Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_680545 17 4312 NP_680544 17 4312 XP_005264090 17 4312 NP_060388 16 5631 NP_001091997 16 5631 XP_006714309 16 5631 NP_001012991 16 5631 NP_004706 16 7355 NP_430255 16 7355 NP_114408 16 7355 NP_001152758 16 7355 NP_061759 16 7355 XP_005266839 16 7355 NP_000537 15 9605 NP_001263689 15 9605 NP_001119584 15 9605 NP_001119586 15 9605 NP_001263625 15 9605 NP_001119590 15 9605 NP_001263690 15 9605 NP_001119585 15 9605 NP_001263624 15 9605 NP_001119588 15 9605 NP_001119587 15 9605 NP_001108451 15 9605 NP_001108454 15 9605 NP_001119589 15 9605 NP_003713 15 9605 NP_001108450 15 9605 NP_001108452 15 9605 NP_001108453 15 9605 NP_001191121 15 9605 NP_001119713 15 9605 NP_001191117 15 9605 NP_001119712 15 9605 NP_001119714 15 9605 NP_005418 15 9605 NP_001191116 15 9605 NP_001191115 15 9605 NP_001191119 15 9605 NP_001263627 15 9605 NP_001191113 15 9605 NP_001263628 15 9605 NP_001191118 15 9605 NP_001191120 15 9605 NP_001191114 15 9605 NP_001263626 15 9605 XP_005247903 15 9605 XP_005247901 15 9605 XP_005247900 15 9605>NP_680545 Length = 163 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GLALIRVEG 9 GLAL R+EG Sbjct: 41 GLALGRLEG 49>NP_680544 Length = 163 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GLALIRVEG 9 GLAL R+EG Sbjct: 41 GLALGRLEG 49>XP_005264090 Length = 473 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GLALIRVEG 9 GLAL R EG Sbjct: 7 GLALERAEG 15>NP_060388 Length = 336 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLALIRVEG 9 GLAL+ ++G Sbjct: 224 GLALLSIQG 232>NP_001091997 Length = 378 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LALIRVEG 9 L+LIR+EG Sbjct: 39 LSLIRLEG 46>XP_006714309 Length = 307 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLALIRVEG 9 GLAL+ ++G Sbjct: 195 GLALLSIQG 203>NP_001012991 Length = 97 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLALIRVEG 9 GLAL+R G Sbjct: 10 GLALLRAAG 18>NP_004706 Length = 961 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLALIRVEG 9 G L+R+EG Sbjct: 105 GAVLVRLEG 113>NP_430255 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLALIRVEG 9 G L+R+EG Sbjct: 105 GAVLVRLEG 113>NP_114408 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLALIRVEG 9 GLAL+R G Sbjct: 125 GLALVRPPG 133>NP_001152758 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLALIRVEG 9 GLAL+R G Sbjct: 125 GLALVRPPG 133>NP_061759 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GLALIRVE 8 G AL+R+E Sbjct: 226 GTALVRIE 233>XP_005266839 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLALIRVEG 9 G L+R+EG Sbjct: 105 GAVLVRLEG 113>NP_000537 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 194 LIRVEG 199>NP_001263689 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 155 LIRVEG 160>NP_001119584 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 194 LIRVEG 199>NP_001119586 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 194 LIRVEG 199>NP_001263625 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 155 LIRVEG 160>NP_001119590 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 155 LIRVEG 160>NP_001263690 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 155 LIRVEG 160>NP_001119585 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 194 LIRVEG 199>NP_001263624 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 155 LIRVEG 160>NP_001119588 Length = 209 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 62 LIRVEG 67>NP_001119587 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 62 LIRVEG 67>NP_001108451 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 264 LIRVEG 269>NP_001108454 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 170 LIRVEG 175>NP_001119589 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 62 LIRVEG 67>NP_003713 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 264 LIRVEG 269>NP_001108450 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 264 LIRVEG 269>NP_001108452 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 170 LIRVEG 175>NP_001108453 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 170 LIRVEG 175>NP_001191121 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 143 LIRVEG 148>NP_001119713 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 165 LIRVEG 170>NP_001191117 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 214 LIRVEG 219>NP_001119712 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 165 LIRVEG 170>NP_001119714 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 165 LIRVEG 170>NP_005418 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 214 LIRVEG 219>NP_001191116 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 214 LIRVEG 219>NP_001191115 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 214 LIRVEG 219>NP_001191119 Length = 506 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 165 LIRVEG 170>NP_001263627 Length = 182 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 35 LIRVEG 40>NP_001191113 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 214 LIRVEG 219>NP_001263628 Length = 187 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 35 LIRVEG 40>NP_001191118 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 165 LIRVEG 170>NP_001191120 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 165 LIRVEG 170>NP_001191114 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 214 LIRVEG 219>NP_001263626 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 35 LIRVEG 40>XP_005247903 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 264 LIRVEG 269>XP_005247901 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 247 LIRVEG 252>XP_005247900 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LIRVEG 9 LIRVEG Sbjct: 264 LIRVEG 269Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.154 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 383,972 Number of extensions: 581 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |