Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 20 390 NP_005867 17 4312 XP_006720233 17 4312 XP_005267806 17 4312 XP_006720232 17 4312 XP_006720231 17 4312 XP_006712257 17 4312 XP_006712256 17 4312 XP_005246298 17 4312 XP_005246297 17 4312 XP_005246299 17 4312 XP_006712255 17 4312 XP_005246296 17 4312 XP_006712254 17 4312 XP_005246295 17 4312 XP_006712253 17 4312 XP_006712252 17 4312 XP_005246294 17 4312 XP_006712251 17 4312 XP_005246293 17 4312 XP_005246292 17 4312 XP_006712250 17 4312 NP_057421 17 4312 NP_001273758 16 5631 NP_660202 16 5631 NP_057121 16 5631 NP_000851 16 7355 NP_001139288 16 7355 NP_001243234 16 7355 NP_001351 16 7355 NP_001157289 16 7355 NP_001138909 16 7355 NP_002331 16 7355 NP_001138908 16 7355 NP_001001438 16 7355 XP_006724066 16 7355 NP_031392 15 9605 NP_001007268 15 9605 NP_001182570 15 9605 NP_055141 15 9605 XP_005254327 15 9605 XP_006720514 15 9605 XP_005254325 15 9605 XP_006720513 15 9605 XP_006720512 15 9605 XP_005254323 15 9605 XP_005254322 15 9605 XP_005246450 15 9605 XP_005246449 15 9605>NP_004351 Length = 882 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLDFAAKQQ 9 GLDF AKQQ Sbjct: 441 GLDFEAKQQ 449>NP_005867 Length = 3267 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 1624 GLEFAAK 1630>XP_006720233 Length = 388 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GLDFAAKQQ 9 GL+FA+K++ Sbjct: 132 GLNFASKEE 140>XP_005267806 Length = 422 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GLDFAAKQQ 9 GL+FA+K++ Sbjct: 95 GLNFASKEE 103>XP_006720232 Length = 438 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GLDFAAKQQ 9 GL+FA+K++ Sbjct: 132 GLNFASKEE 140>XP_006720231 Length = 459 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GLDFAAKQQ 9 GL+FA+K++ Sbjct: 132 GLNFASKEE 140>XP_006712257 Length = 1718 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 1624 GLEFAAK 1630>XP_006712256 Length = 2418 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 775 GLEFAAK 781>XP_005246298 Length = 2418 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 775 GLEFAAK 781>XP_005246297 Length = 2418 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 775 GLEFAAK 781>XP_005246299 Length = 2480 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 837 GLEFAAK 843>XP_006712255 Length = 2622 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 1624 GLEFAAK 1630>XP_005246296 Length = 2475 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 832 GLEFAAK 838>XP_006712254 Length = 2475 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 832 GLEFAAK 838>XP_005246295 Length = 3114 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 1471 GLEFAAK 1477>XP_006712253 Length = 3117 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 1474 GLEFAAK 1480>XP_006712252 Length = 3163 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 1520 GLEFAAK 1526>XP_005246294 Length = 3173 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 1530 GLEFAAK 1536>XP_006712251 Length = 3176 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 1533 GLEFAAK 1539>XP_005246293 Length = 3206 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 1563 GLEFAAK 1569>XP_005246292 Length = 3208 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 1565 GLEFAAK 1571>XP_006712250 Length = 3248 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL+FAAK Sbjct: 1605 GLEFAAK 1611>NP_057421 Length = 418 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GLDFAAKQQ 9 GL+FA+K++ Sbjct: 91 GLNFASKEE 99>NP_001273758 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLDFAAKQQ 9 G+D AAK Q Sbjct: 239 GVDLAAKAQ 247>NP_660202 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLDFAAKQQ 9 G+D AAK Q Sbjct: 239 GVDLAAKAQ 247>NP_057121 Length = 253 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LDFAAKQQ 9 LDF KQQ Sbjct: 126 LDFQGKQQ 133>NP_000851 Length = 266 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GLDFAAKQ 8 GLD+ +KQ Sbjct: 118 GLDYMSKQ 125>NP_001139288 Length = 178 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GLDFAAKQ 8 GLD+ +KQ Sbjct: 118 GLDYMSKQ 125>NP_001243234 Length = 143 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GLDFAAKQ 8 GLD+ +KQ Sbjct: 118 GLDYMSKQ 125>NP_001351 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDFAAKQQ 9 L FAAKQ+ Sbjct: 253 LSFAAKQR 260>NP_001157289 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDFAAKQQ 9 L FAAKQ+ Sbjct: 253 LSFAAKQR 260>NP_001138909 Length = 652 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLDFAAKQQ 9 GL+F +QQ Sbjct: 483 GLEFCRRQQ 491>NP_002331 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLDFAAKQQ 9 GL+F +QQ Sbjct: 563 GLEFCRRQQ 571>NP_001138908 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLDFAAKQQ 9 GL+F +QQ Sbjct: 552 GLEFCRRQQ 560>NP_001001438 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLDFAAKQQ 9 GL+F +QQ Sbjct: 563 GLEFCRRQQ 571>XP_006724066 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLDFAAKQQ 9 GL+F +QQ Sbjct: 563 GLEFCRRQQ 571>NP_031392 Length = 1463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLDFAAKQQ 9 GL+F+A +Q Sbjct: 91 GLNFSAPEQ 99>NP_001007268 Length = 1324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLDFAAKQQ 9 GL+F+A +Q Sbjct: 91 GLNFSAPEQ 99>NP_001182570 Length = 1461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLDFAAKQQ 9 GL+F+A +Q Sbjct: 91 GLNFSAPEQ 99>NP_055141 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL++AAK Sbjct: 46 GLEYAAK 52>XP_005254327 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL++AAK Sbjct: 49 GLEYAAK 55>XP_006720514 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL++AAK Sbjct: 49 GLEYAAK 55>XP_005254325 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL++AAK Sbjct: 49 GLEYAAK 55>XP_006720513 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL++AAK Sbjct: 49 GLEYAAK 55>XP_006720512 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL++AAK Sbjct: 49 GLEYAAK 55>XP_005254323 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL++AAK Sbjct: 46 GLEYAAK 52>XP_005254322 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLDFAAK 7 GL++AAK Sbjct: 49 GLEYAAK 55>XP_005246450 Length = 1461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLDFAAKQQ 9 GL+F+A +Q Sbjct: 91 GLNFSAPEQ 99>XP_005246449 Length = 1463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLDFAAKQQ 9 GL+F+A +Q Sbjct: 91 GLNFSAPEQ 99Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.132 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 414,925 Number of extensions: 491 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |