSELRAE 9 GLV+ELRAE Sbjct: 601 GLVTELRAE 609>NP_001242955 Length = 608 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLVSELRAE 9 GLV+ELRAE Sbjct: 511 GLVTELRAE 519>NP_001242954 Length = 704 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLVSELRAE 9 GLV+ELRAE Sbjct: 607 GLVTELRAE 615>XP_006717997 Length = 608 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLVSELRAE 9 GLV+ELRAE Sbjct: 511 GLVTELRAE 519>XP_005270071 Length = 624 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLVSELRAE 9 GLV+ELRAE Sbjct: 527 GLVTELRAE 535>NP_001138498 Length = 2299 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GLVSELRAE 9 GLV+ELR+E Sbjct: 2230 GLVAELRSE 2238>NP_055365 Length = 1032 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LVSELRAE 9 LVSELRAE Sbjct: 279 LVSELRAE 286>NP_109593 Length = 377 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GLVSELRA 8 GLVSE+R+ Sbjct: 327 GLVSEMRS 334>NP_109595 Length = 377 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GLVSELRA 8 GLVSE+R+ Sbjct: 327 GLVSEMRS 334>NP_109596 Length = 405 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GLVSELRA 8 GLVSE+R+ Sbjct: 355 GLVSEMRS 362>NP_109592 Length = 1216 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GLVSELRA 8 GLVSE+R+ Sbjct: 1166 GLVSEMRS 1173>NP_109594 Length = 405 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GLVSELRA 8 GLVSE+R+ Sbjct: 355 GLVSEMRS 362>NP_002839 Length = 1188 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GLVSELRA 8 GLVSE+R+ Sbjct: 1138 GLVSEMRS 1145>NP_001139281 Length = 2036 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VSELRAE 9 VSELRAE Sbjct: 1291 VSELRAE 1297>NP_001070654 Length = 2003 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VSELRAE 9 VSELRAE Sbjct: 1258 VSELRAE 1264>NP_079005 Length = 1995 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VSELRAE 9 VSELRAE Sbjct: 1250 VSELRAE 1256>XP_006723449 Length = 2003 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VSELRAE 9 VSELRAE Sbjct: 1258 VSELRAE 1264>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LVSELRA 8 LVSELRA Sbjct: 916 LVSELRA 922>XP_005273759 Length = 451 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVSELRAE 9 LVSE++AE Sbjct: 51 LVSEMKAE 58>XP_006718820 Length = 707 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVSELRAE 9 LVSE++AE Sbjct: 51 LVSEMKAE 58>NP_005458 Length = 740 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVSELRAE 9 LVSE++AE Sbjct: 51 LVSEMKAE 58>NP_056126 Length = 1896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVSELRAE 9 ++SELRAE Sbjct: 1776 VLSELRAE 1783>NP_005109 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVSELRAE 9 LVS+LRA+ Sbjct: 55 LVSQLRAQ 62>NP_955806 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVSELRAE 9 L+SELR E Sbjct: 697 LISELRKE 704>NP_955805 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVSELRAE 9 L+SELR E Sbjct: 697 LISELRKE 704>XP_005247192 Length = 961 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVSELRAE 9 L+SELR E Sbjct: 708 LISELRKE 715>XP_005246482 Length = 1724 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVSELRAE 9 ++SELRAE Sbjct: 1592 VLSELRAE 1599>XP_005246481 Length = 1804 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVSELRAE 9 ++SELRAE Sbjct: 1684 VLSELRAE 1691>XP_006712450 Length = 1816 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVSELRAE 9 ++SELRAE Sbjct: 1684 VLSELRAE 1691>XP_005246480 Length = 1816 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVSELRAE 9 ++SELRAE Sbjct: 1684 VLSELRAE 1691>XP_006712449 Length = 1908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVSELRAE 9 ++SELRAE Sbjct: 1776 VLSELRAE 1783>XP_005246478 Length = 1908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVSELRAE 9 ++SELRAE Sbjct: 1776 VLSELRAE 1783>NP_001161210 Length = 1483 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSELRAE 9 VSELR+E Sbjct: 913 VSELRSE 919>NP_065176 Length = 1877 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSELRAE 9 VSELR+E Sbjct: 1307 VSELRSE 1313>NP_055573 Length = 992 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLVSELR 7 GLV ELR Sbjct: 137 GLVQELR 143>NP_055324 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLVSELR 7 GL+SEL+ Sbjct: 8 GLISELK 14>NP_940999 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLVSELRAE 9 GL+ LRA+ Sbjct: 1034 GLIDSLRAQ 1042>XP_006724285 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLVSELR 7 GL+SEL+ Sbjct: 8 GLISELK 14>XP_005271603 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLVSELR 7 GLV ELR Sbjct: 137 GLVQELR 143>XP_005271602 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLVSELR 7 GLV ELR Sbjct: 137 GLVQELR 143>XP_006711674 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSELRAE 9 VSELR+E Sbjct: 815 VSELRSE 821>XP_006711673 Length = 1549 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSELRAE 9 VSELR+E Sbjct: 979 VSELRSE 985>XP_006711672 Length = 1557 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSELRAE 9 VSELR+E Sbjct: 987 VSELRSE 993>XP_006711671 Length = 2153 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSELRAE 9 VSELR+E Sbjct: 1583 VSELRSE 1589>XP_006711670 Length = 2161 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSELRAE 9 VSELR+E Sbjct: 1591 VSELRSE 1597>XP_005245629 Length = 2164 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSELRAE 9 VSELR+E Sbjct: 1594 VSELRSE 1600>NP_004913 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLVSELRAE 9 GL+ LRA+ Sbjct: 1034 GLIDSLRAQ 1042>NP_004751 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GLVSELRA 8 GL++E+RA Sbjct: 41 GLLTEIRA 48Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.131 0.316 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 356,506 Number of extensions: 496 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |