Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 19 665 XP_005263378 18 1135 NP_003719 18 1135 NP_116559 17 2528 NP_002898 17 2528 NP_003881 17 2528 NP_714928 17 2528 XP_006719196 17 2528 XP_005253521 17 2528 XP_005253519 17 2528 XP_005253520 17 2528 XP_005253518 17 2528 XP_006713930 17 2528 XP_006713929 17 2528 XP_006713928 17 2528 XP_006726693 17 3301 NP_694987 17 4312 NP_060166 17 4312 NP_000350 16 5631 NP_001003845 16 5631 XP_005246599 16 5631 NP_777596 16 7355 NP_004924 16 7355 NP_001128653 16 7355 NP_001011547 16 7355 NP_001207417 16 7355 NP_996896 16 7355 NP_817123 16 7355 XP_006721183 16 7355 XP_006714215 16 7355 XP_006714214 16 7355 XP_005262915 16 7355 NP_001127925 16 7355 NP_055806 16 7355 NP_065387 16 7355 NP_001248 16 7355 NP_001207419 16 7355 NP_001207418 16 7355 NP_766638 15 9605 NP_542415 15 9605 NP_542416 15 9605 NP_542414 15 9605 NP_006255 15 9605 NP_001186064 15 9605 NP_620636 15 9605 NP_004171 15 9605 NP_003062 15 9605 XP_005261809 15 9605 XP_005263224 15 9605 XP_005247781 15 9605 XP_005246268 15 9605 XP_005246267 15 9605 XP_005246265 15 9605 XP_005246264 15 9605 XP_005246263 15 9605>NP_004251 Length = 1208 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GLTATATR 8 GLTATATR Sbjct: 639 GLTATATR 646>XP_005263378 Length = 950 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GLTATATRC 9 GL ATA RC Sbjct: 4 GLRATAARC 12>NP_003719 Length = 931 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GLTATATRC 9 GL ATA RC Sbjct: 4 GLRATAARC 12>NP_116559 Length = 649 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GLTATAT 7 GLTATAT Sbjct: 252 GLTATAT 258>NP_002898 Length = 649 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GLTATAT 7 GLTATAT Sbjct: 252 GLTATAT 258>NP_003881 Length = 5405 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GLTATATRC 9 GLT TRC Sbjct: 5143 GLTGCTTRC 5151>NP_714928 Length = 992 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLTATATRC 9 GLT +TRC Sbjct: 625 GLTEESTRC 633>XP_006719196 Length = 649 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GLTATAT 7 GLTATAT Sbjct: 252 GLTATAT 258>XP_005253521 Length = 649 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GLTATAT 7 GLTATAT Sbjct: 252 GLTATAT 258>XP_005253519 Length = 649 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GLTATAT 7 GLTATAT Sbjct: 252 GLTATAT 258>XP_005253520 Length = 649 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GLTATAT 7 GLTATAT Sbjct: 252 GLTATAT 258>XP_005253518 Length = 649 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GLTATAT 7 GLTATAT Sbjct: 252 GLTATAT 258>XP_006713930 Length = 772 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLTATATRC 9 GLT +TRC Sbjct: 625 GLTEESTRC 633>XP_006713929 Length = 930 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLTATATRC 9 GLT +TRC Sbjct: 625 GLTEESTRC 633>XP_006713928 Length = 931 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLTATATRC 9 GLT +TRC Sbjct: 625 GLTEESTRC 633>XP_006726693 Length = 509 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLTATATRC 9 G +ATAT C Sbjct: 249 GASATATAC 257>NP_694987 Length = 391 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLTATATRC 9 GL+++ TRC Sbjct: 188 GLSSSPTRC 196>NP_060166 Length = 1143 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLTATATRC 9 GL+++ TRC Sbjct: 188 GLSSSPTRC 196>NP_000350 Length = 817 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GLTATATRC 9 G+T T RC Sbjct: 382 GVTTTVLRC 390>NP_001003845 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTATATRC 9 L ATA RC Sbjct: 264 LAATARRC 271>XP_005246599 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LTATATRC 9 L ATA RC Sbjct: 308 LAATARRC 315>NP_777596 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GLTATATRC 9 G TAT RC Sbjct: 59 GTTATFHRC 67>NP_004924 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLTATAT 7 GLTATA+ Sbjct: 239 GLTATAS 245>NP_001128653 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GLTATATRC 9 GLT AT C Sbjct: 311 GLTVLATWC 319>NP_001011547 Length = 681 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GLTATATRC 9 GLT AT C Sbjct: 286 GLTVLATWC 294>NP_001207417 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLTATAT 7 GLT TAT Sbjct: 389 GLTGTAT 395>NP_996896 Length = 161 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLTATATR 8 GLTA +TR Sbjct: 139 GLTACSTR 146>NP_817123 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GLTATATRC 9 G TAT T C Sbjct: 476 GKTATGTIC 484>XP_006721183 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLTATAT 7 GLT TAT Sbjct: 342 GLTGTAT 348>XP_006714215 Length = 3544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GLTATATR 8 G T TATR Sbjct: 2585 GFTMTATR 2592>XP_006714214 Length = 3544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GLTATATR 8 G T TATR Sbjct: 2585 GFTMTATR 2592>XP_005262915 Length = 3544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GLTATATR 8 G T TATR Sbjct: 2585 GFTMTATR 2592>NP_001127925 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GLTATATRC 9 G TAT T C Sbjct: 476 GKTATGTIC 484>NP_055806 Length = 3526 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GLTATATR 8 G T TATR Sbjct: 2567 GFTMTATR 2574>NP_065387 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TATATRC 9 TAT +RC Sbjct: 905 TATVSRC 911>NP_001248 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLTATAT 7 GLT TAT Sbjct: 342 GLTGTAT 348>NP_001207419 Length = 459 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLTATAT 7 GLT TAT Sbjct: 88 GLTGTAT 94>NP_001207418 Length = 674 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLTATAT 7 GLT TAT Sbjct: 303 GLTGTAT 309>NP_766638 Length = 988 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 TATATRC 9 TAT RC Sbjct: 259 TATGVRC 265>NP_542415 Length = 2294 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GLTATATRC 9 G TAT RC Sbjct: 316 GETATYRRC 324>NP_542416 Length = 2490 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GLTATATRC 9 G TAT RC Sbjct: 316 GETATYRRC 324>NP_542414 Length = 2485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GLTATATRC 9 G TAT RC Sbjct: 316 GETATYRRC 324>NP_006255 Length = 2466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GLTATATRC 9 G TAT RC Sbjct: 316 GETATYRRC 324>NP_001186064 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TATATRC 9 TAT T+C Sbjct: 171 TATETQC 177>NP_620636 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLTATATRC 9 GL+ A+RC Sbjct: 352 GLSKDASRC 360>NP_004171 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TATATRC 9 TAT T+C Sbjct: 171 TATETQC 177>NP_003062 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLTATATRC 9 GL+ A+RC Sbjct: 352 GLSKDASRC 360>XP_005261809 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 TATATRC 9 TAT RC Sbjct: 289 TATGVRC 295>XP_005263224 Length = 2491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GLTATATRC 9 G TAT RC Sbjct: 322 GETATYRRC 330>XP_005247781 Length = 1008 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLTATATRC 9 GL+ A+RC Sbjct: 352 GLSKDASRC 360>XP_005246268 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TATATRC 9 TAT T+C Sbjct: 172 TATETQC 178>XP_005246267 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TATATRC 9 TAT T+C Sbjct: 172 TATETQC 178>XP_005246265 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TATATRC 9 TAT T+C Sbjct: 230 TATETQC 236>XP_005246264 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TATATRC 9 TAT T+C Sbjct: 278 TATETQC 284>XP_005246263 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TATATRC 9 TAT T+C Sbjct: 279 TATETQC 285Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.124 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 297,997 Number of extensions: 457 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |