Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 22 103 NP_055144 19 869 NP_065768 17 2528 XP_006724654 17 2528 XP_006724653 17 2528 NP_002537 17 3301 NP_060139 17 4312 NP_000220 17 4312 NP_848537 16 5631 NP_113659 16 5631 NP_006784 16 5631 NP_054817 16 5631 NP_001129711 16 5631 NP_942581 16 5631 NP_060200 16 5631 XP_005276776 16 5631 XP_005262564 16 5631 XP_006718768 16 5631 XP_006718767 16 5631 XP_006718766 16 5631 XP_005272185 16 5631 XP_006713275 16 5631 XP_005265305 16 5631 XP_006710324 16 5631 NP_001231612 16 7355 NP_000912 16 7355 NP_004887 16 7355 NP_001030337 16 7355 NP_062823 16 7355 NP_940967 16 7355 XP_006723348 16 7355 XP_006723347 16 7355 XP_006719150 16 7355 XP_006719149 16 7355 NP_009011 16 7355 NP_085130 15 9605 NP_116216 15 9605 NP_001191006 15 9605 NP_004779 15 9605 NP_056140 15 9605 NP_536354 15 9605 NP_940852 15 9605 XP_005262137 15 9605 XP_005266053 15 9605 XP_005266052 15 9605 XP_005266051 15 9605 XP_006712185 15 9605 XP_005264680 15 9605 XP_006712184 15 9605>NP_004295 Length = 1620 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GHMNMAFSQ 9 GH+NMAFSQ Sbjct: 1474 GHVNMAFSQ 1482>NP_055144 Length = 1401 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GHMNMAFSQ 9 GH+N AF Q Sbjct: 1275 GHLNQAFQQ 1283>NP_065768 Length = 1493 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GHMNMAFSQ 9 GH N FSQ Sbjct: 338 GHQNCEFSQ 346>XP_006724654 Length = 1335 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GHMNMAFSQ 9 GH N FSQ Sbjct: 180 GHQNCEFSQ 188>XP_006724653 Length = 1377 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GHMNMAFSQ 9 GH N FSQ Sbjct: 222 GHQNCEFSQ 230>NP_002537 Length = 401 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GHMNMAFSQ 9 GH N+ F Q Sbjct: 286 GHANLTFEQ 294>NP_060139 Length = 1250 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GHMNMAFSQ 9 GH + FSQ Sbjct: 476 GHQTLVFSQ 484>NP_000220 Length = 440 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HMNMAFS 8 H+NM FS Sbjct: 401 HLNMVFS 407>NP_848537 Length = 667 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HMNMAFS 8 H+N+AFS Sbjct: 616 HINVAFS 622>NP_113659 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HMNMAFS 8 H+N+AFS Sbjct: 612 HINVAFS 618>NP_006784 Length = 256 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GHMNMA 6 GHMN+A Sbjct: 154 GHMNIA 159>NP_054817 Length = 238 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GHMNMA 6 GHMN+A Sbjct: 136 GHMNIA 141>NP_001129711 Length = 595 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GHMNMAFSQ 9 GH + +FSQ Sbjct: 504 GHCSQSFSQ 512>NP_942581 Length = 776 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HMNMAFSQ 9 HM +AFS+ Sbjct: 642 HMKLAFSK 649>NP_060200 Length = 776 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HMNMAFSQ 9 HM +AFS+ Sbjct: 642 HMKLAFSK 649>XP_005276776 Length = 991 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GHMNMA 6 GH+NMA Sbjct: 270 GHINMA 275>XP_005262564 Length = 991 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GHMNMA 6 GH+NMA Sbjct: 270 GHINMA 275>XP_006718768 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HMNMAFS 8 H+N+AFS Sbjct: 432 HINVAFS 438>XP_006718767 Length = 616 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HMNMAFS 8 H+N+AFS Sbjct: 565 HINVAFS 571>XP_006718766 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HMNMAFS 8 H+N+AFS Sbjct: 612 HINVAFS 618>XP_005272185 Length = 595 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GHMNMAFSQ 9 GH + +FSQ Sbjct: 504 GHCSQSFSQ 512>XP_006713275 Length = 776 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HMNMAFSQ 9 HM +AFS+ Sbjct: 642 HMKLAFSK 649>XP_005265305 Length = 776 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HMNMAFSQ 9 HM +AFS+ Sbjct: 642 HMKLAFSK 649>XP_006710324 Length = 943 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GHMNMA 6 GH+NMA Sbjct: 222 GHINMA 227>NP_001231612 Length = 819 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GHMNMAFSQ 9 GHM FS+ Sbjct: 475 GHMGYVFSK 483>NP_000912 Length = 1141 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GHMNMAFSQ 9 GHM FS+ Sbjct: 797 GHMGYVFSK 805>NP_004887 Length = 327 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GHMNMAFSQ 9 G +N+AF Q Sbjct: 50 GKVNLAFKQ 58>NP_001030337 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GHMNMAFSQ 9 G +N+AF Q Sbjct: 50 GKVNLAFKQ 58>NP_062823 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GHMNMAFSQ 9 GH+ +AF Q Sbjct: 232 GHLALAFLQ 240>NP_940967 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HMNMAFS 8 H+N+AF+ Sbjct: 209 HLNLAFN 215>XP_006723348 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GHMNMAFSQ 9 GH+ +AF Q Sbjct: 103 GHLALAFLQ 111>XP_006723347 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GHMNMAFSQ 9 GH+ +AF Q Sbjct: 232 GHLALAFLQ 240>XP_006719150 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GHMNMAFSQ 9 GHM FS+ Sbjct: 479 GHMGYVFSK 487>XP_006719149 Length = 1087 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GHMNMAFSQ 9 GHM FS+ Sbjct: 797 GHMGYVFSK 805>NP_009011 Length = 80 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GHMNMAFSQ 9 G+MN+A Q Sbjct: 39 GYMNIALEQ 47>NP_085130 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HMNMAFSQ 9 H N AF+Q Sbjct: 263 HRNAAFNQ 270>NP_116216 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HMNMAFSQ 9 H N++FS+ Sbjct: 294 HSNLSFSE 301>NP_001191006 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GHMNMAFS 8 G+M MAFS Sbjct: 958 GNMIMAFS 965>NP_004779 Length = 1073 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GHMNMAFS 8 G+M MAFS Sbjct: 965 GNMIMAFS 972>NP_056140 Length = 2266 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GHMNMAFS 8 GH N+A++ Sbjct: 2154 GHANIAYT 2161>NP_536354 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HMNMAFS 8 H+N AFS Sbjct: 80 HLNPAFS 86>NP_940852 Length = 268 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 GHMNMAFS 8 GH+ M F+ Sbjct: 59 GHLQMGFA 66>XP_005262137 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 GHMNMAFS 8 GH+ M F+ Sbjct: 59 GHLQMGFA 66>XP_005266053 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HMNMAFSQ 9 H N AF+Q Sbjct: 263 HRNAAFNQ 270>XP_005266052 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HMNMAFSQ 9 H N AF+Q Sbjct: 263 HRNAAFNQ 270>XP_005266051 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HMNMAFSQ 9 H N AF+Q Sbjct: 263 HRNAAFNQ 270>XP_006712185 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HMNMAFSQ 9 H N++FS+ Sbjct: 294 HSNLSFSE 301>XP_005264680 Length = 349 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HMNMAFSQ 9 H N++FS+ Sbjct: 294 HSNLSFSE 301>XP_006712184 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HMNMAFSQ 9 H N++FS+ Sbjct: 294 HSNLSFSE 301Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.124 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 420,937 Number of extensions: 809 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |