Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_009297 21 175 NP_001822 17 3301 XP_006716347 17 3301 NP_071737 17 4312 NP_878905 17 4312 NP_000311 17 4312 XP_006713354 17 4312 XP_005265446 17 4312 XP_005265445 17 4312 NP_001128350 17 4312 NP_001193928 16 5631 NP_004236 16 5631 NP_963925 16 5631 NP_009105 16 5631 XP_005253886 16 5631 XP_006719269 16 5631 NP_001035351 16 7355 NP_001035350 16 7355 NP_078792 16 7355 NP_066267 16 7355 NP_001261 16 7355 NP_001172029 16 7355 NP_694995 16 7355 NP_001186224 16 7355 NP_006718 16 7355 NP_001172028 16 7355 NP_001074003 16 7355 NP_001762 16 7355 NP_001172030 16 7355 XP_006726435 16 7355 XP_005276248 16 7355 XP_003960174 16 7355 XP_006723191 16 7355 XP_005254452 16 7355 XP_005254451 16 7355 XP_006717852 16 7355 XP_006717851 16 7355 XP_006717850 16 7355 XP_006717849 16 7355 XP_006717848 16 7355 XP_006717847 16 7355 XP_006717846 16 7355 XP_006717845 16 7355 XP_005271924 16 7355 XP_005271923 16 7355 XP_005262843 16 7355 XP_005262842 16 7355 XP_006711782 16 7355 XP_005245759 16 7355 XP_003846539 16 7355 NP_001017975 15 9605 NP_932327 15 9605 NP_003860 15 9605 NP_001035364 15 9605 NP_060903 15 9605 NP_001140160 15 9605 NP_065922 15 9605 NP_055565 15 9605 NP_078800 15 9605 NP_001139487 15 9605 NP_001230892 15 9605 NP_997221 15 9605 XP_006724787 15 9605 XP_006720493 15 9605 XP_005272460 15 9605 XP_006713805 15 9605 XP_005269417 15 9605 XP_005269415 15 9605 XP_005269414 15 9605>NP_009297 Length = 1149 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GKVLGDQKR 9 GKVLGDQ+R Sbjct: 6 GKVLGDQRR 14>NP_001822 Length = 449 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GKVLGDQ 7 G+VLGDQ Sbjct: 18 GQVLGDQ 24>XP_006716347 Length = 501 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GKVLGDQ 7 G+VLGDQ Sbjct: 70 GQVLGDQ 76>NP_071737 Length = 725 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGDQKR 9 LGDQKR Sbjct: 282 LGDQKR 287>NP_878905 Length = 790 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGDQKR 9 LGDQKR Sbjct: 282 LGDQKR 287>NP_000311 Length = 244 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GKVLGDQK 8 GK+LG++K Sbjct: 72 GKLLGEEK 79>XP_006713354 Length = 748 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGDQKR 9 LGDQKR Sbjct: 240 LGDQKR 245>XP_005265446 Length = 758 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGDQKR 9 LGDQKR Sbjct: 315 LGDQKR 320>XP_005265445 Length = 823 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGDQKR 9 LGDQKR Sbjct: 315 LGDQKR 320>NP_001128350 Length = 790 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGDQKR 9 LGDQKR Sbjct: 282 LGDQKR 287>NP_001193928 Length = 2069 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GKVLGDQK 8 GK+L +QK Sbjct: 799 GKILSEQK 806>NP_004236 Length = 638 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GKVLGDQKR 9 G++LG++K+ Sbjct: 240 GRILGNKKK 248>NP_963925 Length = 720 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GKVLGDQKR 9 G++LG++K+ Sbjct: 322 GRILGNKKK 330>NP_009105 Length = 2027 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GKVLGDQK 8 GK+L +QK Sbjct: 757 GKILSEQK 764>XP_005253886 Length = 1545 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GKVLGDQK 8 GK+L +QK Sbjct: 291 GKILSEQK 298>XP_006719269 Length = 2054 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GKVLGDQK 8 GK+L +QK Sbjct: 799 GKILSEQK 806>NP_001035351 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GKVLGD 6 GKV+GD Sbjct: 414 GKVIGD 419>NP_001035350 Length = 766 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GKVLGD 6 GKV+GD Sbjct: 397 GKVIGD 402>NP_078792 Length = 254 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KVLGDQKR 9 KVL D KR Sbjct: 203 KVLSDMKR 210>NP_066267 Length = 4377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KVLGDQKR 9 KVLG+Q++ Sbjct: 3845 KVLGEQQK 3852>NP_001261 Length = 1710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KVLGDQKR 9 K+LG +KR Sbjct: 204 KILGQKKR 211>NP_001172029 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVLGDQKR 9 GKV +QKR Sbjct: 83 GKVPSEQKR 91>NP_694995 Length = 627 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GKVLGDQKR 9 GKV QKR Sbjct: 522 GKVFSHQKR 530>NP_001186224 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GKVLGDQKR 9 GKV QKR Sbjct: 535 GKVFSHQKR 543>NP_006718 Length = 788 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVLGDQKR 9 GK+L QKR Sbjct: 46 GKILHRQKR 54>NP_001172028 Length = 759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVLGDQKR 9 GKV +QKR Sbjct: 83 GKVPSEQKR 91>NP_001074003 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVLGDQKR 9 G LGD+KR Sbjct: 2091 GPNLGDKKR 2099>NP_001762 Length = 847 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVLGDQKR 9 GKV +QKR Sbjct: 83 GKVPSEQKR 91>NP_001172030 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVLGDQKR 9 GKV +QKR Sbjct: 83 GKVPSEQKR 91>XP_006726435 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GKVLGDQKR 9 G++LG Q+R Sbjct: 52 GRLLGAQRR 60>XP_005276248 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GKVLGDQKR 9 G++LG Q+R Sbjct: 2 GRLLGAQRR 10>XP_003960174 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GKVLGDQKR 9 G++LG Q+R Sbjct: 77 GRLLGAQRR 85>XP_006723191 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GKVLGDQKR 9 GKV QKR Sbjct: 513 GKVFSHQKR 521>XP_005254452 Length = 2188 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVLGDQKR 9 G LGD+KR Sbjct: 2065 GPNLGDKKR 2073>XP_005254451 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKVLGDQKR 9 G LGD+KR Sbjct: 2091 GPNLGDKKR 2099>XP_006717852 Length = 3508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KVLGDQKR 9 KVLG+Q++ Sbjct: 2976 KVLGEQQK 2983>XP_006717851 Length = 3513 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KVLGDQKR 9 KVLG+Q++ Sbjct: 2981 KVLGEQQK 2988>XP_006717850 Length = 4364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KVLGDQKR 9 KVLG+Q++ Sbjct: 3832 KVLGEQQK 3839>XP_006717849 Length = 4383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KVLGDQKR 9 KVLG+Q++ Sbjct: 3851 KVLGEQQK 3858>XP_006717848 Length = 4392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KVLGDQKR 9 KVLG+Q++ Sbjct: 3860 KVLGEQQK 3867>XP_006717847 Length = 4395 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KVLGDQKR 9 KVLG+Q++ Sbjct: 3863 KVLGEQQK 3870>XP_006717846 Length = 4396 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KVLGDQKR 9 KVLG+Q++ Sbjct: 3864 KVLGEQQK 3871>XP_006717845 Length = 4397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KVLGDQKR 9 KVLG+Q++ Sbjct: 3865 KVLGEQQK 3872>XP_005271924 Length = 1710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KVLGDQKR 9 K+LG +KR Sbjct: 204 KILGQKKR 211>XP_005271923 Length = 1798 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KVLGDQKR 9 K+LG +KR Sbjct: 204 KILGQKKR 211>XP_005262843 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GKVLGD 6 GKV+GD Sbjct: 396 GKVIGD 401>XP_005262842 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GKVLGD 6 GKV+GD Sbjct: 413 GKVIGD 418>XP_006711782 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GKVLGDQKR 9 G++LG Q+R Sbjct: 52 GRLLGAQRR 60>XP_005245759 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GKVLGDQKR 9 G++LG Q+R Sbjct: 2 GRLLGAQRR 10>XP_003846539 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GKVLGDQKR 9 G++LG Q+R Sbjct: 77 GRLLGAQRR 85>NP_001017975 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KVLGDQKR 9 K+LG +KR Sbjct: 59 KLLGQEKR 66>NP_932327 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GKVLGDQKR 9 G+ LG+Q+R Sbjct: 44 GQPLGEQQR 52>NP_003860 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GKVLGDQKR 9 G+ LG+Q+R Sbjct: 44 GQPLGEQQR 52>NP_001035364 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LGDQKR 9 LGDQ+R Sbjct: 286 LGDQRR 291>NP_060903 Length = 1321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KVLGDQKR 9 + LGDQ+R Sbjct: 132 RFLGDQQR 139>NP_001140160 Length = 1321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KVLGDQKR 9 + LGDQ+R Sbjct: 132 RFLGDQQR 139>NP_065922 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LGDQKR 9 LGD+KR Sbjct: 447 LGDEKR 452>NP_055565 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VLGDQKR 9 +LGDQ++ Sbjct: 85 ILGDQRK 91>NP_078800 Length = 1226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVLGDQK 8 +VLGD+K Sbjct: 640 RVLGDRK 646>NP_001139487 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VLGDQKR 9 +LGDQ++ Sbjct: 85 ILGDQRK 91>NP_001230892 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LGDQKR 9 LGD+KR Sbjct: 447 LGDEKR 452>NP_997221 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GKVLGDQ 7 GKVLG++ Sbjct: 75 GKVLGNE 81>XP_006724787 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LGDQKR 9 LGD+KR Sbjct: 283 LGDEKR 288>XP_006720493 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GKVLGDQ 7 GKVLG++ Sbjct: 75 GKVLGNE 81>XP_005272460 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GKVLGD 6 GK+LGD Sbjct: 254 GKLLGD 259>XP_006713805 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVLGDQK 8 +VLGD+K Sbjct: 458 RVLGDRK 464>XP_005269417 Length = 1104 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVLGDQK 8 +VLGD+K Sbjct: 640 RVLGDRK 646>XP_005269415 Length = 1229 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVLGDQK 8 +VLGD+K Sbjct: 613 RVLGDRK 619>XP_005269414 Length = 1256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVLGDQK 8 +VLGD+K Sbjct: 640 RVLGDRK 646Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.142 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 651,246 Number of extensions: 1288 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |