Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 19 869 XP_006718908 19 869 XP_005271621 19 869 XP_006718907 19 869 XP_006718906 19 869 XP_005271619 19 869 XP_005271618 19 869 NP_149100 18 1935 XP_005264686 18 1935 NP_073754 17 3301 NP_001264994 16 7355 NP_001264995 16 7355 NP_001264996 16 7355 NP_001264993 16 7355 NP_055144 16 7355 XP_006715531 16 7355 XP_006715530 16 7355 NP_056529 15 9605 NP_002705 15 9605 XP_006726166 15 9605 XP_006726165 15 9605 XP_006726164 15 9605 XP_006726163 15 9605 XP_006726071 15 9605 XP_006726070 15 9605 XP_006726069 15 9605 XP_006726068 15 9605 XP_006725978 15 9605 XP_006725977 15 9605 XP_006725976 15 9605 XP_006725975 15 9605 XP_006725886 15 9605 XP_006725885 15 9605 XP_006725884 15 9605 XP_006725883 15 9605 XP_006725769 15 9605 XP_006725768 15 9605 XP_006725767 15 9605 XP_006725766 15 9605 XP_006725555 15 9605 XP_006725554 15 9605 XP_006725553 15 9605 XP_006725552 15 9605 XP_006715196 15 9605 XP_006715195 15 9605 XP_006715194 15 9605 XP_006715193 15 9605>NP_000042 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GIMVKL VN Sbjct: 1642 GIMVKLVVN 1650>XP_006718908 Length = 1708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GIMVKL VN Sbjct: 294 GIMVKLVVN 302>XP_005271621 Length = 2708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GIMVKL VN Sbjct: 1294 GIMVKLVVN 1302>XP_006718907 Length = 3050 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GIMVKL VN Sbjct: 1636 GIMVKLVVN 1644>XP_006718906 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GIMVKL VN Sbjct: 1642 GIMVKLVVN 1650>XP_005271619 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GIMVKL VN Sbjct: 1642 GIMVKLVVN 1650>XP_005271618 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GIMVKL VN Sbjct: 1642 GIMVKLVVN 1650>NP_149100 Length = 783 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 G+MVKL+ N Sbjct: 693 GVMVKLYPN 701>XP_005264686 Length = 703 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 G+MVKL+ N Sbjct: 613 GVMVKLYPN 621>NP_073754 Length = 951 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IMVKLFVN 9 +MV LFVN Sbjct: 837 VMVNLFVN 844>NP_001264994 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIMVKLFV 8 GI+V LFV Sbjct: 603 GILVTLFV 610>NP_001264995 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIMVKLFV 8 GI+V LFV Sbjct: 603 GILVTLFV 610>NP_001264996 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIMVKLFV 8 GI+V LFV Sbjct: 603 GILVTLFV 610>NP_001264993 Length = 1194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIMVKLFV 8 GI+V LFV Sbjct: 603 GILVTLFV 610>NP_055144 Length = 1401 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GIMVKLF 7 G+++KLF Sbjct: 503 GVLIKLF 509>XP_006715531 Length = 1029 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIMVKLFV 8 GI+V LFV Sbjct: 603 GILVTLFV 610>XP_006715530 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIMVKLFV 8 GI+V LFV Sbjct: 603 GILVTLFV 610>NP_056529 Length = 103 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIMVKLFV 8 G MVKL+V Sbjct: 21 GKMVKLYV 28>NP_002705 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006726166 Length = 910 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006726165 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006726164 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006726163 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006726071 Length = 910 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006726070 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006726069 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006726068 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725978 Length = 910 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725977 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725976 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725975 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725886 Length = 910 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725885 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725884 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725883 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725769 Length = 910 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725768 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725767 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725766 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725555 Length = 910 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725554 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725553 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006725552 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006715196 Length = 910 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006715195 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006715194 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500>XP_006715193 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMVKLFVN 9 GI+ +LF+N Sbjct: 492 GILQELFLN 500Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.340 0.156 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 294,027 Number of extensions: 424 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |