Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 20 509 NP_444254 20 509 NP_444253 20 509 NP_444255 20 509 XP_005247551 20 509 XP_005247550 20 509 XP_006713712 20 509 XP_005247549 20 509 NP_003366 17 4312 NP_001171752 17 4312 NP_115560 17 4312 NP_002000 17 4312 NP_001171712 17 4312 XP_006718024 17 4312 XP_005271311 17 4312 XP_006711009 17 4312 XP_005271309 17 4312 XP_006711008 17 4312 NP_740754 16 5631 NP_061336 16 5631 NP_001243407 16 5631 NP_997198 16 5631 NP_001243406 16 5631 NP_005550 16 5631 NP_112578 16 7355 NP_001609 15 9605 NP_001073946 15 9605 NP_004456 15 9605 NP_001271427 15 9605 NP_006166 15 9605 NP_001248392 15 9605 NP_932326 15 9605 NP_689559 15 9605 NP_001191676 15 9605 NP_002904 15 9605 NP_001271428 15 9605 NP_659496 15 9605 NP_444509 15 9605 NP_001107592 15 9605 NP_775871 15 9605 XP_006721509 15 9605 XP_006721508 15 9605 XP_006721507 15 9605 XP_006721226 15 9605 XP_006721225 15 9605 XP_006721224 15 9605 XP_006719234 15 9605 XP_006718983 15 9605 XP_006718982 15 9605 XP_006718981 15 9605 XP_006718980 15 9605 XP_006718979 15 9605 XP_005269922 15 9605 XP_006717933 15 9605 XP_005269921 15 9605 XP_005272455 15 9605 XP_005248321 15 9605 XP_006714321 15 9605 XP_006714320 15 9605 XP_006714319 15 9605 NP_055416 15 9605 NP_079280 15 9605>NP_444256 Length = 1794 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GKVTGTQSI 9 GKVTGTQ I Sbjct: 1190 GKVTGTQPI 1198>NP_444254 Length = 1845 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GKVTGTQSI 9 GKVTGTQ I Sbjct: 1190 GKVTGTQPI 1198>NP_444253 Length = 1914 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GKVTGTQSI 9 GKVTGTQ I Sbjct: 1259 GKVTGTQPI 1267>NP_444255 Length = 1863 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GKVTGTQSI 9 GKVTGTQ I Sbjct: 1259 GKVTGTQPI 1267>XP_005247551 Length = 1855 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GKVTGTQSI 9 GKVTGTQ I Sbjct: 1200 GKVTGTQPI 1208>XP_005247550 Length = 1856 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GKVTGTQSI 9 GKVTGTQ I Sbjct: 1269 GKVTGTQPI 1277>XP_006713712 Length = 1923 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GKVTGTQSI 9 GKVTGTQ I Sbjct: 1269 GKVTGTQPI 1277>XP_005247549 Length = 1924 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GKVTGTQSI 9 GKVTGTQ I Sbjct: 1269 GKVTGTQPI 1277>NP_003366 Length = 294 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GKVTGT 6 GKVTGT Sbjct: 63 GKVTGT 68>NP_001171752 Length = 294 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GKVTGT 6 GKVTGT Sbjct: 63 GKVTGT 68>NP_115560 Length = 1194 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVTGTQS 8 KVTGTQ+ Sbjct: 215 KVTGTQA 221>NP_002000 Length = 194 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 GKV GTQ + Sbjct: 83 GKVKGTQEM 91>NP_001171712 Length = 309 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GKVTGT 6 GKVTGT Sbjct: 78 GKVTGT 83>XP_006718024 Length = 294 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GKVTGT 6 GKVTGT Sbjct: 63 GKVTGT 68>XP_005271311 Length = 1051 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVTGTQS 8 KVTGTQ+ Sbjct: 412 KVTGTQA 418>XP_006711009 Length = 1108 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVTGTQS 8 KVTGTQ+ Sbjct: 412 KVTGTQA 418>XP_005271309 Length = 1228 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVTGTQS 8 KVTGTQ+ Sbjct: 412 KVTGTQA 418>XP_006711008 Length = 1262 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KVTGTQS 8 KVTGTQ+ Sbjct: 412 KVTGTQA 418>NP_740754 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KVTGTQSI 9 K+TGTQ I Sbjct: 326 KMTGTQPI 333>NP_061336 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KVTGTQSI 9 K+TGTQ I Sbjct: 326 KMTGTQPI 333>NP_001243407 Length = 366 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 GK T TQS+ Sbjct: 264 GKTTVTQSV 272>NP_997198 Length = 449 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 GK T TQS+ Sbjct: 264 GKTTVTQSV 272>NP_001243406 Length = 409 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 GK T TQS+ Sbjct: 264 GKTTVTQSV 272>NP_005550 Length = 3075 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GKVTGTQS 8 GKVTG+ S Sbjct: 1440 GKVTGSAS 1447>NP_112578 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GKVTGTQSI 9 G+V GT+S+ Sbjct: 77 GQVLGTKSV 85>NP_001609 Length = 1014 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GKVTGT 6 GK+TGT Sbjct: 417 GKLTGT 422>NP_001073946 Length = 2699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KVTGTQSI 9 K+T TQSI Sbjct: 1019 KITMTQSI 1026>NP_004456 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GKVTGTQ 7 GKV+GT+ Sbjct: 96 GKVSGTK 102>NP_001271427 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G +TG QS+ Sbjct: 486 GSLTGLQSL 494>NP_006166 Length = 1695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 GK+ G QS+ Sbjct: 1282 GKLIGPQSV 1290>NP_001248392 Length = 1731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 GK+ G QS+ Sbjct: 1317 GKLIGPQSV 1325>NP_932326 Length = 1730 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 GK+ G QS+ Sbjct: 1317 GKLIGPQSV 1325>NP_689559 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G +TG QS+ Sbjct: 482 GSLTGLQSL 490>NP_001191676 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GKVTGTQS 8 GKVTG S Sbjct: 435 GKVTGNVS 442>NP_002904 Length = 1147 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GKVTGTQS 8 GKVTG S Sbjct: 435 GKVTGNVS 442>NP_001271428 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G +TG QS+ Sbjct: 345 GSLTGLQSL 353>NP_659496 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GKVTGTQSI 9 G+V GT+++ Sbjct: 859 GRVVGTEAL 867>NP_444509 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 GK+ G QSI Sbjct: 108 GKLEGFQSI 116>NP_001107592 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTGTQSI 9 +TGTQS+ Sbjct: 583 LTGTQSL 589>NP_775871 Length = 8384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G+VTGT + Sbjct: 5217 GEVTGTTGL 5225>XP_006721509 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G +TG QS+ Sbjct: 449 GSLTGLQSL 457>XP_006721508 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G +TG QS+ Sbjct: 482 GSLTGLQSL 490>XP_006721507 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G +TG QS+ Sbjct: 482 GSLTGLQSL 490>XP_006721226 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GKVTGTQSI 9 G+V GT+++ Sbjct: 531 GRVVGTEAL 539>XP_006721225 Length = 1057 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GKVTGTQSI 9 G+V GT+++ Sbjct: 832 GRVVGTEAL 840>XP_006721224 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GKVTGTQSI 9 G+V GT+++ Sbjct: 859 GRVVGTEAL 867>XP_006719234 Length = 175 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G+V G QS+ Sbjct: 9 GRVAGCQSL 17>XP_006718983 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G +TG QS+ Sbjct: 348 GDLTGIQSV 356>XP_006718982 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G +TG QS+ Sbjct: 348 GDLTGIQSV 356>XP_006718981 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G +TG QS+ Sbjct: 348 GDLTGIQSV 356>XP_006718980 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G +TG QS+ Sbjct: 348 GDLTGIQSV 356>XP_006718979 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G +TG QS+ Sbjct: 348 GDLTGIQSV 356>XP_005269922 Length = 1695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 GK+ G QS+ Sbjct: 1281 GKLIGPQSV 1289>XP_006717933 Length = 1696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 GK+ G QS+ Sbjct: 1282 GKLIGPQSV 1290>XP_005269921 Length = 1696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 GK+ G QS+ Sbjct: 1282 GKLIGPQSV 1290>XP_005272455 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 GK+ G QSI Sbjct: 108 GKLEGFQSI 116>XP_005248321 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GKVTGTQ 7 GKV+GT+ Sbjct: 96 GKVSGTK 102>XP_006714321 Length = 2713 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KVTGTQSI 9 K+T TQSI Sbjct: 1034 KITMTQSI 1041>XP_006714320 Length = 2720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KVTGTQSI 9 K+T TQSI Sbjct: 1034 KITMTQSI 1041>XP_006714319 Length = 2721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KVTGTQSI 9 K+T TQSI Sbjct: 1034 KITMTQSI 1041>NP_055416 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GKVTGTQSI 9 GKV GT + Sbjct: 241 GKVVGTPEV 249>NP_079280 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKVTGTQSI 9 G +TG QS+ Sbjct: 348 GDLTGIQSV 356Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.123 0.319 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 491,886 Number of extensions: 1106 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |