Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_776297 19 869 NP_001230301 19 869 NP_001820 19 869 NP_001230303 19 869 NP_068591 19 869 XP_005262783 19 869 NP_001821 18 1935 NP_001243873 18 1935 NP_542401 17 3301 NP_003949 16 5631 NP_898901 16 5631 NP_004876 16 5631 NP_001138228 16 5631 NP_444264 16 5631 NP_004652 16 5631 NP_001193856 16 5631 XP_006715306 16 5631 XP_006715305 16 5631 XP_006715304 16 5631 XP_006715067 16 5631 NP_000522 16 7355 NP_001243000 16 7355 NP_002039 16 7355 NP_653327 16 7355 NP_001186312 16 7355 NP_001186311 16 7355 NP_001186310 16 7355 NP_001186309 16 7355 NP_008985 16 7355 XP_006726568 16 7355 XP_005257603 16 7355 XP_006722058 16 7355 XP_005257602 16 7355 XP_006717420 16 7355 XP_005265883 16 7355 XP_005271926 16 7355 XP_006714589 16 7355 XP_005271925 16 7355 XP_006710277 16 7355 NP_071881 15 9605 NP_001188457 15 9605 NP_001188458 15 9605 NP_002585 15 9605 NP_009014 15 9605 NP_001177720 15 9605 NP_065984 15 9605 XP_006722870 15 9605 XP_005264538 15 9605 XP_005264537 15 9605 XP_006712136 15 9605>NP_776297 Length = 866 Score = 18.9 bits (37), Expect = 869 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GKWTLMM 7 GKWTLM+ Sbjct: 258 GKWTLMI 264>NP_001230301 Length = 791 Score = 18.9 bits (37), Expect = 869 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GKWTLMM 7 GKWTLM+ Sbjct: 258 GKWTLMI 264>NP_001820 Length = 818 Score = 18.9 bits (37), Expect = 869 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GKWTLMM 7 GKWTLM+ Sbjct: 258 GKWTLMI 264>NP_001230303 Length = 791 Score = 18.9 bits (37), Expect = 869 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GKWTLMM 7 GKWTLM+ Sbjct: 231 GKWTLMI 237>NP_068591 Length = 526 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKWTLMMAL 9 G+WTL+ AL Sbjct: 388 GQWTLLQAL 396>XP_005262783 Length = 839 Score = 18.9 bits (37), Expect = 869 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GKWTLMM 7 GKWTLM+ Sbjct: 231 GKWTLMI 237>NP_001821 Length = 760 Score = 17.7 bits (34), Expect = 1935 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GKWTLMM 7 GKWTL++ Sbjct: 200 GKWTLLI 206>NP_001243873 Length = 666 Score = 17.7 bits (34), Expect = 1935 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GKWTLMM 7 GKWTL++ Sbjct: 106 GKWTLLI 112>NP_542401 Length = 324 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KWTLMMAL 9 +WTLM+ L Sbjct: 18 RWTLMLLL 25>NP_003949 Length = 485 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GKWTLM 6 G+WT+M Sbjct: 72 GQWTIM 77>NP_898901 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GKWTLM 6 G+WT+M Sbjct: 72 GQWTIM 77>NP_004876 Length = 522 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 WTLMM 7 WTLMM Sbjct: 393 WTLMM 397>NP_001138228 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 WTLMM 7 WTLMM Sbjct: 294 WTLMM 298>NP_444264 Length = 420 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 WTLMM 7 WTLMM Sbjct: 291 WTLMM 295>NP_004652 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 GKWTLM 6 G WTLM Sbjct: 366 GAWTLM 371>NP_001193856 Length = 4707 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 WTLMMAL 9 WTL MA+ Sbjct: 3490 WTLAMAI 3496>XP_006715306 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GKWTLM 6 G+WT+M Sbjct: 72 GQWTIM 77>XP_006715305 Length = 418 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GKWTLM 6 G+WT+M Sbjct: 72 GQWTIM 77>XP_006715304 Length = 455 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GKWTLM 6 G+WT+M Sbjct: 72 GQWTIM 77>XP_006715067 Length = 4707 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 WTLMMAL 9 WTL MA+ Sbjct: 3490 WTLAMAI 3496>NP_000522 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 KWTLMMAL 9 KWT+M + Sbjct: 331 KWTIMAVM 338>NP_001243000 Length = 5207 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 WTLMMAL 9 W+LM+A+ Sbjct: 2683 WSLMLAI 2689>NP_002039 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GKWTLMMAL 9 G W +MAL Sbjct: 19 GAWLCLMAL 27>NP_653327 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GKWTLM 6 G+WT+M Sbjct: 508 GEWTVM 513>NP_001186312 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GKWTLM 6 G+WT+M Sbjct: 480 GEWTVM 485>NP_001186311 Length = 677 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GKWTLM 6 G+WT+M Sbjct: 494 GEWTVM 499>NP_001186310 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GKWTLM 6 G+WT+M Sbjct: 497 GEWTVM 502>NP_001186309 Length = 693 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GKWTLM 6 G+WT+M Sbjct: 510 GEWTVM 515>NP_008985 Length = 699 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 WTLMMA 8 WT++MA Sbjct: 550 WTMLMA 555>XP_006726568 Length = 142 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GKWTLMMA 8 G WTL+ A Sbjct: 21 GLWTLLWA 28>XP_005257603 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 WTLMMAL 9 W+LM+A+ Sbjct: 2732 WSLMLAI 2738>XP_006722058 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 WTLMMAL 9 W+LM+A+ Sbjct: 2732 WSLMLAI 2738>XP_005257602 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 WTLMMAL 9 W+LM+A+ Sbjct: 2732 WSLMLAI 2738>XP_006717420 Length = 142 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GKWTLMMA 8 G WTL+ A Sbjct: 21 GLWTLLWA 28>XP_005265883 Length = 679 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GKWTLM 6 G+WT+M Sbjct: 496 GEWTVM 501>XP_005271926 Length = 702 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 WTLMMA 8 WT++MA Sbjct: 553 WTMLMA 558>XP_006714589 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 WTLMMA 8 WT++MA Sbjct: 577 WTMLMA 582>XP_005271925 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 WTLMMA 8 WT++MA Sbjct: 577 WTMLMA 582>XP_006710277 Length = 142 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GKWTLMMA 8 G WTL+ A Sbjct: 21 GLWTLLWA 28>NP_071881 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 KWTLMMA 8 KW +M+A Sbjct: 460 KWQMMLA 466>NP_001188457 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 KWTLMM 7 +WTLM+ Sbjct: 567 EWTLML 572>NP_001188458 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 KWTLMM 7 +WTLM+ Sbjct: 551 EWTLML 556>NP_002585 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 KWTLMM 7 +WTLM+ Sbjct: 586 EWTLML 591>NP_009014 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 GKWTLMMA 8 G+W M+A Sbjct: 8 GRWRAMLA 15>NP_001177720 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 KWTLMM 7 KW+L+M Sbjct: 105 KWSLLM 110>NP_065984 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 KWTLMM 7 KW+L+M Sbjct: 137 KWSLLM 142>XP_006722870 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 KWTLMM 7 KW+L+M Sbjct: 137 KWSLLM 142>XP_005264538 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 KWTLMMA 8 KW +M+A Sbjct: 460 KWQMMLA 466>XP_005264537 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 KWTLMMA 8 KW +M+A Sbjct: 460 KWQMMLA 466>XP_006712136 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 KWTLMMA 8 KW +M+A Sbjct: 460 KWQMMLA 466Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.132 0.486 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 524,381 Number of extensions: 294 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |