Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 390 XP_006718908 20 390 XP_005271621 20 390 XP_006718907 20 390 XP_006718906 20 390 XP_005271619 20 390 XP_005271618 20 390 NP_055907 20 509 XP_005255242 20 509 XP_005255241 20 509 XP_005255240 20 509 XP_005255239 20 509 NP_004455 18 1135 NP_002926 18 1935 NP_001175 17 3301 NP_071398 17 3301 NP_116277 17 4312 XP_006717373 17 4312 XP_006717372 17 4312 XP_006717371 17 4312 NP_002854 16 5631 NP_001157412 16 5631 NP_115553 16 5631 NP_075391 16 7355 NP_002553 16 7355 NP_001138585 16 7355 NP_689571 16 7355 NP_065828 16 7355 XP_006726267 16 7355 XP_005276792 16 7355 XP_006723071 16 7355 XP_006723070 16 7355 XP_005248044 16 7355 XP_006711553 16 7355 XP_005245516 16 7355 NP_112552 15 9605 NP_112553 15 9605 NP_002131 15 9605 NP_000082 15 9605 NP_006728 15 9605 NP_001924 15 9605 NP_001229796 15 9605 NP_060440 15 9605 NP_078928 15 9605 NP_116038 15 9605 XP_005255036 15 9605 XP_006720249 15 9605 XP_005252023 15 9605 XP_005252022 15 9605 XP_005252020 15 9605 XP_005252021 15 9605 XP_005252018 15 9605 XP_005252017 15 9605 XP_005246337 15 9605 XP_005246336 15 9605 XP_006712308 15 9605 XP_006712307 15 9605 XP_005246334 15 9605 XP_005246333 15 9605 XP_005246332 15 9605 NP_808881 15 9605>NP_000042 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 GI GVEGVF Sbjct: 2919 GITGVEGVF 2927>XP_006718908 Length = 1708 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 GI GVEGVF Sbjct: 1571 GITGVEGVF 1579>XP_005271621 Length = 2708 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 GI GVEGVF Sbjct: 2571 GITGVEGVF 2579>XP_006718907 Length = 3050 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 GI GVEGVF Sbjct: 2913 GITGVEGVF 2921>XP_006718906 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 GI GVEGVF Sbjct: 2919 GITGVEGVF 2927>XP_005271619 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 GI GVEGVF Sbjct: 2919 GITGVEGVF 2927>XP_005271618 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 GI GVEGVF Sbjct: 2919 GITGVEGVF 2927>NP_055907 Length = 3661 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 G+ GVEGVF Sbjct: 2384 GVTGVEGVF 2392>XP_005255242 Length = 3609 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 G+ GVEGVF Sbjct: 2332 GVTGVEGVF 2340>XP_005255241 Length = 3637 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 G+ GVEGVF Sbjct: 2360 GVTGVEGVF 2368>XP_005255240 Length = 3663 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 G+ GVEGVF Sbjct: 2386 GVTGVEGVF 2394>XP_005255239 Length = 3689 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 G+ GVEGVF Sbjct: 2412 GVTGVEGVF 2420>NP_004455 Length = 268 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 GI+G+ GVF Sbjct: 129 GIVGIRGVF 137>NP_002926 Length = 160 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GIMGVEG 7 G+MGVEG Sbjct: 17 GLMGVEG 23>NP_001175 Length = 2644 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GIMGVEGVF 9 G MG EG+F Sbjct: 2524 GPMGTEGLF 2532>NP_071398 Length = 1507 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIMGVEGVF 9 G+ GVEGV+ Sbjct: 259 GMSGVEGVW 267>NP_116277 Length = 1860 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+MG EG+ Sbjct: 1565 GLMGKEGI 1572>XP_006717373 Length = 1087 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+MG EG+ Sbjct: 792 GLMGKEGI 799>XP_006717372 Length = 1842 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+MG EG+ Sbjct: 1547 GLMGKEGI 1554>XP_006717371 Length = 1842 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+MG EG+ Sbjct: 1547 GLMGKEGI 1554>NP_002854 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 GI+GVE V Sbjct: 18 GIVGVENV 25>NP_001157412 Length = 813 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 GI+GVE V Sbjct: 18 GIVGVENV 25>NP_115553 Length = 394 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIMGVEG 7 GI+G+EG Sbjct: 135 GILGMEG 141>NP_075391 Length = 1042 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G++G +GV Sbjct: 156 GVLGADGV 163>NP_002553 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIMGVE 6 GIMG+E Sbjct: 250 GIMGIE 255>NP_001138585 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GIMGVEGVF 9 G GV+G F Sbjct: 45 GFAGVQGTF 53>NP_689571 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IMGVEGVF 9 +MG+EG F Sbjct: 57 LMGMEGPF 64>NP_065828 Length = 1159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IMGVEGVF 9 + GV+GVF Sbjct: 448 VRGVKGVF 455>XP_006726267 Length = 1053 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G++G +GV Sbjct: 101 GVLGADGV 108>XP_005276792 Length = 1108 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G++G +GV Sbjct: 156 GVLGADGV 163>XP_006723071 Length = 214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IMGVEGVF 9 +MG+EG F Sbjct: 57 LMGMEGPF 64>XP_006723070 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IMGVEGVF 9 +MG+EG F Sbjct: 57 LMGMEGPF 64>XP_005248044 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IMGVEGVF 9 + GV+GVF Sbjct: 298 VRGVKGVF 305>XP_006711553 Length = 1053 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G++G +GV Sbjct: 101 GVLGADGV 108>XP_005245516 Length = 1108 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G++G +GV Sbjct: 156 GVLGADGV 163>NP_112552 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIMGVEG 7 GI+GV+G Sbjct: 158 GIIGVKG 164>NP_112553 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIMGVEG 7 GI+GV+G Sbjct: 158 GIIGVKG 164>NP_002131 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIMGVEG 7 GI+GV+G Sbjct: 158 GIIGVKG 164>NP_000082 Length = 1670 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+MG +G+ Sbjct: 321 GLMGEDGI 328>NP_006728 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GVEGVF 9 G+EGVF Sbjct: 450 GLEGVF 455>NP_001924 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IMGVEGVF 9 I+G+ G+F Sbjct: 393 ILGMHGIF 400>NP_001229796 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GVEGVF 9 G+EGVF Sbjct: 433 GLEGVF 438>NP_060440 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+M ++GV Sbjct: 230 GLMNIDGV 237>NP_078928 Length = 2015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GIMGVEG 7 G +GVEG Sbjct: 1420 GALGVEG 1426>NP_116038 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IMGVEGVF 9 I G+EG F Sbjct: 349 IHGIEGAF 356>XP_005255036 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GIMGVEG 7 G +GVEG Sbjct: 715 GALGVEG 721>XP_006720249 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+M ++GV Sbjct: 230 GLMNIDGV 237>XP_005252023 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIMGVEG 7 GI+GV+G Sbjct: 134 GIIGVKG 140>XP_005252022 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIMGVEG 7 GI+GV+G Sbjct: 134 GIIGVKG 140>XP_005252020 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIMGVEG 7 GI+GV+G Sbjct: 134 GIIGVKG 140>XP_005252021 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIMGVEG 7 GI+GV+G Sbjct: 134 GIIGVKG 140>XP_005252018 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIMGVEG 7 GI+GV+G Sbjct: 158 GIIGVKG 164>XP_005252017 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIMGVEG 7 GI+GV+G Sbjct: 158 GIIGVKG 164>XP_005246337 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+MG +G+ Sbjct: 321 GLMGEDGI 328>XP_005246336 Length = 1075 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+MG +G+ Sbjct: 321 GLMGEDGI 328>XP_006712308 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+MG +G+ Sbjct: 321 GLMGEDGI 328>XP_006712307 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+MG +G+ Sbjct: 321 GLMGEDGI 328>XP_005246334 Length = 1635 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+MG +G+ Sbjct: 321 GLMGEDGI 328>XP_005246333 Length = 1637 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+MG +G+ Sbjct: 321 GLMGEDGI 328>XP_005246332 Length = 1639 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIMGVEGV 8 G+MG +G+ Sbjct: 321 GLMGEDGI 328>NP_808881 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GVEGVF 9 G+EGVF Sbjct: 369 GLEGVF 374Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.160 0.480 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 512,499 Number of extensions: 968 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |