Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 18 1482 NP_001185763 18 1482 NP_055459 18 1482 XP_006726410 18 1482 XP_006711719 18 1482 XP_006711718 18 1482 XP_006711717 18 1482 XP_006711716 18 1482 XP_006711715 18 1482 XP_006711714 18 1482 XP_006711713 18 1482 XP_006711712 18 1482 XP_006711711 18 1482 XP_006711710 18 1482 XP_006711709 18 1482 XP_005277503 18 1482 XP_005273038 18 1482 XP_006711708 18 1482 XP_005277500 18 1482 XP_006711707 18 1482 XP_005277499 18 1482 XP_006711706 18 1482 XP_006711705 18 1482 XP_006711164 18 1482 XP_006710143 18 1482 XP_006710142 18 1482 XP_006710141 18 1482 NP_114408 17 4312 NP_001152758 17 4312 XP_006725507 16 5631 XP_003960032 16 5631 NP_848599 16 7355 NP_945314 16 7355 XP_006713081 16 7355 NP_001171588 15 9605 NP_004888 15 9605 NP_068761 15 9605 XP_006718141 15 9605 XP_005269610 15 9605>NP_001185761 Length = 2240 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1517 GLEPLALRL 1525>NP_001185763 Length = 2362 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1561 GLEPLALRL 1569>NP_055459 Length = 2346 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1561 GLEPLALRL 1569>XP_006726410 Length = 2087 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1364 GLEPLALRL 1372>XP_006711719 Length = 2302 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1517 GLEPLALRL 1525>XP_006711718 Length = 1436 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 568 GLEPLALRL 576>XP_006711717 Length = 2385 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1517 GLEPLALRL 1525>XP_006711716 Length = 2411 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1626 GLEPLALRL 1634>XP_006711715 Length = 2428 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1560 GLEPLALRL 1568>XP_006711714 Length = 2429 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1561 GLEPLALRL 1569>XP_006711713 Length = 2432 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1564 GLEPLALRL 1572>XP_006711712 Length = 2473 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1724 GLEPLALRL 1732>XP_006711711 Length = 2482 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1614 GLEPLALRL 1622>XP_006711710 Length = 2494 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1626 GLEPLALRL 1634>XP_006711709 Length = 2495 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1627 GLEPLALRL 1635>XP_005277503 Length = 2498 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1724 GLEPLALRL 1732>XP_005273038 Length = 2509 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1724 GLEPLALRL 1732>XP_006711708 Length = 2512 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1724 GLEPLALRL 1732>XP_005277500 Length = 2525 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1724 GLEPLALRL 1732>XP_006711707 Length = 2553 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1724 GLEPLALRL 1732>XP_005277499 Length = 2561 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1724 GLEPLALRL 1732>XP_006711706 Length = 2591 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1723 GLEPLALRL 1731>XP_006711705 Length = 2592 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1724 GLEPLALRL 1732>XP_006711164 Length = 2087 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 1364 GLEPLALRL 1372>XP_006710143 Length = 562 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 403 GLEPLALRL 411>XP_006710142 Length = 671 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 512 GLEPLALRL 520>XP_006710141 Length = 672 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GLE LALRL Sbjct: 513 GLEPLALRL 521>NP_114408 Length = 669 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GLEQLALRL 9 GLEQ LRL Sbjct: 42 GLEQRCLRL 50>NP_001152758 Length = 649 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GLEQLALRL 9 GLEQ LRL Sbjct: 42 GLEQRCLRL 50>XP_006725507 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GLEQLALR 8 GL+Q+A+R Sbjct: 3 GLDQMAIR 10>XP_003960032 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GLEQLALR 8 GL+Q+A+R Sbjct: 3 GLDQMAIR 10>NP_848599 Length = 3092 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 G+E+L LR+ Sbjct: 541 GIEELILRI 549>NP_945314 Length = 1386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEQLALRL 9 LEQL LR+ Sbjct: 999 LEQLCLRI 1006>XP_006713081 Length = 3964 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 G+E+L LR+ Sbjct: 541 GIEELILRI 549>NP_001171588 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEQLALRL 9 + QLALRL Sbjct: 154 MRQLALRL 161>NP_004888 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEQLALRL 9 + QLALRL Sbjct: 154 MRQLALRL 161>NP_068761 Length = 1133 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLEQLALRL 9 GL+Q+ LR+ Sbjct: 1060 GLKQIRLRI 1068>XP_006718141 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LEQLALRL 9 + QLALRL Sbjct: 154 MRQLALRL 161>XP_005269610 Length = 143 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LEQLALRL 9 L+QLAL+L Sbjct: 49 LQQLALQL 56Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.149 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 425,940 Number of extensions: 523 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |